RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Armcx1Q9CX83 456 aa19.78■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Hsp90b1P08113 802 aaKnown RBP19.76■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Speer4f1Q9D5Q6 258 aa19.76■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 PnnO35691 725 aaKnown RBP19.76■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Slc4a3P16283 1227 aa19.75■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Ipo9Q91YE6 1041 aa19.75■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Gtf2e1Q9D0D5 440 aa19.75■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Znf326O88291 580 aa19.74■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Bcl11aQ9QYE3 773 aa19.74■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Crybg2B7ZCC2 1516 aa19.73■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Pes1Q9EQ61 584 aaKnown RBP19.73■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Sin3aQ60520 1274 aaKnown RBP19.72■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Cnga1P29974 684 aa19.71■□□□□ 0.75
Pcdha9-201ENSMUST00000115659 Trak1Q6PD31 939 aa19.7■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Cabp1Q9JLK7 227 aa19.7■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Ifit1bl1D3Z6F0 470 aa19.7■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 1700019A02RikA0A087WPV9 146 aa19.7■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Pde3bQ61409 1100 aa19.69■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Sart3Q9JLI8 962 aaKnown RBP19.67■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Dhx57Q6P5D3 1388 aaKnown RBP19.67■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Spryd3E9Q9B3 442 aa19.66■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Rock2P70336 1388 aa19.66■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Golga2Q921M4 999 aa19.65■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Ipo8Q7TMY7 1010 aa19.65■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 Dnttip2Q8R2M2 758 aaKnown RBP19.65■□□□□ 0.74
Pcdha9-201ENSMUST00000115659 NgefQ8CHT1 710 aa19.64■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 Gm973E9Q295 1059 aa19.63■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 Rtf1A2AQ19 715 aaKnown RBP19.62■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 Rpap1Q80TE0 1409 aa19.62■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 CftrP26361 1476 aa19.61■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 Stard8Q8K031 1019 aa19.61■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 U2af1Q9D883 239 aaKnown RBP19.61■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 Carmil1Q6EDY6 1374 aa19.6■□□□□ 0.73
Pcdha9-201ENSMUST00000115659 Nup155Q99P88 1391 aaKnown RBP19.58■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 UacaQ8CGB3 1411 aa19.57■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Erich6bQ9D4S6 220 aa19.57■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Srcin1Q9QWI6 1250 aa19.57■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Plekhh2Q8C115 1491 aa19.57■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Sycp2Q9CUU3 1500 aa19.56■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Dcaf11Q91VU6 549 aa19.56■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Lemd3Q9WU40 921 aa19.55■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Sh3bp5Q9Z131 463 aa19.54■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 U2surpQ6NV83 1029 aaKnown RBP19.53■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 Smg6P61406 1418 aaKnown RBP19.52■□□□□ 0.72
Pcdha9-201ENSMUST00000115659 4933402E13RikQ9D4D2 429 aa19.51■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Tmco5bQ80X59 307 aa19.51■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Ccar1Q8CH18 1146 aaKnown RBP19.51■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Rtn4Q99P72 1162 aaKnown RBP19.51■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Eif4g2Q62448 906 aaKnown RBP19.5■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Rapgef2Q8CHG7 1496 aa19.5■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Calcoco2A2A6M5 331 aa19.48■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 AknaQ80VW7 1404 aa19.47■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Smarce1O54941 411 aaKnown RBP19.47■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 MsnP26041 577 aaKnown RBP19.47■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Stk26Q99JT2 416 aa19.47■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Mfap1aC0HKD8 439 aaKnown RBP19.46■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Mfap1bC0HKD9 439 aaKnown RBP19.46■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Cux2P70298 1426 aa19.46■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Tnnt2P50752 301 aa19.46■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Cluap1Q8R3P7 413 aa19.46■□□□□ 0.71
Pcdha9-201ENSMUST00000115659 Rsph4aQ8BYM7 716 aa19.45■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Ccnb3Q810T2 1396 aa19.45■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 CrbnQ8C7D2 445 aa19.44■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Spag9Q58A65 1321 aaKnown RBP19.44■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Q3TQI7 289 aaKnown RBP19.44■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Rrp12Q6P5B0 1295 aaKnown RBP19.44■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Rassf8Q8CJ96 419 aa19.44■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Pcmtd1P59913 357 aa19.44■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Smarca2Q6DIC0 1577 aa19.43■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Atp6v1dP57746 247 aa19.43■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Ksr2Q3UVC0 959 aa19.43■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 R3hcc1Q8BSI6 488 aa19.43■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Slc4a1apE9PX68 744 aa19.42■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Cgnl1Q6AW69 1298 aa19.42■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 AampJ3QN89 436 aa19.41■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Usp47Q8BY87 1376 aa19.41■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Iffo2Q8R2V2 512 aa19.41■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 Birc3O08863 600 aa19.4■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 MyclP10166 368 aa19.4■□□□□ 0.7
Pcdha9-201ENSMUST00000115659 CenpjQ569L8 1344 aa19.39■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Ddrgk1Q80WW9 315 aa19.38■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Anapc15P60007 132 aa19.38■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Nolc1E9Q5C9 702 aaKnown RBP19.38■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 MecomP14404 1042 aa19.37■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Arid3cA6PWV5 409 aa19.37■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Kif3bQ61771 747 aa19.37■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 RdxP26043 583 aaKnown RBP19.36■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Znf330Q922H9 316 aa19.36■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Phldb1Q6PDH0 1371 aaKnown RBP19.35■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Cecr2E9Q2Z1 1453 aa19.35■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Rock1P70335 1354 aa19.34■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Ylpm1Q9R0I7 1386 aaKnown RBP19.34■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Clstn1Q9EPL2 979 aa19.34■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Pank3Q8R2W9 370 aa19.34■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Synj1Q8CHC4 1574 aa19.34■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Ppp1r18Q8BQ30 594 aa19.34■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Plin1Q8CGN5 517 aa19.33■□□□□ 0.69
Pcdha9-201ENSMUST00000115659 Nol10Q5RJG1 687 aaKnown RBP19.33■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 CgnP59242 1191 aa19.33■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Psme1P97371 249 aa19.32■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 77 ms