RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
HDAC8-211ENST00000415409 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
HDAC8-211ENST00000415409 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
HDAC8-211ENST00000415409 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
HDAC8-211ENST00000415409 FOXD1Q16676 465 aa16.07■□□□□ 0.16
HDAC8-211ENST00000415409 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
HDAC8-211ENST00000415409 MSH5O43196 834 aa15.09■□□□□ 0.01
HDAC8-211ENST00000415409 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
HDAC8-211ENST00000415409 ADRA2BP18089 450 aa15□□□□□ -0.01
HDAC8-211ENST00000415409 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
HDAC8-211ENST00000415409 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
HDAC8-211ENST00000415409 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
HDAC8-211ENST00000415409 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
HDAC8-211ENST00000415409 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
HDAC8-211ENST00000415409 DMRT2Q9Y5R5 561 aa13.67□□□□□ -0.22
HDAC8-211ENST00000415409 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
HDAC8-211ENST00000415409 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
HDAC8-211ENST00000415409 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
HDAC8-211ENST00000415409 HOXD11P31277 338 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-211ENST00000415409 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-211ENST00000415409 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
HDAC8-211ENST00000415409 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-211ENST00000415409 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
HDAC8-211ENST00000415409 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
HDAC8-211ENST00000415409 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
HDAC8-211ENST00000415409 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
HDAC8-211ENST00000415409 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
HDAC8-211ENST00000415409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC8-211ENST00000415409 KCNA4P22459 653 aa12.52□□□□□ -0.41
HDAC8-211ENST00000415409 ABCC9O60706 1549 aa12.45□□□□□ -0.42
HDAC8-211ENST00000415409 ZCCHC6Q5VYS8 1495 aaKnown RBP12.4□□□□□ -0.43
HDAC8-211ENST00000415409 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
HDAC8-211ENST00000415409 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-211ENST00000415409 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.45
HDAC8-211ENST00000415409 CAPN15O75808 1086 aa12.19□□□□□ -0.46
HDAC8-211ENST00000415409 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
HDAC8-211ENST00000415409 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
HDAC8-211ENST00000415409 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
HDAC8-211ENST00000415409 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
HDAC8-211ENST00000415409 APLP2Q06481 763 aa12.05□□□□□ -0.48
HDAC8-211ENST00000415409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-211ENST00000415409 DSG3P32926 999 aa12.02□□□□□ -0.49
HDAC8-211ENST00000415409 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
HDAC8-211ENST00000415409 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
HDAC8-211ENST00000415409 NACADO15069 1562 aa11.97□□□□□ -0.49
HDAC8-211ENST00000415409 RB1CC1Q8TDY2 1594 aa11.96□□□□□ -0.49
HDAC8-211ENST00000415409 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
HDAC8-211ENST00000415409 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-211ENST00000415409 ABCB7O75027 752 aa11.89□□□□□ -0.51
HDAC8-211ENST00000415409 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
HDAC8-211ENST00000415409 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-211ENST00000415409 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
HDAC8-211ENST00000415409 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.52
HDAC8-211ENST00000415409 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
HDAC8-211ENST00000415409 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
HDAC8-211ENST00000415409 POLA2Q14181 598 aa11.63□□□□□ -0.55
HDAC8-211ENST00000415409 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.55
HDAC8-211ENST00000415409 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
HDAC8-211ENST00000415409 POTEHQ6S545 545 aa11.53□□□□□ -0.56
HDAC8-211ENST00000415409 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC8-211ENST00000415409 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
HDAC8-211ENST00000415409 RSF1Q96T23 1441 aaPredicted RBP11.5□□□□□ -0.57
HDAC8-211ENST00000415409 ZBTB22O15209 634 aa11.47□□□□□ -0.57
HDAC8-211ENST00000415409 CECR2Q9BXF3 1484 aa11.46□□□□□ -0.57
HDAC8-211ENST00000415409 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
HDAC8-211ENST00000415409 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
HDAC8-211ENST00000415409 MROH2BQ7Z745 1585 aa11.39□□□□□ -0.59
HDAC8-211ENST00000415409 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.6
HDAC8-211ENST00000415409 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
HDAC8-211ENST00000415409 EIF4G1Q04637 1599 aaKnown RBP11.29□□□□□ -0.6
HDAC8-211ENST00000415409 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
HDAC8-211ENST00000415409 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
HDAC8-211ENST00000415409 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
HDAC8-211ENST00000415409 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
HDAC8-211ENST00000415409 WIZO95785 1651 aa11.23□□□□□ -0.61
HDAC8-211ENST00000415409 TOP2AP11388 1531 aaKnown RBP11.19□□□□□ -0.62
HDAC8-211ENST00000415409 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
HDAC8-211ENST00000415409 PEG3Q9GZU2 1588 aa11.17□□□□□ -0.62
HDAC8-211ENST00000415409 FBLN2P98095 1184 aa11.17□□□□□ -0.62
HDAC8-211ENST00000415409 SMARCA2P51531 1590 aa11.16□□□□□ -0.62
HDAC8-211ENST00000415409 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
HDAC8-211ENST00000415409 REM2Q8IYK8 340 aaPredicted RBP11.12□□□□□ -0.63
HDAC8-211ENST00000415409 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
HDAC8-211ENST00000415409 NCAPD3P42695 1498 aa11.1□□□□□ -0.63
HDAC8-211ENST00000415409 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
HDAC8-211ENST00000415409 SPDYE2BA6NHP3 402 aa11.03□□□□□ -0.64
HDAC8-211ENST00000415409 SPDYE6P0CI01 402 aa11.03□□□□□ -0.64
HDAC8-211ENST00000415409 SPDYE2Q495Y8 402 aa11.03□□□□□ -0.64
HDAC8-211ENST00000415409 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
HDAC8-211ENST00000415409 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
HDAC8-211ENST00000415409 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
HDAC8-211ENST00000415409 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
HDAC8-211ENST00000415409 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
HDAC8-211ENST00000415409 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
HDAC8-211ENST00000415409 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
HDAC8-211ENST00000415409 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
HDAC8-211ENST00000415409 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC8-211ENST00000415409 CUX2O14529 1486 aa10.87□□□□□ -0.67
HDAC8-211ENST00000415409 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
HDAC8-211ENST00000415409 DNAJC5Q9H3Z4 198 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms