RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Stag3O70576 1240 aa15.77■□□□□ 0.12
Shtn1-201ENSMUST00000047511 IqubQ8CDK3 788 aa15.77■□□□□ 0.11
Shtn1-201ENSMUST00000047511 NgefQ8CHT1 710 aa15.77■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Stk26Q99JT2 416 aa15.76■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Tdrd9Q14BI7 1383 aa15.76■□□□□ 0.11
Shtn1-201ENSMUST00000047511 MyclP10166 368 aa15.75■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Nup155Q99P88 1391 aaKnown RBP15.75■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Jph4Q80WT0 628 aa15.74■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Irx6Q9ER75 438 aa15.73■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Arap1Q4LDD4 1452 aa15.73■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Lamc3Q9R0B6 1581 aa15.72■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Plekhh2Q8C115 1491 aa15.72■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Camsap1A2AHC3 1581 aa15.72■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Grin2bQ01097 1482 aa15.72■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Naip1Q9QWK5 1403 aa15.71■□□□□ 0.11
Shtn1-201ENSMUST00000047511 Slc4a3P16283 1227 aa15.71■□□□□ 0.1
Shtn1-201ENSMUST00000047511 Usp47Q8BY87 1376 aa15.68■□□□□ 0.1
Shtn1-201ENSMUST00000047511 Upf2A2AT37 1269 aaKnown RBP15.68■□□□□ 0.1
Shtn1-201ENSMUST00000047511 NrkQ9R0G8 1455 aa15.67■□□□□ 0.1
Shtn1-201ENSMUST00000047511 PogzQ8BZH4 1409 aaKnown RBP15.67■□□□□ 0.1
Shtn1-201ENSMUST00000047511 Cc2d2bA0A286YDU8 1405 aa15.64■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Plb1Q3TTY0 1478 aa15.64■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Dhx57Q6P5D3 1388 aaKnown RBP15.63■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Fan1Q69ZT1 1020 aa15.63■□□□□ 0.09
Shtn1-201ENSMUST00000047511 TnnQ80Z71 1560 aa15.63■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Soga1E1U8D0 1418 aa15.63■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Gtf2e1Q9D0D5 440 aa15.63■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Mroh2bQ7M6Y6 1581 aa15.62■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Plin1Q8CGN5 517 aa15.62■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Srcin1Q9QWI6 1250 aa15.61■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Znf316Q6PGE4 1016 aa15.61■□□□□ 0.09
Shtn1-201ENSMUST00000047511 MlecQ6ZQI3 291 aaKnown RBP15.61■□□□□ 0.09
Shtn1-201ENSMUST00000047511 UacaQ8CGB3 1411 aa15.6■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Dbr1Q923B1 550 aa15.59■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Hsp90aa1P07901 733 aaKnown RBP15.59■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Dcaf11Q91VU6 549 aa15.59■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Slc4a1apE9PX68 744 aa15.59■□□□□ 0.09
Shtn1-201ENSMUST00000047511 Senp3Q9EP97 568 aaKnown RBP15.58■□□□□ 0.08
Shtn1-201ENSMUST00000047511 1700019A02RikA0A087WPV9 146 aa15.57■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Armcx1Q9CX83 456 aa15.56■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Spag9Q58A65 1321 aaKnown RBP15.56■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Gm6268A2A3U9 297 aa15.55■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Trim30dE9PWL0 497 aa15.55■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Arhgap31A6X8Z5 1425 aa15.54■□□□□ 0.08
Shtn1-201ENSMUST00000047511 AqrQ8CFQ3 1481 aaKnown RBP15.54■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Zscan21Q07231 555 aa15.54■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Gm7298A0A0N4SVU1 1476 aa15.54■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Irx3P81067 507 aa15.53■□□□□ 0.08
Shtn1-201ENSMUST00000047511 B4galnt3Q6L8S8 986 aa15.53■□□□□ 0.08
Shtn1-201ENSMUST00000047511 CadpsQ80TJ1 1355 aa15.53■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Ythdc1E9Q5K9 736 aaKnown RBP15.53■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Taok2Q6ZQ29 1240 aa15.53■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Arhgef5E9Q7D5 1581 aa15.52■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Speer4f1Q9D5Q6 258 aa15.52■□□□□ 0.08
Shtn1-201ENSMUST00000047511 Tmf1B9EKI3 1091 aa15.52■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Rock2P70336 1388 aa15.52■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Map3k1P53349 1493 aa15.51■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Pank3Q8R2W9 370 aa15.51■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Arid4bA2CG63 1314 aaKnown RBP15.51■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Mapk8ip3Q9ESN9 1337 aa15.51■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Inpp5dQ9ES52 1191 aa15.51■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Ncapd3Q6ZQK0 1506 aa15.5■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Txndc2Q6P902 515 aa15.5■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Fhad1A6PWD2 1420 aa15.5■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Pknox2Q8BG99 474 aa15.5■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Map3k5O35099 1380 aa15.5■□□□□ 0.07
Shtn1-201ENSMUST00000047511 CrbnQ8C7D2 445 aa15.49■□□□□ 0.07
Shtn1-201ENSMUST00000047511 EprsQ8CGC7 1512 aaKnown RBP15.49■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Fgd1P52734 960 aa15.49■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Birc3O08863 600 aa15.48■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Sox12Q04890 314 aa15.48■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Ccdc27Q3V036 639 aa15.48■□□□□ 0.07
Shtn1-201ENSMUST00000047511 U2af1Q9D883 239 aaKnown RBP15.47■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Cux1P53564 1515 aa15.46■□□□□ 0.07
Shtn1-201ENSMUST00000047511 Fgd6Q69ZL1 1399 aa15.45■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Dapk1Q80YE7 1442 aa15.45■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Psme1P97371 249 aa15.44■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Pde4cQ3UEI1 686 aa15.44■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Utp14aQ640M1 767 aaKnown RBP15.44■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Mak16Q8BGS0 296 aaKnown RBP15.44■□□□□ 0.06
Shtn1-201ENSMUST00000047511 CanxP35564 591 aaKnown RBP15.44■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Smg6P61406 1418 aaKnown RBP15.43■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Ttll5Q8CHB8 1328 aa15.43■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Thoc2B1AZI6 1594 aaKnown RBP15.43■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Unc13aQ4KUS2 1712 aa15.43■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Lmod3E9QA62 571 aa15.43■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Usp40Q8BWR4 1235 aa15.42■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Dhx9O70133 1380 aaKnown RBP15.42■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Ccdc9Q8VC31 543 aaKnown RBP15.41■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Tiam1Q60610 1591 aa15.4■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Eif4g1Q6NZJ6 1600 aaKnown RBP15.4■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Pcf11G3X9Z4 1553 aa15.39■□□□□ 0.06
Shtn1-201ENSMUST00000047511 Vps8Q0P5W1 1427 aa15.39■□□□□ 0.05
Shtn1-201ENSMUST00000047511 Tcerg1Q8CGF7 1100 aaKnown RBP15.39■□□□□ 0.05
Shtn1-201ENSMUST00000047511 Rwdd1Q9CQK7 243 aa15.39■□□□□ 0.05
Shtn1-201ENSMUST00000047511 Ift140E9PY46 1464 aa15.39■□□□□ 0.05
Shtn1-201ENSMUST00000047511 Golga2Q921M4 999 aa15.39■□□□□ 0.05
Shtn1-201ENSMUST00000047511 U2surpQ6NV83 1029 aaKnown RBP15.38■□□□□ 0.05
Shtn1-201ENSMUST00000047511 Ankrd26Q811D2 1581 aa15.38■□□□□ 0.05
Shtn1-201ENSMUST00000047511 Gtf3c3Q3TMP1 882 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms