RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Pak3Q61036 559 aa13.2□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Chmp3Q9CQ10 224 aa13.2□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Gm38655A0A286YDK6 273 aa13.19□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Tnnt1O88346 262 aa13.19□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Tomm22Q9CPQ3 142 aa13.19□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Bcl11bQ99PV8 884 aa13.18□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Armcx1Q9CX83 456 aa13.17□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Ap3b2Q9JME5 1082 aa13.17□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Iffo2Q8R2V2 512 aa13.17□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Chrna2Q91X60 512 aa13.16□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Mia2Q91ZV0 1396 aa13.16□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Znf316Q6PGE4 1016 aa13.16□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Prm3Q62100 101 aa13.16□□□□□ -0.3
Scn9a-201ENSMUST00000100063 Ccdc9Q8VC31 543 aaKnown RBP13.15□□□□□ -0.3
Scn9a-201ENSMUST00000100063 MecomP14404 1042 aa13.15□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Gtf2e1Q9D0D5 440 aa13.14□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Birc3O08863 600 aa13.14□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Ecm2Q5FW85 670 aa13.12□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Kif27Q7M6Z4 1394 aa13.12□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Ppm1gQ61074 542 aa13.11□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Golga3P55937 1487 aa13.11□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Map4P27546 1125 aaKnown RBP13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Sall2Q9QX96 1004 aa13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Mak16Q8BGS0 296 aaKnown RBP13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 PtmsQ9D0J8 101 aaKnown RBP13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Calcoco2A2A6M5 331 aa13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Tmf1B9EKI3 1091 aa13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Ddx11Q6AXC6 880 aa13.1□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Ccdc47Q9D024 483 aaKnown RBP13.09□□□□□ -0.31
Scn9a-201ENSMUST00000100063 R3hcc1Q8BSI6 488 aa13.09□□□□□ -0.31
Scn9a-201ENSMUST00000100063 Baz1aO88379 1555 aa13.08□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Pds5bQ4VA53 1446 aaKnown RBP13.07□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Kri1Q8VDQ9 704 aaKnown RBP13.07□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Ifit1bl1D3Z6F0 470 aa13.06□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Anks4bQ8K3X6 423 aa13.06□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Mbd3Q9Z2D8 285 aaKnown RBP13.06□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Pcmtd1P59913 357 aa13.06□□□□□ -0.32
Scn9a-201ENSMUST00000100063 U2af1Q9D883 239 aaKnown RBP13.06□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Rpap1Q80TE0 1409 aa13.06□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Paf1Q8K2T8 535 aa13.05□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Rwdd1Q9CQK7 243 aa13.05□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Tmco5bQ80X59 307 aa13.04□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Ccar1Q8CH18 1146 aaKnown RBP13.03□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Fbln2P37889 1221 aa13.03□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Tpd52l1O54818 204 aa13.03□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Brpf1B2RRD7 1212 aa13.02□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Odf2A3KGV1 830 aaKnown RBP13.02□□□□□ -0.32
Scn9a-201ENSMUST00000100063 Dbr1Q923B1 550 aa13.01□□□□□ -0.33
Scn9a-201ENSMUST00000100063 CgnP59242 1191 aa13.01□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Tpm4Q6IRU2 248 aa13□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Dhx57Q6P5D3 1388 aaKnown RBP13□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Smc4Q8CG47 1286 aa13□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Dhx16G3X8X0 1044 aaKnown RBP12.99□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Smarce1O54941 411 aaKnown RBP12.99□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Kif3bQ61771 747 aa12.98□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Cald1E9QA15 768 aaKnown RBP12.98□□□□□ -0.33
Scn9a-201ENSMUST00000100063 CenpjQ569L8 1344 aa12.97□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Sf3b2Q3UJB0 878 aaKnown RBP12.97□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Gm21969J3QJZ1 289 aa12.97□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Cabp4Q8VHC5 271 aa12.97□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Pabpn1Q8CCS6 302 aaKnown RBP12.96□□□□□ -0.33
Scn9a-201ENSMUST00000100063 Rab11fip3Q8CHD8 1047 aa12.96□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Pibf1E9Q6K3 756 aa12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Speer4f1Q9D5Q6 258 aa12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Tpm3P21107 285 aaKnown RBP12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Rock2P70336 1388 aa12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Chmp7Q8R1T1 451 aa12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Krt82Q99M74 516 aa12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Rundc1Q0VDN7 615 aa12.95□□□□□ -0.34
Scn9a-201ENSMUST00000100063 B4galnt3Q6L8S8 986 aa12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Tpm2P58774 284 aa12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Ccer1Q9CQL2 403 aa12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Golga2Q921M4 999 aa12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Pip4k2bQ80XI4 416 aa12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 CrebrfQ8CDG5 640 aaKnown RBP12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 AppP12023 770 aa12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Utp14aQ640M1 767 aaKnown RBP12.94□□□□□ -0.34
Scn9a-201ENSMUST00000100063 AU015836B2RUM3 263 aa12.93□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Sirt1Q923E4 737 aa12.93□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Erich6bQ9D4S6 220 aa12.93□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Ccdc43Q9CR29 222 aaKnown RBP12.92□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Pkd2O35245 966 aa12.92□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Atf3Q60765 181 aa12.92□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Trak1Q6PD31 939 aa12.92□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Dcaf11Q91VU6 549 aa12.92□□□□□ -0.34
Scn9a-201ENSMUST00000100063 SetQ9EQU5 289 aaKnown RBP12.91□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Mical1Q8VDP3 1048 aa12.91□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Slc4a10Q5DTL9 1118 aa12.91□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Stard8Q8K031 1019 aa12.91□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Kcnn1Q9EQR3 537 aa12.9□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Stk31Q99MW1 1018 aa12.9□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Plekhh2Q8C115 1491 aa12.9□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Fyb1O35601 819 aa12.9□□□□□ -0.34
Scn9a-201ENSMUST00000100063 Baz1bQ9Z277 1479 aa12.9□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Fyco1Q8VDC1 1437 aa12.89□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Eva1cP58659 440 aa12.89□□□□□ -0.35
Scn9a-201ENSMUST00000100063 UvssaQ9D479 717 aa12.89□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Znf330Q922H9 316 aa12.89□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Spryd3E9Q9B3 442 aa12.88□□□□□ -0.35
Scn9a-201ENSMUST00000100063 Nup155Q99P88 1391 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms