RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Rhox8Q6VSS7 320 aa31.15■■■□□ 2.58
Col4a3bp-202ENSMUST00000109444 Rpgrip1Q9EPQ2 1331 aa29.77■■■□□ 2.36
Col4a3bp-202ENSMUST00000109444 Las1lA2BE28 776 aaKnown RBP28.23■■■□□ 2.11
Col4a3bp-202ENSMUST00000109444 Cngb1E1AZ71 1325 aa28.09■■■□□ 2.09
Col4a3bp-202ENSMUST00000109444 Ehmt2Q9Z148 1263 aaKnown RBP27.96■■■□□ 2.07
Col4a3bp-202ENSMUST00000109444 NischQ80TM9 1593 aa27.93■■■□□ 2.06
Col4a3bp-202ENSMUST00000109444 Ccdc136Q3TVA9 1136 aa27.64■■■□□ 2.01
Col4a3bp-202ENSMUST00000109444 Trim41Q5NCC3 630 aa27.51■■□□□ 1.99
Col4a3bp-202ENSMUST00000109444 Wdr66E9Q743 1299 aa27.43■■□□□ 1.98
Col4a3bp-202ENSMUST00000109444 Pelp1Q9DBD5 1123 aaKnown RBP27.39■■□□□ 1.98
Col4a3bp-202ENSMUST00000109444 Acin1Q9JIX8 1338 aaKnown RBP27.36■■□□□ 1.97
Col4a3bp-202ENSMUST00000109444 Esf1Q3V1V3 845 aaKnown RBP27.32■■□□□ 1.96
Col4a3bp-202ENSMUST00000109444 Ccdc180J3QNE4 1664 aa27.21■■□□□ 1.95
Col4a3bp-202ENSMUST00000109444 Zeb1Q64318 1117 aa27.2■■□□□ 1.95
Col4a3bp-202ENSMUST00000109444 Rtl1Q7M732 1744 aa27.07■■□□□ 1.92
Col4a3bp-202ENSMUST00000109444 Gab3Q8BSM5 595 aa27.04■■□□□ 1.92
Col4a3bp-202ENSMUST00000109444 NefmP08553 848 aa27.03■■□□□ 1.92
Col4a3bp-202ENSMUST00000109444 HrcG5E8J6 738 aa26.88■■□□□ 1.89
Col4a3bp-202ENSMUST00000109444 Npm2Q80W85 207 aa26.82■■□□□ 1.88
Col4a3bp-202ENSMUST00000109444 CenpbP27790 599 aa26.8■■□□□ 1.88
Col4a3bp-202ENSMUST00000109444 Ube2uB1AUC4 352 aa26.74■■□□□ 1.87
Col4a3bp-202ENSMUST00000109444 Stra8P70278 393 aa26.58■■□□□ 1.85
Col4a3bp-202ENSMUST00000109444 Myt1lP97500 1187 aa26.54■■□□□ 1.84
Col4a3bp-202ENSMUST00000109444 Myt1Q8CFC2 1127 aa26.33■■□□□ 1.81
Col4a3bp-202ENSMUST00000109444 Pcgf6Q99NA9 353 aa26.29■■□□□ 1.8
Col4a3bp-202ENSMUST00000109444 UbtfP25976 765 aaKnown RBP26.29■■□□□ 1.8
Col4a3bp-202ENSMUST00000109444 Abcc9P70170 1546 aa26.19■■□□□ 1.78
Col4a3bp-202ENSMUST00000109444 Cdk11bP24788 784 aaKnown RBP26.17■■□□□ 1.78
Col4a3bp-202ENSMUST00000109444 Tnnt3Q9QZ47 272 aa26.02■■□□□ 1.76
Col4a3bp-202ENSMUST00000109444 Nop58Q6DFW4 536 aaKnown RBP25.83■■□□□ 1.73
Col4a3bp-202ENSMUST00000109444 Amer1Q7TS75 1132 aa25.78■■□□□ 1.72
Col4a3bp-202ENSMUST00000109444 Zcchc6Q5BLK4 1491 aaKnown RBP25.74■■□□□ 1.71
Col4a3bp-202ENSMUST00000109444 Supt5hO55201 1082 aaKnown RBP25.65■■□□□ 1.7
Col4a3bp-202ENSMUST00000109444 Slc24a1Q91WD8 1130 aa25.65■■□□□ 1.7
Col4a3bp-202ENSMUST00000109444 TonslQ6NZL6 1363 aa25.56■■□□□ 1.68
Col4a3bp-202ENSMUST00000109444 NrdcQ8BHG1 1161 aa25.54■■□□□ 1.68
Col4a3bp-202ENSMUST00000109444 Anp32bQ9EST5 272 aaKnown RBP25.52■■□□□ 1.68
Col4a3bp-202ENSMUST00000109444 Rtl5Q5DTT4 599 aa25.52■■□□□ 1.68
Col4a3bp-202ENSMUST00000109444 NclP09405 707 aaKnown RBP25.47■■□□□ 1.67
Col4a3bp-202ENSMUST00000109444 Abcc8B2RUS7 1588 aa25.45■■□□□ 1.67
Col4a3bp-202ENSMUST00000109444 Mier1Q5UAK0 511 aa25.41■■□□□ 1.66
Col4a3bp-202ENSMUST00000109444 Il27Q8K3I6 234 aa25.39■■□□□ 1.66
Col4a3bp-202ENSMUST00000109444 Fam50aQ9WV03 339 aaKnown RBP25.37■■□□□ 1.65
Col4a3bp-202ENSMUST00000109444 Dcaf1Q80TR8 1506 aa25.34■■□□□ 1.65
Col4a3bp-202ENSMUST00000109444 NeflP08551 543 aa25.32■■□□□ 1.64
Col4a3bp-202ENSMUST00000109444 ClspnQ80YR7 1315 aa25.28■■□□□ 1.64
Col4a3bp-202ENSMUST00000109444 Ap3b1Q9Z1T1 1105 aa25.19■■□□□ 1.62
Col4a3bp-202ENSMUST00000109444 4933416C03RikQ3V063 378 aa25.17■■□□□ 1.62
Col4a3bp-202ENSMUST00000109444 Neurod1Q60867 357 aa25.08■■□□□ 1.61
Col4a3bp-202ENSMUST00000109444 Cep164Q5DU05 1446 aa25.06■■□□□ 1.6
Col4a3bp-202ENSMUST00000109444 Eif5bQ05D44 1216 aaKnown RBP25.06■■□□□ 1.6
Col4a3bp-202ENSMUST00000109444 Ttbk1Q6PCN3 1308 aa25.02■■□□□ 1.6
Col4a3bp-202ENSMUST00000109444 4930567H17RikQ3V0K5 233 aa25■■□□□ 1.59
Col4a3bp-202ENSMUST00000109444 Ppargc1bQ8VHJ7 1014 aa25■■□□□ 1.59
Col4a3bp-202ENSMUST00000109444 Anp32aO35381 247 aa24.99■■□□□ 1.59
Col4a3bp-202ENSMUST00000109444 Anks4bQ8K3X6 423 aa24.93■■□□□ 1.58
Col4a3bp-202ENSMUST00000109444 Brd4Q9ESU6 1400 aaKnown RBP24.92■■□□□ 1.58
Col4a3bp-202ENSMUST00000109444 Gm35339A0A140LHH9 1649 aa24.86■■□□□ 1.57
Col4a3bp-202ENSMUST00000109444 Aplp2Q06335 707 aa24.76■■□□□ 1.55
Col4a3bp-202ENSMUST00000109444 Os9Q8K2C7 672 aa24.75■■□□□ 1.55
Col4a3bp-202ENSMUST00000109444 Plekhg3Q4VAC9 1341 aa24.74■■□□□ 1.55
Col4a3bp-202ENSMUST00000109444 Sall2Q9QX96 1004 aa24.71■■□□□ 1.55
Col4a3bp-202ENSMUST00000109444 Ccer2J3QPU5 274 aa24.69■■□□□ 1.54
Col4a3bp-202ENSMUST00000109444 DiexfQ8BTT6 772 aaKnown RBP24.63■■□□□ 1.53
Col4a3bp-202ENSMUST00000109444 Clip1Q922J3 1391 aa24.62■■□□□ 1.53
Col4a3bp-202ENSMUST00000109444 Npm1Q61937 292 aaKnown RBP24.62■■□□□ 1.53
Col4a3bp-202ENSMUST00000109444 Rb1cc1Q9ESK9 1588 aa24.61■■□□□ 1.53
Col4a3bp-202ENSMUST00000109444 Lmod2Q3UHZ5 550 aa24.55■■□□□ 1.52
Col4a3bp-202ENSMUST00000109444 Chic1Q8CBW7 227 aa24.48■■□□□ 1.51
Col4a3bp-202ENSMUST00000109444 Hdac5Q9Z2V6 1113 aa24.48■■□□□ 1.51
Col4a3bp-202ENSMUST00000109444 Csrnp3P59055 597 aa24.47■■□□□ 1.51
Col4a3bp-202ENSMUST00000109444 DaxxO35613 739 aa24.35■■□□□ 1.49
Col4a3bp-202ENSMUST00000109444 Eid3Q3V124 375 aa24.32■■□□□ 1.48
Col4a3bp-202ENSMUST00000109444 Upf2A2AT37 1269 aaKnown RBP24.31■■□□□ 1.48
Col4a3bp-202ENSMUST00000109444 Calr4Q3TQS0 420 aa24.29■■□□□ 1.48
Col4a3bp-202ENSMUST00000109444 Nlrp6Q91WS2 869 aa24.19■■□□□ 1.46
Col4a3bp-202ENSMUST00000109444 Ccdc9Q8VC31 543 aaKnown RBP24.18■■□□□ 1.46
Col4a3bp-202ENSMUST00000109444 Baz1aO88379 1555 aa24.15■■□□□ 1.46
Col4a3bp-202ENSMUST00000109444 Mapk8ip2Q9ERE9 830 aa24.15■■□□□ 1.46
Col4a3bp-202ENSMUST00000109444 Hnrnpul2Q00PI9 745 aaKnown RBP24.13■■□□□ 1.45
Col4a3bp-202ENSMUST00000109444 Gm38655A0A286YDK6 273 aa24.1■■□□□ 1.45
Col4a3bp-202ENSMUST00000109444 NacadQ5SWP3 1504 aa24.09■■□□□ 1.45
Col4a3bp-202ENSMUST00000109444 Wdr43Q6ZQL4 677 aaKnown RBP24.09■■□□□ 1.45
Col4a3bp-202ENSMUST00000109444 Ppp4r2Q0VGB7 417 aa24.08■■□□□ 1.44
Col4a3bp-202ENSMUST00000109444 Golga3P55937 1487 aa24.07■■□□□ 1.44
Col4a3bp-202ENSMUST00000109444 Zbtb7cQ8VCZ7 619 aa24.05■■□□□ 1.44
Col4a3bp-202ENSMUST00000109444 BlmO88700 1416 aa24.01■■□□□ 1.43
Col4a3bp-202ENSMUST00000109444 Mrs2Q5NCE8 434 aa23.95■■□□□ 1.42
Col4a3bp-202ENSMUST00000109444 Setd5Q5XJV7 1441 aa23.93■■□□□ 1.42
Col4a3bp-202ENSMUST00000109444 1700123L14RikQ3V2K7 440 aa23.9■■□□□ 1.42
Col4a3bp-202ENSMUST00000109444 Clstn2Q9ER65 966 aa23.89■■□□□ 1.42
Col4a3bp-202ENSMUST00000109444 Erich6D3Z6S9 713 aa23.88■■□□□ 1.41
Col4a3bp-202ENSMUST00000109444 Hsp90aa1P07901 733 aaKnown RBP23.85■■□□□ 1.41
Col4a3bp-202ENSMUST00000109444 Zbtb4Q5F293 982 aa23.84■■□□□ 1.41
Col4a3bp-202ENSMUST00000109444 Polr3glQ8R0C0 218 aa23.82■■□□□ 1.4
Col4a3bp-202ENSMUST00000109444 Aebp2Q9Z248 504 aaKnown RBP23.81■■□□□ 1.4
Col4a3bp-202ENSMUST00000109444 Eea1Q8BL66 1411 aa23.79■■□□□ 1.4
Col4a3bp-202ENSMUST00000109444 Chic2Q9D9G3 165 aa23.75■■□□□ 1.39
Col4a3bp-202ENSMUST00000109444 Gm13697A2AK42 830 aa23.74■■□□□ 1.39
Col4a3bp-202ENSMUST00000109444 Ubl4bQ9CQ84 188 aa23.68■■□□□ 1.38
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms