RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ankrd36D3Z4K0 1415 aa13.11□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 A2mQ6GQT1 1474 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Trak1Q6PD31 939 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Card11Q8CIS0 1159 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Naip2Q9QUK4 1447 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Gm1043A0A140LJC2 1431 aa13.09□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 UacaQ8CGB3 1411 aa13.09□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Erich3F6QRE9 1637 aa13.09□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Crocc2F6XLV1 1638 aa13.08□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Usp47Q8BY87 1376 aa13.08□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Plekhh2Q8C115 1491 aa13.07□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Kdm5bQ80Y84 1544 aa13.07□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Rundc1Q0VDN7 615 aa13.07□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 DaxxO35613 739 aa13.06□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Rrp7aQ9D1C9 280 aaKnown RBP13.06□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Pabpn1Q8CCS6 302 aaKnown RBP13.05□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 AknaQ80VW7 1404 aa13.03□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 ArxO35085 564 aa13.03□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Lmo7E9PYF4 1699 aaKnown RBP13.02□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Gpatch8A2A6A1 1505 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 NexmifQ5DTT1 1515 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Kif21aQ9QXL2 1672 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Grin2aP35436 1464 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Map4P27546 1125 aaKnown RBP13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Gm13695A2AK44 830 aa13.01□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Slc4a2P13808 1237 aaKnown RBP13.01□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Tdrd9Q14BI7 1383 aa13□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Cwc22Q8C5N3 908 aaKnown RBP12.99□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Pla2r1Q62028 1487 aa12.99□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Cc2d2bA0A286YDU8 1405 aa12.98□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Apbb1Q9QXJ1 710 aa12.98□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Ift140E9PY46 1464 aa12.98□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Plppr3Q7TPB0 716 aa12.97□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Pak3Q61036 559 aa12.96□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 BC005561E9Q5E2 1589 aa12.96□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Polr3glQ8R0C0 218 aa12.96□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Nlrp6Q91WS2 869 aa12.96□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Arhgap31A6X8Z5 1425 aa12.95□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Kdm2aP59997 1161 aa12.95□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Clstn2Q9ER65 966 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Nup155Q99P88 1391 aaKnown RBP12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Abcc5Q9R1X5 1436 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 PxdnQ3UQ28 1475 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Naip5Q9R016 1403 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Mug1P28665 1476 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Ncoa2Q61026 1462 aa12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 WizO88286 1684 aaKnown RBP12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 B4galnt3Q6L8S8 986 aa12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Dbr1Q923B1 550 aa12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Dhx9O70133 1380 aaKnown RBP12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Rangap1P46061 589 aaKnown RBP12.92□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Kcnh8P59111 1102 aa12.92□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Disp1Q3TDN0 1521 aa12.91□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Lrriq1Q0P5X1 1673 aa12.91□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Ncoa3O09000 1398 aa12.91□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Magi3Q9EQJ9 1476 aa12.9□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Soga1E1U8D0 1418 aa12.9□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Ttll5Q8CHB8 1328 aa12.9□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Jph4Q80WT0 628 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Peg3Q3URU2 1571 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Mroh3A0A1D5RM54 893 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Neurod2Q62414 383 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Dhx57Q6P5D3 1388 aaKnown RBP12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Sart1Q9Z315 806 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Dapk1Q80YE7 1442 aa12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Upf2A2AT37 1269 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Tcerg1Q8CGF7 1100 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 CanxP35564 591 aaKnown RBP12.87□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Ifit1bl1D3Z6F0 470 aa12.87□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Ccdc27Q3V036 639 aa12.87□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Washc2Q6PGL7 1334 aa12.85□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Arid3cA6PWV5 409 aa12.85□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 ChgaP26339 463 aaKnown RBP12.84□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Zscan21Q07231 555 aa12.84□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Trim26Q99PN3 545 aa12.84□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 PnisrA2AJT4 805 aaKnown RBP12.83□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Lmtk2Q3TYD6 1471 aa12.83□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Hsp90aa1P07901 733 aaKnown RBP12.82□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Rpgrip1lQ8CG73 1264 aa12.82□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Arhgef40Q3UPH7 1517 aa12.81□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Ppp1r18Q8BQ30 594 aa12.81□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Mak16Q8BGS0 296 aaKnown RBP12.8□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Trim30dE9PWL0 497 aa12.8□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 CrbnQ8C7D2 445 aa12.8□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Stk24Q99KH8 431 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Il16O54824 1322 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Abca5Q8K448 1642 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Rprd2Q6NXI6 1469 aaKnown RBP12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Q7TT23 1179 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Fam163aQ8CAA5 168 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Ccdc141E9Q8Q6 1531 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Atp1b4Q99ME6 356 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Fgd6Q69ZL1 1399 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Ipo9Q91YE6 1041 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Rfx7F8VPJ6 1459 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Magi1Q6RHR9 1471 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Cnga1P29974 684 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 PrkcshO08795 521 aa12.77□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Neo1P97798 1493 aa12.77□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 L3mbtl2P59178 703 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms