RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
GAPVD1-209ENST00000436712 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
GAPVD1-209ENST00000436712 NEFMP07197 916 aa10.82□□□□□ -0.68
GAPVD1-209ENST00000436712 DISP1Q96F81 1524 aa10.81□□□□□ -0.68
GAPVD1-209ENST00000436712 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
GAPVD1-209ENST00000436712 KIAA0556O60303 1618 aa10.81□□□□□ -0.68
GAPVD1-209ENST00000436712 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
GAPVD1-209ENST00000436712 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-209ENST00000436712 KCNH8Q96L42 1107 aa10.8□□□□□ -0.68
GAPVD1-209ENST00000436712 LRRIQ1Q96JM4 1722 aa10.78□□□□□ -0.68
GAPVD1-209ENST00000436712 ANP32AP39687 249 aaKnown RBP10.78□□□□□ -0.68
GAPVD1-209ENST00000436712 FMN1Q68DA7 1419 aa10.78□□□□□ -0.68
GAPVD1-209ENST00000436712 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.69
GAPVD1-209ENST00000436712 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.69
GAPVD1-209ENST00000436712 TIAM1Q13009 1591 aa10.76□□□□□ -0.69
GAPVD1-209ENST00000436712 FYCO1Q9BQS8 1478 aa10.76□□□□□ -0.69
GAPVD1-209ENST00000436712 CASKIN1Q8WXD9 1431 aa10.76□□□□□ -0.69
GAPVD1-209ENST00000436712 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-209ENST00000436712 GSE1Q14687 1217 aa10.74□□□□□ -0.69
GAPVD1-209ENST00000436712 CARMIL2Q6F5E8 1435 aa10.74□□□□□ -0.69
GAPVD1-209ENST00000436712 CFAP43Q8NDM7 1665 aa10.74□□□□□ -0.69
GAPVD1-209ENST00000436712 PLB1Q6P1J6 1458 aa10.74□□□□□ -0.69
GAPVD1-209ENST00000436712 RSPH4AQ5TD94 716 aa10.73□□□□□ -0.69
GAPVD1-209ENST00000436712 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-209ENST00000436712 ZNF326Q5BKZ1 582 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-209ENST00000436712 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
GAPVD1-209ENST00000436712 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
GAPVD1-209ENST00000436712 CLASP1Q7Z460 1538 aa10.71□□□□□ -0.69
GAPVD1-209ENST00000436712 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-209ENST00000436712 HECW1Q76N89 1606 aa10.71□□□□□ -0.7
GAPVD1-209ENST00000436712 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.7
GAPVD1-209ENST00000436712 RAPGEF6Q8TEU7 1601 aa10.7□□□□□ -0.7
GAPVD1-209ENST00000436712 NAP1L2Q9ULW6 460 aaPredicted RBP10.7□□□□□ -0.7
GAPVD1-209ENST00000436712 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
GAPVD1-209ENST00000436712 SHROOM2Q13796 1616 aa10.69□□□□□ -0.7
GAPVD1-209ENST00000436712 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
GAPVD1-209ENST00000436712 EPRSP07814 1512 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-209ENST00000436712 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
GAPVD1-209ENST00000436712 NUP153P49790 1475 aaKnown RBP10.68□□□□□ -0.7
GAPVD1-209ENST00000436712 MAGI3Q5TCQ9 1506 aa10.68□□□□□ -0.7
GAPVD1-209ENST00000436712 PTPRGP23470 1445 aa10.68□□□□□ -0.7
GAPVD1-209ENST00000436712 CENPJQ9HC77 1338 aaPredicted RBP10.67□□□□□ -0.7
GAPVD1-209ENST00000436712 OSCARQ8IYS5 282 aa10.67□□□□□ -0.7
GAPVD1-209ENST00000436712 PHLDB1Q86UU1 1377 aa10.66□□□□□ -0.7
GAPVD1-209ENST00000436712 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
GAPVD1-209ENST00000436712 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-209ENST00000436712 NAP1L5Q96NT1 182 aaPredicted RBP10.65□□□□□ -0.7
GAPVD1-209ENST00000436712 MAP3K1Q13233 1512 aa10.65□□□□□ -0.71
GAPVD1-209ENST00000436712 TRIM52Q96A61 297 aa10.64□□□□□ -0.71
GAPVD1-209ENST00000436712 CCDC18Q5T9S5 1454 aa10.64□□□□□ -0.71
GAPVD1-209ENST00000436712 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
GAPVD1-209ENST00000436712 FAM50AQ14320 339 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-209ENST00000436712 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-209ENST00000436712 GTF2E1P29083 439 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-209ENST00000436712 IPO4Q8TEX9 1081 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-209ENST00000436712 ABCA8O94911 1581 aa10.63□□□□□ -0.71
GAPVD1-209ENST00000436712 CCER2I3L3R5 266 aa10.62□□□□□ -0.71
GAPVD1-209ENST00000436712 CCNB3Q8WWL7 1395 aa10.62□□□□□ -0.71
GAPVD1-209ENST00000436712 RGS3P49796 1198 aa10.62□□□□□ -0.71
GAPVD1-209ENST00000436712 FRAT1Q92837 279 aaPredicted RBP10.62□□□□□ -0.71
GAPVD1-209ENST00000436712 LAS1LQ9Y4W2 734 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-209ENST00000436712 EHBP1L1Q8N3D4 1523 aa10.61□□□□□ -0.71
GAPVD1-209ENST00000436712 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-209ENST00000436712 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-209ENST00000436712 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
GAPVD1-209ENST00000436712 SUPT6HQ7KZ85 1726 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-209ENST00000436712 RRAGDQ9NQL2 400 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-209ENST00000436712 UACAQ9BZF9 1416 aa10.59□□□□□ -0.71
GAPVD1-209ENST00000436712 PDCL3Q9H2J4 239 aa10.59□□□□□ -0.71
GAPVD1-209ENST00000436712 ATP10BO94823 1461 aa10.58□□□□□ -0.71
GAPVD1-209ENST00000436712 KIF14Q15058 1648 aa10.58□□□□□ -0.72
GAPVD1-209ENST00000436712 CANXP27824 592 aaKnown RBP10.58□□□□□ -0.72
GAPVD1-209ENST00000436712 DCAF11Q8TEB1 546 aa10.58□□□□□ -0.72
GAPVD1-209ENST00000436712 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
GAPVD1-209ENST00000436712 B4GALNT3Q6L9W6 998 aa10.56□□□□□ -0.72
GAPVD1-209ENST00000436712 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
GAPVD1-209ENST00000436712 ABCC2Q92887 1545 aa10.56□□□□□ -0.72
GAPVD1-209ENST00000436712 FGD6Q6ZV73 1430 aa10.55□□□□□ -0.72
GAPVD1-209ENST00000436712 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
GAPVD1-209ENST00000436712 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 CNGB1Q14028 1251 aaPredicted RBP10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 RAB3GAP2Q9H2M9 1393 aa10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 ADCY10Q96PN6 1610 aa10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 TROQ12816 1431 aaPredicted RBP10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 MYOM3Q5VTT5 1437 aa10.54□□□□□ -0.72
GAPVD1-209ENST00000436712 ZCCHC11Q5TAX3 1644 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-209ENST00000436712 ZNF777Q9ULD5 760 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-209ENST00000436712 CLCN1P35523 988 aa10.52□□□□□ -0.72
GAPVD1-209ENST00000436712 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
GAPVD1-209ENST00000436712 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-209ENST00000436712 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
GAPVD1-209ENST00000436712 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
GAPVD1-209ENST00000436712 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-209ENST00000436712 CYB5RLQ6IPT4 315 aa10.5□□□□□ -0.73
GAPVD1-209ENST00000436712 CHIC2Q9UKJ5 165 aa10.5□□□□□ -0.73
GAPVD1-209ENST00000436712 HOMEZQ8IX15 550 aa10.49□□□□□ -0.73
GAPVD1-209ENST00000436712 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
GAPVD1-209ENST00000436712 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
GAPVD1-209ENST00000436712 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms