Protein–RNA interactions for Protein: Q9EQR3

Kcnn1, Small conductance calcium-activated potassium channel protein 1, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnn1Q9EQR3 Gm25239-201ENSMUST00000174915 86 ntBASIC49.92■■■■■ 5.58
Kcnn1Q9EQR3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC46.61■■■■■ 5.05
Kcnn1Q9EQR3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC45.92■■■■■ 4.94
Kcnn1Q9EQR3 Gm24109-201ENSMUST00000175489 103 ntBASIC43.8■■■■■ 4.6
Kcnn1Q9EQR3 Gm15042-201ENSMUST00000120212 883 ntBASIC42.75■■■■■ 4.43
Kcnn1Q9EQR3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC42.5■■■■■ 4.39
Kcnn1Q9EQR3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC42.2■■■■■ 4.35
Kcnn1Q9EQR3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC41.96■■■■■ 4.31
Kcnn1Q9EQR3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC41.65■■■■■ 4.26
Kcnn1Q9EQR3 Gm23366-201ENSMUST00000175022 89 ntBASIC41.63■■■■■ 4.25
Kcnn1Q9EQR3 Gm15045-201ENSMUST00000117359 883 ntBASIC41.53■■■■■ 4.24
Kcnn1Q9EQR3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC41.14■■■■■ 4.18
Kcnn1Q9EQR3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC40.86■■■■■ 4.13
Kcnn1Q9EQR3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Kcnn1Q9EQR3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
Kcnn1Q9EQR3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC40.56■■■■■ 4.08
Kcnn1Q9EQR3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Kcnn1Q9EQR3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Kcnn1Q9EQR3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC39.88■■■■□ 3.97
Kcnn1Q9EQR3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
Kcnn1Q9EQR3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC39.7■■■■□ 3.95
Kcnn1Q9EQR3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Kcnn1Q9EQR3 Gm25238-201ENSMUST00000174914 89 ntBASIC39.66■■■■□ 3.94
Kcnn1Q9EQR3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
Kcnn1Q9EQR3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Kcnn1Q9EQR3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Kcnn1Q9EQR3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC38.88■■■■□ 3.81
Kcnn1Q9EQR3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.85■■■■□ 3.81
Kcnn1Q9EQR3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC38.67■■■■□ 3.78
Kcnn1Q9EQR3 Gm25262-201ENSMUST00000174934 133 ntBASIC38.59■■■■□ 3.77
Kcnn1Q9EQR3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC38.3■■■■□ 3.72
Kcnn1Q9EQR3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.27■■■■□ 3.72
Kcnn1Q9EQR3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.23■■■■□ 3.71
Kcnn1Q9EQR3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Kcnn1Q9EQR3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC38.13■■■■□ 3.69
Kcnn1Q9EQR3 Gm26115-201ENSMUST00000175605 87 ntBASIC38.03■■■■□ 3.68
Kcnn1Q9EQR3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC38.03■■■■□ 3.68
Kcnn1Q9EQR3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC38.02■■■■□ 3.68
Kcnn1Q9EQR3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Kcnn1Q9EQR3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.92■■■■□ 3.66
Kcnn1Q9EQR3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC37.84■■■■□ 3.65
Kcnn1Q9EQR3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Kcnn1Q9EQR3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
Kcnn1Q9EQR3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Kcnn1Q9EQR3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
Kcnn1Q9EQR3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC37.65■■■■□ 3.62
Kcnn1Q9EQR3 Gm8109-201ENSMUST00000194076 746 ntBASIC37.63■■■■□ 3.61
Kcnn1Q9EQR3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Kcnn1Q9EQR3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Kcnn1Q9EQR3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Kcnn1Q9EQR3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.34■■■■□ 3.57
Kcnn1Q9EQR3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.31■■■■□ 3.56
Kcnn1Q9EQR3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.28■■■■□ 3.56
Kcnn1Q9EQR3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC37.27■■■■□ 3.56
Kcnn1Q9EQR3 Gm27325-201ENSMUST00000175467 74 ntBASIC37.24■■■■□ 3.55
Kcnn1Q9EQR3 Rab21-202ENSMUST00000218831 843 ntBASIC37.22■■■■□ 3.55
Kcnn1Q9EQR3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
Kcnn1Q9EQR3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.01■■■■□ 3.52
Kcnn1Q9EQR3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Kcnn1Q9EQR3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
Kcnn1Q9EQR3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC36.79■■■■□ 3.48
Kcnn1Q9EQR3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC36.73■■■■□ 3.47
Kcnn1Q9EQR3 Psd-208ENSMUST00000224556 2034 ntBASIC36.7■■■■□ 3.47
Kcnn1Q9EQR3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Kcnn1Q9EQR3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.62■■■■□ 3.45
Kcnn1Q9EQR3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC36.58■■■■□ 3.45
Kcnn1Q9EQR3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.55■■■■□ 3.44
Kcnn1Q9EQR3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Kcnn1Q9EQR3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Kcnn1Q9EQR3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Kcnn1Q9EQR3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
Kcnn1Q9EQR3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Kcnn1Q9EQR3 Gm24804-201ENSMUST00000174982 85 ntBASIC36.25■■■■□ 3.39
Kcnn1Q9EQR3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Kcnn1Q9EQR3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.14■■■■□ 3.38
Kcnn1Q9EQR3 Gm17082-201ENSMUST00000166043 1091 ntBASIC36.08■■■■□ 3.37
Kcnn1Q9EQR3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Kcnn1Q9EQR3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36■■■■□ 3.35
Kcnn1Q9EQR3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.98■■■■□ 3.35
Kcnn1Q9EQR3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.98■■■■□ 3.35
Kcnn1Q9EQR3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.97■■■■□ 3.35
Kcnn1Q9EQR3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35.85■■■■□ 3.33
Kcnn1Q9EQR3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.84■■■■□ 3.33
Kcnn1Q9EQR3 Gm27322-201ENSMUST00000184007 104 ntBASIC35.8■■■■□ 3.32
Kcnn1Q9EQR3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.8■■■■□ 3.32
Kcnn1Q9EQR3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Kcnn1Q9EQR3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC35.75■■■■□ 3.31
Kcnn1Q9EQR3 Zfp131-205ENSMUST00000223812 663 ntBASIC35.69■■■■□ 3.3
Kcnn1Q9EQR3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Kcnn1Q9EQR3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Kcnn1Q9EQR3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35.67■■■■□ 3.3
Kcnn1Q9EQR3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
Kcnn1Q9EQR3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Kcnn1Q9EQR3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
Kcnn1Q9EQR3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Kcnn1Q9EQR3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC35.54■■■■□ 3.28
Kcnn1Q9EQR3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Kcnn1Q9EQR3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35.53■■■■□ 3.28
Kcnn1Q9EQR3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35.51■■■■□ 3.28
Kcnn1Q9EQR3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms