RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Rhox8Q6VSS7 320 aa30.76■■■□□ 2.52
Ptpre-201ENSMUST00000073961 Rpgrip1Q9EPQ2 1331 aa28.75■■■□□ 2.19
Ptpre-201ENSMUST00000073961 Ehmt2Q9Z148 1263 aaKnown RBP27.79■■■□□ 2.04
Ptpre-201ENSMUST00000073961 Las1lA2BE28 776 aaKnown RBP27.52■■■□□ 2
Ptpre-201ENSMUST00000073961 Cngb1E1AZ71 1325 aa27.47■■□□□ 1.99
Ptpre-201ENSMUST00000073961 Ccdc136Q3TVA9 1136 aa27.26■■□□□ 1.95
Ptpre-201ENSMUST00000073961 Wdr66E9Q743 1299 aa27.16■■□□□ 1.94
Ptpre-201ENSMUST00000073961 Esf1Q3V1V3 845 aaKnown RBP27.02■■□□□ 1.92
Ptpre-201ENSMUST00000073961 Zeb1Q64318 1117 aa26.89■■□□□ 1.9
Ptpre-201ENSMUST00000073961 NischQ80TM9 1593 aa26.89■■□□□ 1.89
Ptpre-201ENSMUST00000073961 Pelp1Q9DBD5 1123 aaKnown RBP26.87■■□□□ 1.89
Ptpre-201ENSMUST00000073961 Trim41Q5NCC3 630 aa26.83■■□□□ 1.89
Ptpre-201ENSMUST00000073961 Gab3Q8BSM5 595 aa26.78■■□□□ 1.88
Ptpre-201ENSMUST00000073961 Ube2uB1AUC4 352 aa26.65■■□□□ 1.86
Ptpre-201ENSMUST00000073961 Npm2Q80W85 207 aa26.54■■□□□ 1.84
Ptpre-201ENSMUST00000073961 Acin1Q9JIX8 1338 aaKnown RBP26.52■■□□□ 1.84
Ptpre-201ENSMUST00000073961 Myt1lP97500 1187 aa26.32■■□□□ 1.8
Ptpre-201ENSMUST00000073961 NefmP08553 848 aa26.25■■□□□ 1.79
Ptpre-201ENSMUST00000073961 CenpbP27790 599 aa26.19■■□□□ 1.78
Ptpre-201ENSMUST00000073961 Ccdc180J3QNE4 1664 aa26.13■■□□□ 1.77
Ptpre-201ENSMUST00000073961 Stra8P70278 393 aa25.95■■□□□ 1.74
Ptpre-201ENSMUST00000073961 UbtfP25976 765 aaKnown RBP25.94■■□□□ 1.74
Ptpre-201ENSMUST00000073961 Rtl1Q7M732 1744 aa25.87■■□□□ 1.73
Ptpre-201ENSMUST00000073961 HrcG5E8J6 738 aa25.87■■□□□ 1.73
Ptpre-201ENSMUST00000073961 Amer1Q7TS75 1132 aa25.64■■□□□ 1.7
Ptpre-201ENSMUST00000073961 Cdk11bP24788 784 aaKnown RBP25.57■■□□□ 1.68
Ptpre-201ENSMUST00000073961 Pcgf6Q99NA9 353 aa25.55■■□□□ 1.68
Ptpre-201ENSMUST00000073961 Slc24a1Q91WD8 1130 aa25.54■■□□□ 1.68
Ptpre-201ENSMUST00000073961 Myt1Q8CFC2 1127 aa25.32■■□□□ 1.64
Ptpre-201ENSMUST00000073961 Tnnt3Q9QZ47 272 aa25.3■■□□□ 1.64
Ptpre-201ENSMUST00000073961 Nop58Q6DFW4 536 aaKnown RBP25.24■■□□□ 1.63
Ptpre-201ENSMUST00000073961 Il27Q8K3I6 234 aa25.22■■□□□ 1.63
Ptpre-201ENSMUST00000073961 Zcchc6Q5BLK4 1491 aaKnown RBP25.15■■□□□ 1.62
Ptpre-201ENSMUST00000073961 NrdcQ8BHG1 1161 aa25.13■■□□□ 1.61
Ptpre-201ENSMUST00000073961 NclP09405 707 aaKnown RBP25.08■■□□□ 1.6
Ptpre-201ENSMUST00000073961 Fam50aQ9WV03 339 aaKnown RBP25.08■■□□□ 1.6
Ptpre-201ENSMUST00000073961 Anp32bQ9EST5 272 aaKnown RBP25.07■■□□□ 1.6
Ptpre-201ENSMUST00000073961 Supt5hO55201 1082 aaKnown RBP25.04■■□□□ 1.6
Ptpre-201ENSMUST00000073961 Abcc9P70170 1546 aa25.01■■□□□ 1.59
Ptpre-201ENSMUST00000073961 Ap3b1Q9Z1T1 1105 aa25.01■■□□□ 1.59
Ptpre-201ENSMUST00000073961 TonslQ6NZL6 1363 aa24.98■■□□□ 1.59
Ptpre-201ENSMUST00000073961 Ttbk1Q6PCN3 1308 aa24.94■■□□□ 1.58
Ptpre-201ENSMUST00000073961 NeflP08551 543 aa24.93■■□□□ 1.58
Ptpre-201ENSMUST00000073961 Neurod1Q60867 357 aa24.9■■□□□ 1.58
Ptpre-201ENSMUST00000073961 4933416C03RikQ3V063 378 aa24.89■■□□□ 1.58
Ptpre-201ENSMUST00000073961 Eif5bQ05D44 1216 aaKnown RBP24.85■■□□□ 1.57
Ptpre-201ENSMUST00000073961 Ppargc1bQ8VHJ7 1014 aa24.85■■□□□ 1.57
Ptpre-201ENSMUST00000073961 Mier1Q5UAK0 511 aa24.81■■□□□ 1.56
Ptpre-201ENSMUST00000073961 4930567H17RikQ3V0K5 233 aa24.72■■□□□ 1.55
Ptpre-201ENSMUST00000073961 Rtl5Q5DTT4 599 aa24.72■■□□□ 1.55
Ptpre-201ENSMUST00000073961 Os9Q8K2C7 672 aa24.63■■□□□ 1.53
Ptpre-201ENSMUST00000073961 ClspnQ80YR7 1315 aa24.57■■□□□ 1.52
Ptpre-201ENSMUST00000073961 Gm35339A0A140LHH9 1649 aa24.53■■□□□ 1.52
Ptpre-201ENSMUST00000073961 Anp32aO35381 247 aa24.36■■□□□ 1.49
Ptpre-201ENSMUST00000073961 Plekhg3Q4VAC9 1341 aa24.35■■□□□ 1.49
Ptpre-201ENSMUST00000073961 Abcc8B2RUS7 1588 aa24.35■■□□□ 1.49
Ptpre-201ENSMUST00000073961 Lmod2Q3UHZ5 550 aa24.28■■□□□ 1.48
Ptpre-201ENSMUST00000073961 Dcaf1Q80TR8 1506 aa24.26■■□□□ 1.47
Ptpre-201ENSMUST00000073961 Npm1Q61937 292 aaKnown RBP24.21■■□□□ 1.47
Ptpre-201ENSMUST00000073961 Cep164Q5DU05 1446 aa24.13■■□□□ 1.45
Ptpre-201ENSMUST00000073961 Anks4bQ8K3X6 423 aa24.08■■□□□ 1.45
Ptpre-201ENSMUST00000073961 Brd4Q9ESU6 1400 aaKnown RBP24.08■■□□□ 1.44
Ptpre-201ENSMUST00000073961 Zbtb7cQ8VCZ7 619 aa24.06■■□□□ 1.44
Ptpre-201ENSMUST00000073961 Sall2Q9QX96 1004 aa24.06■■□□□ 1.44
Ptpre-201ENSMUST00000073961 Clip1Q922J3 1391 aa24.01■■□□□ 1.43
Ptpre-201ENSMUST00000073961 DaxxO35613 739 aa24■■□□□ 1.43
Ptpre-201ENSMUST00000073961 Hnrnpul2Q00PI9 745 aaKnown RBP24■■□□□ 1.43
Ptpre-201ENSMUST00000073961 DiexfQ8BTT6 772 aaKnown RBP23.99■■□□□ 1.43
Ptpre-201ENSMUST00000073961 Eid3Q3V124 375 aa23.95■■□□□ 1.42
Ptpre-201ENSMUST00000073961 Mapk8ip2Q9ERE9 830 aa23.95■■□□□ 1.42
Ptpre-201ENSMUST00000073961 Nlrp6Q91WS2 869 aa23.91■■□□□ 1.42
Ptpre-201ENSMUST00000073961 Csrnp3P59055 597 aa23.91■■□□□ 1.42
Ptpre-201ENSMUST00000073961 Aplp2Q06335 707 aa23.9■■□□□ 1.42
Ptpre-201ENSMUST00000073961 Ccer2J3QPU5 274 aa23.89■■□□□ 1.42
Ptpre-201ENSMUST00000073961 Chic1Q8CBW7 227 aa23.87■■□□□ 1.41
Ptpre-201ENSMUST00000073961 Gm38655A0A286YDK6 273 aa23.85■■□□□ 1.41
Ptpre-201ENSMUST00000073961 Hdac5Q9Z2V6 1113 aa23.84■■□□□ 1.41
Ptpre-201ENSMUST00000073961 Zbtb4Q5F293 982 aa23.82■■□□□ 1.4
Ptpre-201ENSMUST00000073961 Erich6D3Z6S9 713 aa23.77■■□□□ 1.4
Ptpre-201ENSMUST00000073961 Rb1cc1Q9ESK9 1588 aa23.74■■□□□ 1.39
Ptpre-201ENSMUST00000073961 Gm13697A2AK42 830 aa23.73■■□□□ 1.39
Ptpre-201ENSMUST00000073961 Calr4Q3TQS0 420 aa23.72■■□□□ 1.39
Ptpre-201ENSMUST00000073961 Polr3glQ8R0C0 218 aa23.69■■□□□ 1.38
Ptpre-201ENSMUST00000073961 Upf2A2AT37 1269 aaKnown RBP23.63■■□□□ 1.37
Ptpre-201ENSMUST00000073961 Atp1b4Q99ME6 356 aa23.62■■□□□ 1.37
Ptpre-201ENSMUST00000073961 Ppp4r2Q0VGB7 417 aa23.62■■□□□ 1.37
Ptpre-201ENSMUST00000073961 Ifnlr1Q8CGK5 535 aa23.58■■□□□ 1.37
Ptpre-201ENSMUST00000073961 Prdm10Q3UTQ7 1184 aa23.58■■□□□ 1.37
Ptpre-201ENSMUST00000073961 ArxO35085 564 aa23.53■■□□□ 1.36
Ptpre-201ENSMUST00000073961 Wdr43Q6ZQL4 677 aaKnown RBP23.5■■□□□ 1.35
Ptpre-201ENSMUST00000073961 Mrs2Q5NCE8 434 aa23.46■■□□□ 1.35
Ptpre-201ENSMUST00000073961 BlmO88700 1416 aa23.45■■□□□ 1.34
Ptpre-201ENSMUST00000073961 Fkbp15Q6P9Q6 1216 aaKnown RBP23.45■■□□□ 1.34
Ptpre-201ENSMUST00000073961 Chic2Q9D9G3 165 aa23.42■■□□□ 1.34
Ptpre-201ENSMUST00000073961 Gm13695A2AK44 830 aa23.36■■□□□ 1.33
Ptpre-201ENSMUST00000073961 Rad21Q61550 635 aaKnown RBP23.36■■□□□ 1.33
Ptpre-201ENSMUST00000073961 Clstn2Q9ER65 966 aa23.31■■□□□ 1.32
Ptpre-201ENSMUST00000073961 Setd5Q5XJV7 1441 aa23.3■■□□□ 1.32
Ptpre-201ENSMUST00000073961 Ccdc9Q8VC31 543 aaKnown RBP23.3■■□□□ 1.32
Ptpre-201ENSMUST00000073961 Ubl4bQ9CQ84 188 aa23.29■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms