Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Gm25239-201ENSMUST00000174915 86 ntBASIC44.64■■■■■ 4.74
Cgnl1Q6AW69 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42.54■■■■■ 4.4
Cgnl1Q6AW69 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
Cgnl1Q6AW69 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.15■■■■■ 4.18
Cgnl1Q6AW69 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.86■■■■■ 4.13
Cgnl1Q6AW69 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Cgnl1Q6AW69 Gm15042-201ENSMUST00000120212 883 ntBASIC39.84■■■■□ 3.97
Cgnl1Q6AW69 Psd-208ENSMUST00000224556 2034 ntBASIC39.6■■■■□ 3.93
Cgnl1Q6AW69 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Cgnl1Q6AW69 Gm15045-201ENSMUST00000117359 883 ntBASIC39.08■■■■□ 3.85
Cgnl1Q6AW69 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.87■■■■□ 3.81
Cgnl1Q6AW69 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Cgnl1Q6AW69 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.63■■■■□ 3.77
Cgnl1Q6AW69 Gm24109-201ENSMUST00000175489 103 ntBASIC38.31■■■■□ 3.72
Cgnl1Q6AW69 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Cgnl1Q6AW69 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Cgnl1Q6AW69 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Cgnl1Q6AW69 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.94■■■■□ 3.66
Cgnl1Q6AW69 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Cgnl1Q6AW69 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Cgnl1Q6AW69 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.77■■■■□ 3.64
Cgnl1Q6AW69 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Cgnl1Q6AW69 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.71■■■■□ 3.63
Cgnl1Q6AW69 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.62■■■■□ 3.61
Cgnl1Q6AW69 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.6■■■■□ 3.61
Cgnl1Q6AW69 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.59■■■■□ 3.61
Cgnl1Q6AW69 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Cgnl1Q6AW69 Gm23366-201ENSMUST00000175022 89 ntBASIC37.42■■■■□ 3.58
Cgnl1Q6AW69 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Cgnl1Q6AW69 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Cgnl1Q6AW69 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37.32■■■■□ 3.57
Cgnl1Q6AW69 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.25■■■■□ 3.55
Cgnl1Q6AW69 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
Cgnl1Q6AW69 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Cgnl1Q6AW69 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Cgnl1Q6AW69 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Cgnl1Q6AW69 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
Cgnl1Q6AW69 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Cgnl1Q6AW69 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Cgnl1Q6AW69 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.63■■■■□ 3.45
Cgnl1Q6AW69 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
Cgnl1Q6AW69 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.55■■■■□ 3.44
Cgnl1Q6AW69 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Cgnl1Q6AW69 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.43■■■■□ 3.42
Cgnl1Q6AW69 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.36■■■■□ 3.41
Cgnl1Q6AW69 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Cgnl1Q6AW69 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
Cgnl1Q6AW69 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Cgnl1Q6AW69 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Cgnl1Q6AW69 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.08■■■■□ 3.37
Cgnl1Q6AW69 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Cgnl1Q6AW69 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Cgnl1Q6AW69 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
Cgnl1Q6AW69 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Cgnl1Q6AW69 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.51■■■■□ 3.27
Cgnl1Q6AW69 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
Cgnl1Q6AW69 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.41■■■■□ 3.26
Cgnl1Q6AW69 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.33■■■■□ 3.25
Cgnl1Q6AW69 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.33■■■■□ 3.25
Cgnl1Q6AW69 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.32■■■■□ 3.24
Cgnl1Q6AW69 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.31■■■■□ 3.24
Cgnl1Q6AW69 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.31■■■■□ 3.24
Cgnl1Q6AW69 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Cgnl1Q6AW69 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.24■■■■□ 3.23
Cgnl1Q6AW69 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Cgnl1Q6AW69 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.09■■■■□ 3.21
Cgnl1Q6AW69 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Cgnl1Q6AW69 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Cgnl1Q6AW69 Gm27325-201ENSMUST00000175467 74 ntBASIC35.07■■■■□ 3.2
Cgnl1Q6AW69 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Cgnl1Q6AW69 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.19
Cgnl1Q6AW69 Gm25238-201ENSMUST00000174914 89 ntBASIC34.95■■■■□ 3.19
Cgnl1Q6AW69 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.88■■■■□ 3.17
Cgnl1Q6AW69 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.88■■■■□ 3.17
Cgnl1Q6AW69 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Cgnl1Q6AW69 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Cgnl1Q6AW69 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Cgnl1Q6AW69 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Cgnl1Q6AW69 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
Cgnl1Q6AW69 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Cgnl1Q6AW69 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Cgnl1Q6AW69 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Cgnl1Q6AW69 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.7■■■■□ 3.15
Cgnl1Q6AW69 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Cgnl1Q6AW69 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Cgnl1Q6AW69 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Cgnl1Q6AW69 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Cgnl1Q6AW69 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Cgnl1Q6AW69 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
Cgnl1Q6AW69 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Cgnl1Q6AW69 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cgnl1Q6AW69 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Cgnl1Q6AW69 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.4■■■■□ 3.1
Cgnl1Q6AW69 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Cgnl1Q6AW69 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Cgnl1Q6AW69 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.37■■■■□ 3.09
Cgnl1Q6AW69 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
Cgnl1Q6AW69 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Cgnl1Q6AW69 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Cgnl1Q6AW69 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34.25■■■■□ 3.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms