RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Tmf1B9EKI3 1091 aa22.28■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Speer4f1Q9D5Q6 258 aa22.27■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Sin3aQ60520 1274 aaKnown RBP22.27■■□□□ 1.16
Ptpre-201ENSMUST00000073961 Mak16Q8BGS0 296 aaKnown RBP22.26■■□□□ 1.15
Ptpre-201ENSMUST00000073961 Aebp1Q640N1 1128 aa22.26■■□□□ 1.15
Ptpre-201ENSMUST00000073961 PnnO35691 725 aaKnown RBP22.25■■□□□ 1.15
Ptpre-201ENSMUST00000073961 Znf326O88291 580 aa22.25■■□□□ 1.15
Ptpre-201ENSMUST00000073961 Mphosph9A6H5Y1 991 aa22.25■■□□□ 1.15
Ptpre-201ENSMUST00000073961 1700019A02RikA0A087WPV9 146 aa22.24■■□□□ 1.15
Ptpre-201ENSMUST00000073961 Pes1Q9EQ61 584 aaKnown RBP22.24■■□□□ 1.15
Ptpre-201ENSMUST00000073961 CntlnA2AM05 1397 aa22.23■■□□□ 1.15
Ptpre-201ENSMUST00000073961 Dnttip2Q8R2M2 758 aaKnown RBP22.23■■□□□ 1.15
Ptpre-201ENSMUST00000073961 PtmsQ9D0J8 101 aaKnown RBP22.23■■□□□ 1.15
Ptpre-201ENSMUST00000073961 NgefQ8CHT1 710 aa22.19■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Gtf2e1Q9D0D5 440 aa22.19■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Ifit1bl1D3Z6F0 470 aa22.18■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Erich6bQ9D4S6 220 aa22.15■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Pds5bQ4VA53 1446 aaKnown RBP22.15■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Trak1Q6PD31 939 aa22.15■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Ipo8Q7TMY7 1010 aa22.15■■□□□ 1.14
Ptpre-201ENSMUST00000073961 Cabp1Q9JLK7 227 aa22.13■■□□□ 1.13
Ptpre-201ENSMUST00000073961 Golga2Q921M4 999 aa22.11■■□□□ 1.13
Ptpre-201ENSMUST00000073961 Rock2P70336 1388 aa22.09■■□□□ 1.13
Ptpre-201ENSMUST00000073961 Rpap1Q80TE0 1409 aa22.09■■□□□ 1.13
Ptpre-201ENSMUST00000073961 Sart3Q9JLI8 962 aaKnown RBP22.09■■□□□ 1.13
Ptpre-201ENSMUST00000073961 Rtn4Q99P72 1162 aaKnown RBP22.07■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Rtf1A2AQ19 715 aaKnown RBP22.07■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Gm973E9Q295 1059 aa22.07■■□□□ 1.12
Ptpre-201ENSMUST00000073961 U2af1Q9D883 239 aaKnown RBP22.07■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Sh3bp5Q9Z131 463 aa22.06■■□□□ 1.12
Ptpre-201ENSMUST00000073961 U2surpQ6NV83 1029 aaKnown RBP22.05■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Pde3bQ61409 1100 aa22.03■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Tnnt2P50752 301 aa22.03■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Dcaf11Q91VU6 549 aa22.03■■□□□ 1.12
Ptpre-201ENSMUST00000073961 Plekhh2Q8C115 1491 aa22.01■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Dhx57Q6P5D3 1388 aaKnown RBP22.01■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Nup155Q99P88 1391 aaKnown RBP22.01■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Mfap1aC0HKD8 439 aaKnown RBP22.01■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Mfap1bC0HKD9 439 aaKnown RBP22.01■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Pcmtd1P59913 357 aa22■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Tmco5bQ80X59 307 aa22■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Cluap1Q8R3P7 413 aa21.99■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Crybg2B7ZCC2 1516 aa21.99■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Smg6P61406 1418 aaKnown RBP21.98■■□□□ 1.11
Ptpre-201ENSMUST00000073961 MsnP26041 577 aaKnown RBP21.98■■□□□ 1.11
Ptpre-201ENSMUST00000073961 CrbnQ8C7D2 445 aa21.97■■□□□ 1.11
Ptpre-201ENSMUST00000073961 CftrP26361 1476 aa21.97■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Rapgef2Q8CHG7 1496 aa21.96■■□□□ 1.11
Ptpre-201ENSMUST00000073961 Nolc1E9Q5C9 702 aaKnown RBP21.95■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Stk26Q99JT2 416 aa21.95■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Srcin1Q9QWI6 1250 aa21.95■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Carmil1Q6EDY6 1374 aa21.95■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Clstn1Q9EPL2 979 aa21.94■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Ccar1Q8CH18 1146 aaKnown RBP21.94■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Rassf8Q8CJ96 419 aa21.94■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Rrp12Q6P5B0 1295 aaKnown RBP21.94■■□□□ 1.1
Ptpre-201ENSMUST00000073961 UacaQ8CGB3 1411 aa21.94■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Calcoco2A2A6M5 331 aa21.93■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Sycp2Q9CUU3 1500 aa21.92■■□□□ 1.1
Ptpre-201ENSMUST00000073961 AknaQ80VW7 1404 aa21.9■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Smarce1O54941 411 aaKnown RBP21.9■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Stard8Q8K031 1019 aa21.9■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Znf330Q922H9 316 aa21.9■■□□□ 1.1
Ptpre-201ENSMUST00000073961 4933402E13RikQ9D4D2 429 aa21.89■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Lemd3Q9WU40 921 aa21.89■■□□□ 1.1
Ptpre-201ENSMUST00000073961 Ksr2Q3UVC0 959 aa21.89■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Q3TQI7 289 aaKnown RBP21.88■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Plin1Q8CGN5 517 aa21.87■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Ccnb3Q810T2 1396 aa21.87■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Slc4a1apE9PX68 744 aa21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 MyclP10166 368 aa21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Iffo2Q8R2V2 512 aa21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Birc3O08863 600 aa21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Anapc15P60007 132 aa21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Eif4g2Q62448 906 aaKnown RBP21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Spag9Q58A65 1321 aaKnown RBP21.86■■□□□ 1.09
Ptpre-201ENSMUST00000073961 ChgaP26339 463 aaKnown RBP21.85■■□□□ 1.09
Ptpre-201ENSMUST00000073961 R3hcc1Q8BSI6 488 aa21.85■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Usp47Q8BY87 1376 aa21.85■■□□□ 1.09
Ptpre-201ENSMUST00000073961 Smarca2Q6DIC0 1577 aa21.83■■□□□ 1.09
Ptpre-201ENSMUST00000073961 CgnP59242 1191 aa21.83■■□□□ 1.08
Ptpre-201ENSMUST00000073961 GorabQ8BRM2 368 aa21.83■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Ylpm1Q9R0I7 1386 aaKnown RBP21.83■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Cux2P70298 1426 aa21.82■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Ddrgk1Q80WW9 315 aa21.82■■□□□ 1.08
Ptpre-201ENSMUST00000073961 RdxP26043 583 aaKnown RBP21.82■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Synj1Q8CHC4 1574 aa21.81■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Atp6v1dP57746 247 aa21.81■■□□□ 1.08
Ptpre-201ENSMUST00000073961 MecomP14404 1042 aa21.81■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Znf316Q6PGE4 1016 aa21.8■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Cgnl1Q6AW69 1298 aa21.8■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Cald1E9QA15 768 aaKnown RBP21.79■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Pank3Q8R2W9 370 aa21.78■■□□□ 1.08
Ptpre-201ENSMUST00000073961 CenpjQ569L8 1344 aa21.78■■□□□ 1.08
Ptpre-201ENSMUST00000073961 Arid3cA6PWV5 409 aa21.77■■□□□ 1.08
Ptpre-201ENSMUST00000073961 SlkO54988 1233 aa21.76■■□□□ 1.07
Ptpre-201ENSMUST00000073961 Rsph3aQ3UFY4 516 aa21.76■■□□□ 1.07
Ptpre-201ENSMUST00000073961 Mre11Q61216 706 aa21.76■■□□□ 1.07
Ptpre-201ENSMUST00000073961 Cecr2E9Q2Z1 1453 aa21.75■■□□□ 1.07
Ptpre-201ENSMUST00000073961 Kif3bQ61771 747 aa21.75■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms