RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Rhox8Q6VSS7 320 aa21.86■■□□□ 1.09
Shtn1-201ENSMUST00000047511 NischQ80TM9 1593 aa20.46■□□□□ 0.87
Shtn1-201ENSMUST00000047511 Ccdc136Q3TVA9 1136 aa19.84■□□□□ 0.77
Shtn1-201ENSMUST00000047511 Ehmt2Q9Z148 1263 aaKnown RBP19.64■□□□□ 0.74
Shtn1-201ENSMUST00000047511 Abcc9P70170 1546 aa19.59■□□□□ 0.73
Shtn1-201ENSMUST00000047511 Gm35339A0A140LHH9 1649 aa19.35■□□□□ 0.69
Shtn1-201ENSMUST00000047511 Abcc8B2RUS7 1588 aa19.27■□□□□ 0.67
Shtn1-201ENSMUST00000047511 Cngb1E1AZ71 1325 aa19.25■□□□□ 0.67
Shtn1-201ENSMUST00000047511 Esf1Q3V1V3 845 aaKnown RBP19.22■□□□□ 0.67
Shtn1-201ENSMUST00000047511 Gab3Q8BSM5 595 aa19.13■□□□□ 0.65
Shtn1-201ENSMUST00000047511 Trim41Q5NCC3 630 aa19.03■□□□□ 0.64
Shtn1-201ENSMUST00000047511 Rpgrip1Q9EPQ2 1331 aa18.83■□□□□ 0.61
Shtn1-201ENSMUST00000047511 Myt1lP97500 1187 aa18.66■□□□□ 0.58
Shtn1-201ENSMUST00000047511 Npm2Q80W85 207 aa18.6■□□□□ 0.57
Shtn1-201ENSMUST00000047511 Zeb1Q64318 1117 aa18.58■□□□□ 0.57
Shtn1-201ENSMUST00000047511 Zcchc6Q5BLK4 1491 aaKnown RBP18.53■□□□□ 0.56
Shtn1-201ENSMUST00000047511 Il27Q8K3I6 234 aa18.35■□□□□ 0.53
Shtn1-201ENSMUST00000047511 Las1lA2BE28 776 aaKnown RBP18.29■□□□□ 0.52
Shtn1-201ENSMUST00000047511 Wdr66E9Q743 1299 aa18.29■□□□□ 0.52
Shtn1-201ENSMUST00000047511 HrcG5E8J6 738 aa18.28■□□□□ 0.52
Shtn1-201ENSMUST00000047511 UbtfP25976 765 aaKnown RBP18.24■□□□□ 0.51
Shtn1-201ENSMUST00000047511 Ube2uB1AUC4 352 aa18.24■□□□□ 0.51
Shtn1-201ENSMUST00000047511 Ccdc180J3QNE4 1664 aa18.21■□□□□ 0.5
Shtn1-201ENSMUST00000047511 Acin1Q9JIX8 1338 aaKnown RBP18.13■□□□□ 0.49
Shtn1-201ENSMUST00000047511 Rtl1Q7M732 1744 aa18.04■□□□□ 0.48
Shtn1-201ENSMUST00000047511 Ap3b1Q9Z1T1 1105 aa17.93■□□□□ 0.46
Shtn1-201ENSMUST00000047511 Rb1cc1Q9ESK9 1588 aa17.92■□□□□ 0.46
Shtn1-201ENSMUST00000047511 Pcgf6Q99NA9 353 aa17.91■□□□□ 0.46
Shtn1-201ENSMUST00000047511 ScribQ80U72 1612 aa17.89■□□□□ 0.45
Shtn1-201ENSMUST00000047511 Chic1Q8CBW7 227 aa17.79■□□□□ 0.44
Shtn1-201ENSMUST00000047511 Kdm5dQ62240 1548 aa17.79■□□□□ 0.44
Shtn1-201ENSMUST00000047511 Ppargc1bQ8VHJ7 1014 aa17.73■□□□□ 0.43
Shtn1-201ENSMUST00000047511 NefmP08553 848 aa17.72■□□□□ 0.43
Shtn1-201ENSMUST00000047511 NacadQ5SWP3 1504 aa17.67■□□□□ 0.42
Shtn1-201ENSMUST00000047511 Fam50aQ9WV03 339 aaKnown RBP17.64■□□□□ 0.41
Shtn1-201ENSMUST00000047511 Dcaf1Q80TR8 1506 aa17.63■□□□□ 0.41
Shtn1-201ENSMUST00000047511 CenpbP27790 599 aa17.59■□□□□ 0.41
Shtn1-201ENSMUST00000047511 Baz1aO88379 1555 aa17.58■□□□□ 0.41
Shtn1-201ENSMUST00000047511 Plekhg3Q4VAC9 1341 aa17.57■□□□□ 0.4
Shtn1-201ENSMUST00000047511 Mier1Q5UAK0 511 aa17.55■□□□□ 0.4
Shtn1-201ENSMUST00000047511 Npm1Q61937 292 aaKnown RBP17.54■□□□□ 0.4
Shtn1-201ENSMUST00000047511 Brd4Q9ESU6 1400 aaKnown RBP17.52■□□□□ 0.39
Shtn1-201ENSMUST00000047511 Lmod2Q3UHZ5 550 aa17.52■□□□□ 0.39
Shtn1-201ENSMUST00000047511 Slc24a1Q91WD8 1130 aa17.45■□□□□ 0.38
Shtn1-201ENSMUST00000047511 Supt5hO55201 1082 aaKnown RBP17.44■□□□□ 0.38
Shtn1-201ENSMUST00000047511 DiexfQ8BTT6 772 aaKnown RBP17.44■□□□□ 0.38
Shtn1-201ENSMUST00000047511 Neurod1Q60867 357 aa17.42■□□□□ 0.38
Shtn1-201ENSMUST00000047511 Ubl4bQ9CQ84 188 aa17.35■□□□□ 0.37
Shtn1-201ENSMUST00000047511 Cep164Q5DU05 1446 aa17.33■□□□□ 0.36
Shtn1-201ENSMUST00000047511 Amer1Q7TS75 1132 aa17.32■□□□□ 0.36
Shtn1-201ENSMUST00000047511 NclP09405 707 aaKnown RBP17.28■□□□□ 0.36
Shtn1-201ENSMUST00000047511 Eid3Q3V124 375 aa17.27■□□□□ 0.35
Shtn1-201ENSMUST00000047511 Zbtb7cQ8VCZ7 619 aa17.24■□□□□ 0.35
Shtn1-201ENSMUST00000047511 Ttbk1Q6PCN3 1308 aa17.22■□□□□ 0.35
Shtn1-201ENSMUST00000047511 Sycp2Q9CUU3 1500 aa17.22■□□□□ 0.35
Shtn1-201ENSMUST00000047511 Myt1Q8CFC2 1127 aa17.21■□□□□ 0.35
Shtn1-201ENSMUST00000047511 TonslQ6NZL6 1363 aa17.2■□□□□ 0.34
Shtn1-201ENSMUST00000047511 Clip1Q922J3 1391 aa17.17■□□□□ 0.34
Shtn1-201ENSMUST00000047511 Ifnlr1Q8CGK5 535 aa17.15■□□□□ 0.34
Shtn1-201ENSMUST00000047511 Cdk11bP24788 784 aaKnown RBP17.14■□□□□ 0.33
Shtn1-201ENSMUST00000047511 Fkbp15Q6P9Q6 1216 aaKnown RBP17.13■□□□□ 0.33
Shtn1-201ENSMUST00000047511 Pelp1Q9DBD5 1123 aaKnown RBP17.12■□□□□ 0.33
Shtn1-201ENSMUST00000047511 Mapk8ip2Q9ERE9 830 aa17.11■□□□□ 0.33
Shtn1-201ENSMUST00000047511 Nop58Q6DFW4 536 aaKnown RBP17.1■□□□□ 0.33
Shtn1-201ENSMUST00000047511 Gm38655A0A286YDK6 273 aa17.09■□□□□ 0.33
Shtn1-201ENSMUST00000047511 Rsf1E9PWW9 1441 aaKnown RBP17.08■□□□□ 0.32
Shtn1-201ENSMUST00000047511 Cecr2E9Q2Z1 1453 aa17.06■□□□□ 0.32
Shtn1-201ENSMUST00000047511 Golga3P55937 1487 aa17.06■□□□□ 0.32
Shtn1-201ENSMUST00000047511 Smarca2Q6DIC0 1577 aa17.05■□□□□ 0.32
Shtn1-201ENSMUST00000047511 Crybg2B7ZCC2 1516 aa16.99■□□□□ 0.31
Shtn1-201ENSMUST00000047511 Csrnp3P59055 597 aa16.98■□□□□ 0.31
Shtn1-201ENSMUST00000047511 Kif15Q6P9L6 1387 aa16.98■□□□□ 0.31
Shtn1-201ENSMUST00000047511 Hnrnpul2Q00PI9 745 aaKnown RBP16.96■□□□□ 0.31
Shtn1-201ENSMUST00000047511 Sall2Q9QX96 1004 aa16.96■□□□□ 0.3
Shtn1-201ENSMUST00000047511 Zbtb4Q5F293 982 aa16.95■□□□□ 0.3
Shtn1-201ENSMUST00000047511 Os9Q8K2C7 672 aa16.92■□□□□ 0.3
Shtn1-201ENSMUST00000047511 Ccdc88bQ4QRL3 1481 aa16.92■□□□□ 0.3
Shtn1-201ENSMUST00000047511 Chic2Q9D9G3 165 aa16.91■□□□□ 0.3
Shtn1-201ENSMUST00000047511 Ercc6F8VPZ5 1481 aa16.89■□□□□ 0.29
Shtn1-201ENSMUST00000047511 Stra8P70278 393 aa16.88■□□□□ 0.29
Shtn1-201ENSMUST00000047511 Eif5bQ05D44 1216 aaKnown RBP16.88■□□□□ 0.29
Shtn1-201ENSMUST00000047511 Pds5bQ4VA53 1446 aaKnown RBP16.85■□□□□ 0.29
Shtn1-201ENSMUST00000047511 BlmO88700 1416 aa16.84■□□□□ 0.29
Shtn1-201ENSMUST00000047511 Setd5Q5XJV7 1441 aa16.83■□□□□ 0.28
Shtn1-201ENSMUST00000047511 NrdcQ8BHG1 1161 aa16.83■□□□□ 0.28
Shtn1-201ENSMUST00000047511 1700123L14RikQ3V2K7 440 aa16.81■□□□□ 0.28
Shtn1-201ENSMUST00000047511 ClspnQ80YR7 1315 aa16.79■□□□□ 0.28
Shtn1-201ENSMUST00000047511 Synj1Q8CHC4 1574 aa16.76■□□□□ 0.27
Shtn1-201ENSMUST00000047511 BicraF8VPZ9 1578 aa16.73■□□□□ 0.27
Shtn1-201ENSMUST00000047511 Erich6D3Z6S9 713 aa16.73■□□□□ 0.27
Shtn1-201ENSMUST00000047511 CftrP26361 1476 aa16.73■□□□□ 0.27
Shtn1-201ENSMUST00000047511 Aebp2Q9Z248 504 aaKnown RBP16.69■□□□□ 0.26
Shtn1-201ENSMUST00000047511 Prdm10Q3UTQ7 1184 aa16.67■□□□□ 0.26
Shtn1-201ENSMUST00000047511 Anp32bQ9EST5 272 aaKnown RBP16.64■□□□□ 0.25
Shtn1-201ENSMUST00000047511 Plppr3Q7TPB0 716 aa16.63■□□□□ 0.25
Shtn1-201ENSMUST00000047511 Ccdc18Q640L5 1455 aa16.58■□□□□ 0.25
Shtn1-201ENSMUST00000047511 Bcl11aQ9QYE3 773 aa16.57■□□□□ 0.24
Shtn1-201ENSMUST00000047511 Eea1Q8BL66 1411 aa16.57■□□□□ 0.24
Shtn1-201ENSMUST00000047511 Arhgap27A2AB59 869 aa16.56■□□□□ 0.24
Shtn1-201ENSMUST00000047511 Atad2bE9Q166 1460 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 182.2 ms