RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 ARHGEF11O15085 1522 aa10.14□□□□□ -0.79
HDAC8-211ENST00000415409 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
HDAC8-211ENST00000415409 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
HDAC8-211ENST00000415409 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
HDAC8-211ENST00000415409 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
HDAC8-211ENST00000415409 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
HDAC8-211ENST00000415409 PHF12Q96QT6 1004 aa10.12□□□□□ -0.79
HDAC8-211ENST00000415409 CASKIN1Q8WXD9 1431 aa10.11□□□□□ -0.79
HDAC8-211ENST00000415409 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
HDAC8-211ENST00000415409 IQGAP2Q13576 1575 aa10.1□□□□□ -0.79
HDAC8-211ENST00000415409 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
HDAC8-211ENST00000415409 NUP160Q12769 1436 aa10.09□□□□□ -0.79
HDAC8-211ENST00000415409 MAP3K1Q13233 1512 aa10.09□□□□□ -0.79
HDAC8-211ENST00000415409 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
HDAC8-211ENST00000415409 UGGT2Q9NYU1 1516 aa10.08□□□□□ -0.8
HDAC8-211ENST00000415409 MIER1Q8N108 512 aa10.08□□□□□ -0.8
HDAC8-211ENST00000415409 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
HDAC8-211ENST00000415409 SAMD9Q5K651 1589 aa10.08□□□□□ -0.8
HDAC8-211ENST00000415409 JPH4Q96JJ6 628 aa10.07□□□□□ -0.8
HDAC8-211ENST00000415409 TSPYL2Q9H2G4 693 aaPredicted RBP10.06□□□□□ -0.8
HDAC8-211ENST00000415409 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
HDAC8-211ENST00000415409 PCF11O94913 1555 aaKnown RBP10.03□□□□□ -0.8
HDAC8-211ENST00000415409 HRCP23327 699 aa10.03□□□□□ -0.8
HDAC8-211ENST00000415409 TIAM1Q13009 1591 aa10.03□□□□□ -0.8
HDAC8-211ENST00000415409 FKBP8Q14318 412 aa10.03□□□□□ -0.8
HDAC8-211ENST00000415409 CEP170Q5SW79 1584 aa10.03□□□□□ -0.8
HDAC8-211ENST00000415409 PLCD3Q8N3E9 789 aa10.03□□□□□ -0.8
HDAC8-211ENST00000415409 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
HDAC8-211ENST00000415409 CLASP1Q7Z460 1538 aa10.02□□□□□ -0.8
HDAC8-211ENST00000415409 DISP1Q96F81 1524 aa10.02□□□□□ -0.81
HDAC8-211ENST00000415409 CYB5RLQ6IPT4 315 aa10.01□□□□□ -0.81
HDAC8-211ENST00000415409 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
HDAC8-211ENST00000415409 CCDC18Q5T9S5 1454 aa9.99□□□□□ -0.81
HDAC8-211ENST00000415409 KIAA0556O60303 1618 aa9.99□□□□□ -0.81
HDAC8-211ENST00000415409 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
HDAC8-211ENST00000415409 MS4A3Q96HJ5 214 aa9.98□□□□□ -0.81
HDAC8-211ENST00000415409 CDK11AQ9UQ88 783 aaPredicted RBP9.98□□□□□ -0.81
HDAC8-211ENST00000415409 CCNB3Q8WWL7 1395 aa9.98□□□□□ -0.81
HDAC8-211ENST00000415409 PRG4Q92954 1404 aaPredicted RBP9.98□□□□□ -0.81
HDAC8-211ENST00000415409 RRBP1Q9P2E9 1410 aaKnown RBP9.98□□□□□ -0.81
HDAC8-211ENST00000415409 HECW1Q76N89 1606 aa9.96□□□□□ -0.82
HDAC8-211ENST00000415409 PTPRGP23470 1445 aa9.95□□□□□ -0.82
HDAC8-211ENST00000415409 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
HDAC8-211ENST00000415409 PHLDB1Q86UU1 1377 aa9.94□□□□□ -0.82
HDAC8-211ENST00000415409 ARID3CA6NKF2 412 aa9.94□□□□□ -0.82
HDAC8-211ENST00000415409 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
HDAC8-211ENST00000415409 CCDC61Q9Y6R9 512 aa9.94□□□□□ -0.82
HDAC8-211ENST00000415409 CFAP43Q8NDM7 1665 aa9.93□□□□□ -0.82
HDAC8-211ENST00000415409 FAM50AQ14320 339 aaKnown RBP9.93□□□□□ -0.82
HDAC8-211ENST00000415409 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
HDAC8-211ENST00000415409 EHBP1L1Q8N3D4 1523 aa9.92□□□□□ -0.82
HDAC8-211ENST00000415409 NUP153P49790 1475 aaKnown RBP9.91□□□□□ -0.82
HDAC8-211ENST00000415409 RASEFQ8IZ41 740 aa9.91□□□□□ -0.82
HDAC8-211ENST00000415409 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
HDAC8-211ENST00000415409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC8-211ENST00000415409 NCOA2Q15596 1464 aa9.9□□□□□ -0.83
HDAC8-211ENST00000415409 CDK13Q14004 1512 aaKnown RBP9.89□□□□□ -0.83
HDAC8-211ENST00000415409 PLEKHD1A6NEE1 506 aa9.89□□□□□ -0.83
HDAC8-211ENST00000415409 ITGAEP38570 1179 aa9.89□□□□□ -0.83
HDAC8-211ENST00000415409 RAPGEF6Q8TEU7 1601 aa9.89□□□□□ -0.83
HDAC8-211ENST00000415409 KIF12Q96FN5 646 aa9.88□□□□□ -0.83
HDAC8-211ENST00000415409 SHROOM2Q13796 1616 aa9.88□□□□□ -0.83
HDAC8-211ENST00000415409 MYOM3Q5VTT5 1437 aa9.88□□□□□ -0.83
HDAC8-211ENST00000415409 FGD6Q6ZV73 1430 aa9.88□□□□□ -0.83
HDAC8-211ENST00000415409 ASTLQ6HA08 431 aaPredicted RBP9.87□□□□□ -0.83
HDAC8-211ENST00000415409 PELP1Q8IZL8 1130 aaKnown RBP9.87□□□□□ -0.83
HDAC8-211ENST00000415409 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
HDAC8-211ENST00000415409 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
HDAC8-211ENST00000415409 TROQ12816 1431 aaPredicted RBP9.86□□□□□ -0.83
HDAC8-211ENST00000415409 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
HDAC8-211ENST00000415409 ABCA8O94911 1581 aa9.85□□□□□ -0.83
HDAC8-211ENST00000415409 SLC39A7Q92504 469 aa9.85□□□□□ -0.83
HDAC8-211ENST00000415409 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
HDAC8-211ENST00000415409 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
HDAC8-211ENST00000415409 MAP3K13O43283 966 aa9.84□□□□□ -0.83
HDAC8-211ENST00000415409 ATP10BO94823 1461 aa9.84□□□□□ -0.83
HDAC8-211ENST00000415409 SUPT6HQ7KZ85 1726 aaKnown RBP9.83□□□□□ -0.84
HDAC8-211ENST00000415409 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
HDAC8-211ENST00000415409 C7P10643 843 aa9.82□□□□□ -0.84
HDAC8-211ENST00000415409 FAM212AQ96EL1 285 aa9.82□□□□□ -0.84
HDAC8-211ENST00000415409 KIF13AQ9H1H9 1805 aa9.82□□□□□ -0.84
HDAC8-211ENST00000415409 ATN1P54259 1190 aaPredicted RBP9.81□□□□□ -0.84
HDAC8-211ENST00000415409 SETD5Q9C0A6 1442 aa9.81□□□□□ -0.84
HDAC8-211ENST00000415409 POTEB2H3BUK9 544 aa9.8□□□□□ -0.84
HDAC8-211ENST00000415409 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
HDAC8-211ENST00000415409 UHRF1BP1LA0JNW5 1464 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 TCOF1Q13428 1488 aaKnown RBP9.79□□□□□ -0.84
HDAC8-211ENST00000415409 ABCC2Q92887 1545 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 NUBP1P53384 320 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 ERCC6L2Q5T890 1561 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 LRRIQ1Q96JM4 1722 aa9.79□□□□□ -0.84
HDAC8-211ENST00000415409 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
HDAC8-211ENST00000415409 TRPC6Q9Y210 931 aa9.78□□□□□ -0.84
HDAC8-211ENST00000415409 CLSPNQ9HAW4 1339 aa9.78□□□□□ -0.84
HDAC8-211ENST00000415409 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.84
HDAC8-211ENST00000415409 TIE1P35590 1138 aa9.77□□□□□ -0.85
HDAC8-211ENST00000415409 ZNF777Q9ULD5 760 aaPredicted RBP9.76□□□□□ -0.85
HDAC8-211ENST00000415409 GPATCH8Q9UKJ3 1502 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms