RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Rhox8Q6VSS7 320 aa25.2■■□□□ 1.63
Pcdha11-202ENSMUST00000115657 Rpgrip1Q9EPQ2 1331 aa24.18■■□□□ 1.46
Pcdha11-202ENSMUST00000115657 NischQ80TM9 1593 aa22.92■■□□□ 1.26
Pcdha11-202ENSMUST00000115657 Las1lA2BE28 776 aaKnown RBP22.82■■□□□ 1.24
Pcdha11-202ENSMUST00000115657 Cngb1E1AZ71 1325 aa22.81■■□□□ 1.24
Pcdha11-202ENSMUST00000115657 Ehmt2Q9Z148 1263 aaKnown RBP22.56■■□□□ 1.2
Pcdha11-202ENSMUST00000115657 Ccdc136Q3TVA9 1136 aa22.39■■□□□ 1.18
Pcdha11-202ENSMUST00000115657 Pelp1Q9DBD5 1123 aaKnown RBP22.37■■□□□ 1.17
Pcdha11-202ENSMUST00000115657 Trim41Q5NCC3 630 aa22.36■■□□□ 1.17
Pcdha11-202ENSMUST00000115657 Ccdc180J3QNE4 1664 aa22.25■■□□□ 1.15
Pcdha11-202ENSMUST00000115657 Acin1Q9JIX8 1338 aaKnown RBP22.25■■□□□ 1.15
Pcdha11-202ENSMUST00000115657 Wdr66E9Q743 1299 aa22.22■■□□□ 1.15
Pcdha11-202ENSMUST00000115657 Rtl1Q7M732 1744 aa22.2■■□□□ 1.14
Pcdha11-202ENSMUST00000115657 Esf1Q3V1V3 845 aaKnown RBP22.11■■□□□ 1.13
Pcdha11-202ENSMUST00000115657 Ube2uB1AUC4 352 aa22.02■■□□□ 1.12
Pcdha11-202ENSMUST00000115657 Zeb1Q64318 1117 aa21.96■■□□□ 1.11
Pcdha11-202ENSMUST00000115657 NefmP08553 848 aa21.94■■□□□ 1.1
Pcdha11-202ENSMUST00000115657 HrcG5E8J6 738 aa21.93■■□□□ 1.1
Pcdha11-202ENSMUST00000115657 Gab3Q8BSM5 595 aa21.86■■□□□ 1.09
Pcdha11-202ENSMUST00000115657 Npm2Q80W85 207 aa21.7■■□□□ 1.06
Pcdha11-202ENSMUST00000115657 CenpbP27790 599 aa21.65■■□□□ 1.06
Pcdha11-202ENSMUST00000115657 Abcc9P70170 1546 aa21.56■■□□□ 1.04
Pcdha11-202ENSMUST00000115657 Stra8P70278 393 aa21.51■■□□□ 1.03
Pcdha11-202ENSMUST00000115657 Myt1lP97500 1187 aa21.45■■□□□ 1.02
Pcdha11-202ENSMUST00000115657 Amer1Q7TS75 1132 aa21.35■■□□□ 1.01
Pcdha11-202ENSMUST00000115657 Myt1Q8CFC2 1127 aa21.35■■□□□ 1.01
Pcdha11-202ENSMUST00000115657 Pcgf6Q99NA9 353 aa21.33■■□□□ 1.01
Pcdha11-202ENSMUST00000115657 UbtfP25976 765 aaKnown RBP21.27■□□□□ 0.99
Pcdha11-202ENSMUST00000115657 Cdk11bP24788 784 aaKnown RBP21.19■□□□□ 0.98
Pcdha11-202ENSMUST00000115657 Tnnt3Q9QZ47 272 aa21.08■□□□□ 0.97
Pcdha11-202ENSMUST00000115657 Zcchc6Q5BLK4 1491 aaKnown RBP20.98■□□□□ 0.95
Pcdha11-202ENSMUST00000115657 Abcc8B2RUS7 1588 aa20.96■□□□□ 0.95
Pcdha11-202ENSMUST00000115657 Slc24a1Q91WD8 1130 aa20.93■□□□□ 0.94
Pcdha11-202ENSMUST00000115657 Nop58Q6DFW4 536 aaKnown RBP20.92■□□□□ 0.94
Pcdha11-202ENSMUST00000115657 4930567H17RikQ3V0K5 233 aa20.86■□□□□ 0.93
Pcdha11-202ENSMUST00000115657 Supt5hO55201 1082 aaKnown RBP20.8■□□□□ 0.92
Pcdha11-202ENSMUST00000115657 Anp32bQ9EST5 272 aaKnown RBP20.76■□□□□ 0.91
Pcdha11-202ENSMUST00000115657 Dcaf1Q80TR8 1506 aa20.73■□□□□ 0.91
Pcdha11-202ENSMUST00000115657 TonslQ6NZL6 1363 aa20.73■□□□□ 0.91
Pcdha11-202ENSMUST00000115657 NrdcQ8BHG1 1161 aa20.68■□□□□ 0.9
Pcdha11-202ENSMUST00000115657 Rtl5Q5DTT4 599 aa20.68■□□□□ 0.9
Pcdha11-202ENSMUST00000115657 Mier1Q5UAK0 511 aa20.63■□□□□ 0.89
Pcdha11-202ENSMUST00000115657 NclP09405 707 aaKnown RBP20.6■□□□□ 0.89
Pcdha11-202ENSMUST00000115657 NeflP08551 543 aa20.58■□□□□ 0.89
Pcdha11-202ENSMUST00000115657 4933416C03RikQ3V063 378 aa20.58■□□□□ 0.88
Pcdha11-202ENSMUST00000115657 Il27Q8K3I6 234 aa20.54■□□□□ 0.88
Pcdha11-202ENSMUST00000115657 ClspnQ80YR7 1315 aa20.54■□□□□ 0.88
Pcdha11-202ENSMUST00000115657 Fam50aQ9WV03 339 aaKnown RBP20.52■□□□□ 0.87
Pcdha11-202ENSMUST00000115657 Cep164Q5DU05 1446 aa20.49■□□□□ 0.87
Pcdha11-202ENSMUST00000115657 Ttbk1Q6PCN3 1308 aa20.47■□□□□ 0.87
Pcdha11-202ENSMUST00000115657 Gm35339A0A140LHH9 1649 aa20.39■□□□□ 0.86
Pcdha11-202ENSMUST00000115657 Neurod1Q60867 357 aa20.39■□□□□ 0.85
Pcdha11-202ENSMUST00000115657 Brd4Q9ESU6 1400 aaKnown RBP20.38■□□□□ 0.85
Pcdha11-202ENSMUST00000115657 Ap3b1Q9Z1T1 1105 aa20.36■□□□□ 0.85
Pcdha11-202ENSMUST00000115657 Os9Q8K2C7 672 aa20.33■□□□□ 0.84
Pcdha11-202ENSMUST00000115657 Eif5bQ05D44 1216 aaKnown RBP20.3■□□□□ 0.84
Pcdha11-202ENSMUST00000115657 Anks4bQ8K3X6 423 aa20.26■□□□□ 0.83
Pcdha11-202ENSMUST00000115657 Anp32aO35381 247 aa20.24■□□□□ 0.83
Pcdha11-202ENSMUST00000115657 Rb1cc1Q9ESK9 1588 aa20.18■□□□□ 0.82
Pcdha11-202ENSMUST00000115657 Ppargc1bQ8VHJ7 1014 aa20.16■□□□□ 0.82
Pcdha11-202ENSMUST00000115657 Aplp2Q06335 707 aa20.11■□□□□ 0.81
Pcdha11-202ENSMUST00000115657 Ccer2J3QPU5 274 aa20.09■□□□□ 0.81
Pcdha11-202ENSMUST00000115657 Sall2Q9QX96 1004 aa20.06■□□□□ 0.8
Pcdha11-202ENSMUST00000115657 Plekhg3Q4VAC9 1341 aa20.06■□□□□ 0.8
Pcdha11-202ENSMUST00000115657 Clip1Q922J3 1391 aa20.03■□□□□ 0.8
Pcdha11-202ENSMUST00000115657 DiexfQ8BTT6 772 aaKnown RBP20.02■□□□□ 0.8
Pcdha11-202ENSMUST00000115657 Npm1Q61937 292 aaKnown RBP19.98■□□□□ 0.79
Pcdha11-202ENSMUST00000115657 Chic1Q8CBW7 227 aa19.94■□□□□ 0.78
Pcdha11-202ENSMUST00000115657 Csrnp3P59055 597 aa19.88■□□□□ 0.77
Pcdha11-202ENSMUST00000115657 Hdac5Q9Z2V6 1113 aa19.87■□□□□ 0.77
Pcdha11-202ENSMUST00000115657 Lmod2Q3UHZ5 550 aa19.87■□□□□ 0.77
Pcdha11-202ENSMUST00000115657 Baz1aO88379 1555 aa19.84■□□□□ 0.77
Pcdha11-202ENSMUST00000115657 NacadQ5SWP3 1504 aa19.79■□□□□ 0.76
Pcdha11-202ENSMUST00000115657 DaxxO35613 739 aa19.73■□□□□ 0.75
Pcdha11-202ENSMUST00000115657 Upf2A2AT37 1269 aaKnown RBP19.71■□□□□ 0.75
Pcdha11-202ENSMUST00000115657 Golga3P55937 1487 aa19.7■□□□□ 0.74
Pcdha11-202ENSMUST00000115657 Eid3Q3V124 375 aa19.69■□□□□ 0.74
Pcdha11-202ENSMUST00000115657 Hnrnpul2Q00PI9 745 aaKnown RBP19.69■□□□□ 0.74
Pcdha11-202ENSMUST00000115657 Calr4Q3TQS0 420 aa19.68■□□□□ 0.74
Pcdha11-202ENSMUST00000115657 Zbtb7cQ8VCZ7 619 aa19.65■□□□□ 0.74
Pcdha11-202ENSMUST00000115657 Gm13697A2AK42 830 aa19.64■□□□□ 0.73
Pcdha11-202ENSMUST00000115657 Nlrp6Q91WS2 869 aa19.63■□□□□ 0.73
Pcdha11-202ENSMUST00000115657 Ccdc9Q8VC31 543 aaKnown RBP19.61■□□□□ 0.73
Pcdha11-202ENSMUST00000115657 Gm38655A0A286YDK6 273 aa19.61■□□□□ 0.73
Pcdha11-202ENSMUST00000115657 1700123L14RikQ3V2K7 440 aa19.55■□□□□ 0.72
Pcdha11-202ENSMUST00000115657 BlmO88700 1416 aa19.51■□□□□ 0.71
Pcdha11-202ENSMUST00000115657 Wdr43Q6ZQL4 677 aaKnown RBP19.51■□□□□ 0.71
Pcdha11-202ENSMUST00000115657 Mapk8ip2Q9ERE9 830 aa19.5■□□□□ 0.71
Pcdha11-202ENSMUST00000115657 Setd5Q5XJV7 1441 aa19.48■□□□□ 0.71
Pcdha11-202ENSMUST00000115657 Ppp4r2Q0VGB7 417 aa19.47■□□□□ 0.71
Pcdha11-202ENSMUST00000115657 Atp1b4Q99ME6 356 aa19.46■□□□□ 0.71
Pcdha11-202ENSMUST00000115657 Erich6D3Z6S9 713 aa19.45■□□□□ 0.7
Pcdha11-202ENSMUST00000115657 Polr3glQ8R0C0 218 aa19.44■□□□□ 0.7
Pcdha11-202ENSMUST00000115657 Zbtb4Q5F293 982 aa19.42■□□□□ 0.7
Pcdha11-202ENSMUST00000115657 Eea1Q8BL66 1411 aa19.41■□□□□ 0.7
Pcdha11-202ENSMUST00000115657 Clstn2Q9ER65 966 aa19.4■□□□□ 0.7
Pcdha11-202ENSMUST00000115657 Mrs2Q5NCE8 434 aa19.4■□□□□ 0.7
Pcdha11-202ENSMUST00000115657 Rsf1E9PWW9 1441 aaKnown RBP19.35■□□□□ 0.69
Pcdha11-202ENSMUST00000115657 Aebp2Q9Z248 504 aaKnown RBP19.34■□□□□ 0.69
Pcdha11-202ENSMUST00000115657 Gm13695A2AK44 830 aa19.32■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 62.1 ms