RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 FAM9AQ8IZU1 332 aaPredicted RBP7.47□□□□□ -1.21
MATR3-202ENST00000502422 KIF21BO75037 1637 aa7.46□□□□□ -1.21
MATR3-202ENST00000502422 CFAP43Q8NDM7 1665 aa7.46□□□□□ -1.22
MATR3-202ENST00000502422 MAGI3Q5TCQ9 1506 aa7.45□□□□□ -1.22
MATR3-202ENST00000502422 UGGT2Q9NYU1 1516 aa7.45□□□□□ -1.22
MATR3-202ENST00000502422 KIAA0556O60303 1618 aa7.44□□□□□ -1.22
MATR3-202ENST00000502422 ARID4BQ4LE39 1312 aaPredicted RBP7.44□□□□□ -1.22
MATR3-202ENST00000502422 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
MATR3-202ENST00000502422 RAPGEF2Q9Y4G8 1499 aa7.44□□□□□ -1.22
MATR3-202ENST00000502422 PTPRMP28827 1452 aa7.43□□□□□ -1.22
MATR3-202ENST00000502422 PELP1Q8IZL8 1130 aaKnown RBP7.41□□□□□ -1.22
MATR3-202ENST00000502422 ARAP3Q8WWN8 1544 aa7.41□□□□□ -1.22
MATR3-202ENST00000502422 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
MATR3-202ENST00000502422 GOLGA3Q08378 1498 aa7.41□□□□□ -1.22
MATR3-202ENST00000502422 RAPGEF3O95398 923 aa7.4□□□□□ -1.22
MATR3-202ENST00000502422 MKRN4PQ13434 485 aaPredicted RBP7.4□□□□□ -1.23
MATR3-202ENST00000502422 HRCP23327 699 aa7.39□□□□□ -1.23
MATR3-202ENST00000502422 PTPRTO14522 1441 aa7.39□□□□□ -1.23
MATR3-202ENST00000502422 HSPA2P54652 639 aa7.38□□□□□ -1.23
MATR3-202ENST00000502422 POLA2Q14181 598 aa7.38□□□□□ -1.23
MATR3-202ENST00000502422 ABCA8O94911 1581 aa7.38□□□□□ -1.23
MATR3-202ENST00000502422 CTTNBP2Q8WZ74 1663 aa7.38□□□□□ -1.23
MATR3-202ENST00000502422 BCORL1Q5H9F3 1711 aa7.37□□□□□ -1.23
MATR3-202ENST00000502422 MADDQ8WXG6 1647 aa7.37□□□□□ -1.23
MATR3-202ENST00000502422 P3H3Q8IVL6 736 aa7.36□□□□□ -1.23
MATR3-202ENST00000502422 RIMS1Q86UR5 1692 aaKnown RBP7.35□□□□□ -1.23
MATR3-202ENST00000502422 NEO1Q92859 1461 aa7.34□□□□□ -1.23
MATR3-202ENST00000502422 POGZQ7Z3K3 1410 aa7.34□□□□□ -1.23
MATR3-202ENST00000502422 ATP10BO94823 1461 aa7.34□□□□□ -1.23
MATR3-202ENST00000502422 ABCA9Q8IUA7 1624 aa7.34□□□□□ -1.23
MATR3-202ENST00000502422 HAX1O00165 279 aa7.33□□□□□ -1.24
MATR3-202ENST00000502422 ABCB7O75027 752 aa7.32□□□□□ -1.24
MATR3-202ENST00000502422 MLECQ14165 292 aa7.32□□□□□ -1.24
MATR3-202ENST00000502422 YEATS2Q9ULM3 1422 aa7.32□□□□□ -1.24
MATR3-202ENST00000502422 FANCAO15360 1455 aa7.31□□□□□ -1.24
MATR3-202ENST00000502422 DENND4BO75064 1496 aaPredicted RBP7.31□□□□□ -1.24
MATR3-202ENST00000502422 PLEKHD1A6NEE1 506 aa7.31□□□□□ -1.24
MATR3-202ENST00000502422 PREX1Q8TCU6 1659 aa7.31□□□□□ -1.24
MATR3-202ENST00000502422 LHX8Q68G74 356 aa7.3□□□□□ -1.24
MATR3-202ENST00000502422 AKNAQ7Z591 1439 aa7.3□□□□□ -1.24
MATR3-202ENST00000502422 FRMPD1Q5SYB0 1578 aa7.3□□□□□ -1.24
MATR3-202ENST00000502422 ARHGEF40Q8TER5 1519 aa7.29□□□□□ -1.24
MATR3-202ENST00000502422 TTC37Q6PGP7 1564 aa7.29□□□□□ -1.24
MATR3-202ENST00000502422 SPDYE4A6NLX3 237 aa7.29□□□□□ -1.24
MATR3-202ENST00000502422 RANGAP1P46060 587 aaPredicted RBP7.29□□□□□ -1.24
MATR3-202ENST00000502422 RAPGEF6Q8TEU7 1601 aa7.28□□□□□ -1.24
MATR3-202ENST00000502422 RICTORQ6R327 1708 aa7.27□□□□□ -1.24
MATR3-202ENST00000502422 FER1L4A9Z1Z3 1794 aa7.27□□□□□ -1.25
MATR3-202ENST00000502422 CFAP74Q9C0B2 1584 aa7.27□□□□□ -1.25
MATR3-202ENST00000502422 EFCAB5A4FU69 1503 aa7.27□□□□□ -1.25
MATR3-202ENST00000502422 FHOD3Q2V2M9 1422 aa7.27□□□□□ -1.25
MATR3-202ENST00000502422 ZFYVE16Q7Z3T8 1539 aa7.26□□□□□ -1.25
MATR3-202ENST00000502422 MAGI2Q86UL8 1455 aa7.26□□□□□ -1.25
MATR3-202ENST00000502422 PRXQ9BXM0 1461 aa7.26□□□□□ -1.25
MATR3-202ENST00000502422 CEBPAP49715 358 aaPredicted RBP7.26□□□□□ -1.25
MATR3-202ENST00000502422 MYT1LQ9UL68 1186 aa7.26□□□□□ -1.25
MATR3-202ENST00000502422 RTN4Q9NQC3 1192 aaKnown RBP7.25□□□□□ -1.25
MATR3-202ENST00000502422 MED1Q15648 1581 aaPredicted RBP7.25□□□□□ -1.25
MATR3-202ENST00000502422 LTBP4Q8N2S1 1624 aa7.25□□□□□ -1.25
MATR3-202ENST00000502422 ESF1Q9H501 851 aaKnown RBP7.24□□□□□ -1.25
MATR3-202ENST00000502422 NUP153P49790 1475 aaKnown RBP7.24□□□□□ -1.25
MATR3-202ENST00000502422 UHRF1BP1Q6BDS2 1440 aa7.24□□□□□ -1.25
MATR3-202ENST00000502422 ZMYM4Q5VZL5 1548 aa7.23□□□□□ -1.25
MATR3-202ENST00000502422 SCAPERQ9BY12 1400 aa7.23□□□□□ -1.25
MATR3-202ENST00000502422 HECW1Q76N89 1606 aa7.23□□□□□ -1.25
MATR3-202ENST00000502422 SAMD9Q5K651 1589 aa7.23□□□□□ -1.25
MATR3-202ENST00000502422 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.23□□□□□ -1.25
MATR3-202ENST00000502422 SETD1BQ9UPS6 1966 aaKnown RBP7.23□□□□□ -1.25
MATR3-202ENST00000502422 PROM2Q8N271 834 aa7.22□□□□□ -1.25
MATR3-202ENST00000502422 SIGLEC1Q9BZZ2 1709 aa7.22□□□□□ -1.25
MATR3-202ENST00000502422 PPARGC1BQ86YN6 1023 aaKnown RBP7.22□□□□□ -1.25
MATR3-202ENST00000502422 ATP10AO60312 1499 aa7.22□□□□□ -1.25
MATR3-202ENST00000502422 STRCQ7RTU9 1775 aa7.21□□□□□ -1.25
MATR3-202ENST00000502422 PIP4P2Q8N4L2 257 aa7.21□□□□□ -1.25
MATR3-202ENST00000502422 AKT1S1Q96B36 256 aa7.21□□□□□ -1.25
MATR3-202ENST00000502422 ATP1B4Q9UN42 357 aaPredicted RBP7.21□□□□□ -1.25
MATR3-202ENST00000502422 C9orf84Q5VXU9 1444 aa7.21□□□□□ -1.26
MATR3-202ENST00000502422 EFCAB2Q5VUJ9 269 aa7.21□□□□□ -1.26
MATR3-202ENST00000502422 ARHGEF12Q9NZN5 1544 aa7.2□□□□□ -1.26
MATR3-202ENST00000502422 ZBTB12Q9Y330 459 aaPredicted RBP7.2□□□□□ -1.26
MATR3-202ENST00000502422 AMER1Q5JTC6 1135 aaPredicted RBP7.2□□□□□ -1.26
MATR3-202ENST00000502422 PLCH2O75038 1416 aa7.19□□□□□ -1.26
MATR3-202ENST00000502422 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
MATR3-202ENST00000502422 MYT1Q01538 1121 aa7.18□□□□□ -1.26
MATR3-202ENST00000502422 UBAP1LF5GYI3 381 aa7.17□□□□□ -1.26
MATR3-202ENST00000502422 AFAP1Q8N556 730 aa7.17□□□□□ -1.26
MATR3-202ENST00000502422 ZNF518AQ6AHZ1 1483 aa7.17□□□□□ -1.26
MATR3-202ENST00000502422 MYO5CQ9NQX4 1742 aa7.16□□□□□ -1.26
MATR3-202ENST00000502422 TRAPPC8Q9Y2L5 1435 aa7.16□□□□□ -1.26
MATR3-202ENST00000502422 CDK13Q14004 1512 aaKnown RBP7.15□□□□□ -1.26
MATR3-202ENST00000502422 CPS1P31327 1500 aa7.15□□□□□ -1.26
MATR3-202ENST00000502422 REREQ9P2R6 1566 aa7.15□□□□□ -1.26
MATR3-202ENST00000502422 C3P01024 1663 aa7.15□□□□□ -1.26
MATR3-202ENST00000502422 ARHGAP5Q13017 1502 aa7.14□□□□□ -1.27
MATR3-202ENST00000502422 PLA2R1Q13018 1463 aa7.14□□□□□ -1.27
MATR3-202ENST00000502422 NCOA1Q15788 1441 aa7.13□□□□□ -1.27
MATR3-202ENST00000502422 FBXO3Q9UK99 471 aa7.13□□□□□ -1.27
MATR3-202ENST00000502422 ZNF335Q9H4Z2 1342 aaPredicted RBP7.12□□□□□ -1.27
MATR3-202ENST00000502422 NCKAP5LQ9HCH0 1330 aa7.12□□□□□ -1.27
MATR3-202ENST00000502422 PTPRKQ15262 1439 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms