RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Dhx57Q6P5D3 1388 aaKnown RBP18.53■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Tmf1B9EKI3 1091 aa18.52■□□□□ 0.56
Pcdha11-202ENSMUST00000115657 Chmp5Q9D7S9 219 aa18.52■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Adam1bQ8R534 806 aa18.51■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Smg6P61406 1418 aaKnown RBP18.51■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 PnnO35691 725 aaKnown RBP18.51■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Cttnbp2B9EJA2 1648 aa18.49■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Cecr2E9Q2Z1 1453 aa18.48■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 HnrnpuQ8VEK3 800 aaKnown RBP18.47■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Irx6Q9ER75 438 aa18.47■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Casc1Q6TDU8 730 aa18.47■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 B4galnt3Q6L8S8 986 aa18.46■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Rpap1Q80TE0 1409 aa18.46■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Dbr1Q923B1 550 aa18.46■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Ankrd36D3Z4K0 1415 aa18.46■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Sin3aQ60520 1274 aaKnown RBP18.46■□□□□ 0.55
Pcdha11-202ENSMUST00000115657 Plekhh2Q8C115 1491 aa18.45■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 4933402E13RikQ9D4D2 429 aa18.45■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Stag3O70576 1240 aa18.44■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Cabp1Q9JLK7 227 aa18.42■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Smarca4Q3TKT4 1613 aaKnown RBP18.42■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Ipo8Q7TMY7 1010 aa18.41■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Pes1Q9EQ61 584 aaKnown RBP18.41■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Slc4a3P16283 1227 aa18.4■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Speer4f1Q9D5Q6 258 aa18.4■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 Stard8Q8K031 1019 aa18.4■□□□□ 0.54
Pcdha11-202ENSMUST00000115657 MccE9PWI3 1003 aa18.39■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Atad2bE9Q166 1460 aaKnown RBP18.38■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Trak1Q6PD31 939 aa18.38■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Gtf2e1Q9D0D5 440 aa18.38■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 AampJ3QN89 436 aa18.37■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Gm6268A2A3U9 297 aa18.36■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Nup155Q99P88 1391 aaKnown RBP18.35■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Stk24Q99KH8 431 aa18.35■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 ScribQ80U72 1612 aa18.34■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Dnttip2Q8R2M2 758 aaKnown RBP18.34■□□□□ 0.53
Pcdha11-202ENSMUST00000115657 Ccnb3Q810T2 1396 aa18.33■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Ifit1bl1D3Z6F0 470 aa18.32■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Golga2Q921M4 999 aa18.32■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Hsp90b1P08113 802 aaKnown RBP18.32■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Cux2P70298 1426 aa18.32■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Cux1P53564 1515 aa18.31■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Nolc1E9Q5C9 702 aaKnown RBP18.3■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Pde3bQ61409 1100 aa18.3■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Gm973E9Q295 1059 aa18.29■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Usp47Q8BY87 1376 aa18.29■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Armcx1Q9CX83 456 aa18.27■□□□□ 0.52
Pcdha11-202ENSMUST00000115657 Phldb1Q6PDH0 1371 aaKnown RBP18.27■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Srcin1Q9QWI6 1250 aa18.25■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Rrp12Q6P5B0 1295 aaKnown RBP18.24■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Vps8Q0P5W1 1427 aa18.24■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Sart3Q9JLI8 962 aaKnown RBP18.23■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Rtn4Q99P72 1162 aaKnown RBP18.23■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Mre11Q61216 706 aa18.22■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Ccar1Q8CH18 1146 aaKnown RBP18.22■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 1700019A02RikA0A087WPV9 146 aa18.22■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Calcoco2A2A6M5 331 aa18.22■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Top2aQ01320 1528 aaKnown RBP18.21■□□□□ 0.51
Pcdha11-202ENSMUST00000115657 Eif4g2Q62448 906 aaKnown RBP18.2■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Spryd3E9Q9B3 442 aa18.2■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 LrpprcQ6PB66 1392 aaKnown RBP18.2■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Ddrgk1Q80WW9 315 aa18.19■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Sh3bp5Q9Z131 463 aa18.19■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Dcaf11Q91VU6 549 aa18.18■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 U2af1Q9D883 239 aaKnown RBP18.18■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Cnga1P29974 684 aa18.18■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Rock1P70335 1354 aa18.18■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 NgefQ8CHT1 710 aa18.17■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Erich6bQ9D4S6 220 aa18.17■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Cgnl1Q6AW69 1298 aa18.16■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Tnnt2P50752 301 aa18.16■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Polr1aO35134 1717 aaKnown RBP18.16■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Smarce1O54941 411 aaKnown RBP18.15■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Ylpm1Q9R0I7 1386 aaKnown RBP18.15■□□□□ 0.5
Pcdha11-202ENSMUST00000115657 Shroom4Q1W617 1475 aa18.14■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Clstn1Q9EPL2 979 aa18.14■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Gtf3c3Q3TMP1 882 aa18.13■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Lemd3Q9WU40 921 aa18.13■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Atp6v1dP57746 247 aa18.13■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Rtf1A2AQ19 715 aaKnown RBP18.13■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 CrbnQ8C7D2 445 aa18.13■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 MsnP26041 577 aaKnown RBP18.12■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Rsph4aQ8BYM7 716 aa18.12■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Dapk1Q80YE7 1442 aa18.12■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Ncapd3Q6ZQK0 1506 aa18.12■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Ralbp1Q62172 648 aa18.11■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Mfap1aC0HKD8 439 aaKnown RBP18.11■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Mfap1bC0HKD9 439 aaKnown RBP18.11■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Anapc15P60007 132 aa18.11■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Znf710Q3U288 666 aa18.11■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Slc4a1apE9PX68 744 aa18.1■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Map3k1P53349 1493 aa18.1■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Rsph3aQ3UFY4 516 aa18.09■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Pank3Q8R2W9 370 aa18.09■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 CenpjQ569L8 1344 aa18.08■□□□□ 0.49
Pcdha11-202ENSMUST00000115657 Efcab5A0JP43 1406 aa18.08■□□□□ 0.48
Pcdha11-202ENSMUST00000115657 Rassf8Q8CJ96 419 aa18.08■□□□□ 0.48
Pcdha11-202ENSMUST00000115657 Iqgap2Q3UQ44 1575 aa18.08■□□□□ 0.48
Pcdha11-202ENSMUST00000115657 Prkrip1Q9CWV6 186 aaKnown RBP18.08■□□□□ 0.48
Pcdha11-202ENSMUST00000115657 Ncoa2Q61026 1462 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms