RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Stag3O70576 1240 aa22.77■■□□□ 1.24
Col4a3bp-202ENSMUST00000109444 Slc4a3P16283 1227 aa22.75■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Rapgef2Q8CHG7 1496 aa22.75■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Sin3aQ60520 1274 aaKnown RBP22.74■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 MccE9PWI3 1003 aa22.73■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 UacaQ8CGB3 1411 aa22.72■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Smg6P61406 1418 aaKnown RBP22.72■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Ipo8Q7TMY7 1010 aa22.72■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Safb2Q80YR5 991 aaKnown RBP22.71■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 4933402E13RikQ9D4D2 429 aa22.71■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Carmil1Q6EDY6 1374 aa22.71■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Gm6268A2A3U9 297 aa22.71■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Speer4f1Q9D5Q6 258 aa22.71■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Dhx57Q6P5D3 1388 aaKnown RBP22.71■■□□□ 1.23
Col4a3bp-202ENSMUST00000109444 Dnttip2Q8R2M2 758 aaKnown RBP22.69■■□□□ 1.22
Col4a3bp-202ENSMUST00000109444 Stk24Q99KH8 431 aa22.66■■□□□ 1.22
Col4a3bp-202ENSMUST00000109444 Cabp1Q9JLK7 227 aa22.66■■□□□ 1.22
Col4a3bp-202ENSMUST00000109444 Gtf2e1Q9D0D5 440 aa22.65■■□□□ 1.22
Col4a3bp-202ENSMUST00000109444 Armcx1Q9CX83 456 aa22.64■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Plekhh2Q8C115 1491 aa22.63■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Trak1Q6PD31 939 aa22.62■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Synj1Q8CHC4 1574 aa22.62■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Stard8Q8K031 1019 aa22.6■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Golga2Q921M4 999 aa22.6■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Hsp90b1P08113 802 aaKnown RBP22.59■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Pde3bQ61409 1100 aa22.59■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Ifit1bl1D3Z6F0 470 aa22.59■■□□□ 1.21
Col4a3bp-202ENSMUST00000109444 Spryd3E9Q9B3 442 aa22.57■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Ankrd36D3Z4K0 1415 aa22.57■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Rpap1Q80TE0 1409 aa22.56■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 AampJ3QN89 436 aa22.56■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Nup155Q99P88 1391 aaKnown RBP22.55■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Nolc1E9Q5C9 702 aaKnown RBP22.55■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Gm973E9Q295 1059 aa22.54■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Rrp12Q6P5B0 1295 aaKnown RBP22.54■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Cecr2E9Q2Z1 1453 aa22.53■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Sart3Q9JLI8 962 aaKnown RBP22.52■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 PnnO35691 725 aaKnown RBP22.52■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Znf326O88291 580 aa22.52■■□□□ 1.2
Col4a3bp-202ENSMUST00000109444 Cttnbp2B9EJA2 1648 aa22.51■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Erich6bQ9D4S6 220 aa22.51■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Tnnt2P50752 301 aa22.49■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Cnga1P29974 684 aa22.49■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Pes1Q9EQ61 584 aaKnown RBP22.48■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Ccnb3Q810T2 1396 aa22.48■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Srcin1Q9QWI6 1250 aa22.47■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Ddrgk1Q80WW9 315 aa22.46■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 Ccar1Q8CH18 1146 aaKnown RBP22.46■■□□□ 1.19
Col4a3bp-202ENSMUST00000109444 U2af1Q9D883 239 aaKnown RBP22.45■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Irx6Q9ER75 438 aa22.45■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Usp47Q8BY87 1376 aa22.45■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Plppr3Q7TPB0 716 aa22.44■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 MsnP26041 577 aaKnown RBP22.44■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Mre11Q61216 706 aa22.44■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Dcaf11Q91VU6 549 aa22.44■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Smarca4Q3TKT4 1613 aaKnown RBP22.43■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Cux2P70298 1426 aa22.42■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Smarce1O54941 411 aaKnown RBP22.41■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Calcoco2A2A6M5 331 aa22.4■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Rtf1A2AQ19 715 aaKnown RBP22.4■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 1700019A02RikA0A087WPV9 146 aa22.4■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Atad2bE9Q166 1460 aaKnown RBP22.39■■□□□ 1.18
Col4a3bp-202ENSMUST00000109444 Mfap1aC0HKD8 439 aaKnown RBP22.39■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Mfap1bC0HKD9 439 aaKnown RBP22.39■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Gtf3c3Q3TMP1 882 aa22.39■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Cgnl1Q6AW69 1298 aa22.38■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Cux1P53564 1515 aa22.38■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Atp6v1dP57746 247 aa22.37■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Ylpm1Q9R0I7 1386 aaKnown RBP22.37■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 CrbnQ8C7D2 445 aa22.37■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Rock1P70335 1354 aa22.36■■□□□ 1.17
Col4a3bp-202ENSMUST00000109444 Lemd3Q9WU40 921 aa22.33■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Rsph3aQ3UFY4 516 aa22.32■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Phldb1Q6PDH0 1371 aaKnown RBP22.32■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Slc4a1apE9PX68 744 aa22.31■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Tmco5bQ80X59 307 aa22.31■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Cluap1Q8R3P7 413 aa22.3■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Ksr2Q3UVC0 959 aa22.3■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Vps8Q0P5W1 1427 aa22.3■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 RdxP26043 583 aaKnown RBP22.3■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 ChgaP26339 463 aaKnown RBP22.3■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 R3hcc1Q8BSI6 488 aa22.29■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 U2surpQ6NV83 1029 aaKnown RBP22.29■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Ralbp1Q62172 648 aa22.28■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Glipr1l2Q9CQ35 332 aa22.28■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Rsph4aQ8BYM7 716 aa22.27■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Pank3Q8R2W9 370 aa22.27■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Becn1O88597 448 aa22.27■■□□□ 1.16
Col4a3bp-202ENSMUST00000109444 Pcmtd1P59913 357 aa22.27■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Sh3bp5Q9Z131 463 aa22.27■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 CenpjQ569L8 1344 aa22.26■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 LrpprcQ6PB66 1392 aaKnown RBP22.26■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Dapk1Q80YE7 1442 aa22.25■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 VgfQ0VGU4 617 aa22.25■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Spag9Q58A65 1321 aaKnown RBP22.25■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Cspp1B2RX88 1205 aa22.24■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Cald1E9QA15 768 aaKnown RBP22.24■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 NgefQ8CHT1 710 aa22.24■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 AknaQ80VW7 1404 aa22.23■■□□□ 1.15
Col4a3bp-202ENSMUST00000109444 Znf710Q3U288 666 aa22.22■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms