RNA–Protein interactions for RNA: ENSMUST00000041418.12

Stag1-201, Transcript of Cohesin subunit SA-1, mousemouse

TSL 5 BASIC

Gene Stag1, Length 5,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-201ENSMUST00000041418 Rundc1Q0VDN7 615 aa11.58□□□□□ -0.56
Stag1-201ENSMUST00000041418 Ap3b2Q9JME5 1082 aa11.58□□□□□ -0.56
Stag1-201ENSMUST00000041418 Rtn4Q99P72 1162 aaKnown RBP11.58□□□□□ -0.56
Stag1-201ENSMUST00000041418 Srcin1Q9QWI6 1250 aa11.57□□□□□ -0.56
Stag1-201ENSMUST00000041418 1700019A02RikA0A087WPV9 146 aa11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 Neurod2Q62414 383 aa11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 Sart3Q9JLI8 962 aaKnown RBP11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 CenpjQ569L8 1344 aa11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 UacaQ8CGB3 1411 aa11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 Mbd3Q9Z2D8 285 aaKnown RBP11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 Ncoa2Q61026 1462 aa11.56□□□□□ -0.56
Stag1-201ENSMUST00000041418 Trim30dE9PWL0 497 aa11.55□□□□□ -0.56
Stag1-201ENSMUST00000041418 Nol10Q5RJG1 687 aaKnown RBP11.55□□□□□ -0.56
Stag1-201ENSMUST00000041418 Pes1Q9EQ61 584 aaKnown RBP11.55□□□□□ -0.56
Stag1-201ENSMUST00000041418 Hspa5P20029 655 aaKnown RBP11.54□□□□□ -0.56
Stag1-201ENSMUST00000041418 Utp14aQ640M1 767 aaKnown RBP11.54□□□□□ -0.56
Stag1-201ENSMUST00000041418 Smarca2Q6DIC0 1577 aa11.54□□□□□ -0.56
Stag1-201ENSMUST00000041418 Spag9Q58A65 1321 aaKnown RBP11.54□□□□□ -0.56
Stag1-201ENSMUST00000041418 Ccnb3Q810T2 1396 aa11.54□□□□□ -0.56
Stag1-201ENSMUST00000041418 Efcab5A0JP43 1406 aa11.54□□□□□ -0.56
Stag1-201ENSMUST00000041418 Dnai2A2AC93 623 aa11.53□□□□□ -0.56
Stag1-201ENSMUST00000041418 Hsp90ab1P11499 724 aaKnown RBP11.52□□□□□ -0.57
Stag1-201ENSMUST00000041418 ScribQ80U72 1612 aa11.52□□□□□ -0.57
Stag1-201ENSMUST00000041418 Rock2P70336 1388 aa11.51□□□□□ -0.57
Stag1-201ENSMUST00000041418 PnnO35691 725 aaKnown RBP11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 Birc3O08863 600 aa11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 Sox12Q04890 314 aa11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 Cttnbp2B9EJA2 1648 aa11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 Q3TQI7 289 aaKnown RBP11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 KnstrnQ9D9Z1 312 aaKnown RBP11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 U2af1Q9D883 239 aaKnown RBP11.5□□□□□ -0.57
Stag1-201ENSMUST00000041418 Rab11fip3Q8CHD8 1047 aa11.49□□□□□ -0.57
Stag1-201ENSMUST00000041418 Rwdd1Q9CQK7 243 aa11.49□□□□□ -0.57
Stag1-201ENSMUST00000041418 Prdm16A2A935 1275 aa11.48□□□□□ -0.57
Stag1-201ENSMUST00000041418 Iqgap2Q3UQ44 1575 aa11.48□□□□□ -0.57
Stag1-201ENSMUST00000041418 Synj1Q8CHC4 1574 aa11.48□□□□□ -0.57
Stag1-201ENSMUST00000041418 Zscan21Q07231 555 aa11.47□□□□□ -0.57
Stag1-201ENSMUST00000041418 DekQ7TNV0 380 aaKnown RBP11.47□□□□□ -0.57
Stag1-201ENSMUST00000041418 MccE9PWI3 1003 aa11.47□□□□□ -0.57
Stag1-201ENSMUST00000041418 Nsd2Q8BVE8 1365 aa11.46□□□□□ -0.57
Stag1-201ENSMUST00000041418 Dcaf11Q91VU6 549 aa11.46□□□□□ -0.57
Stag1-201ENSMUST00000041418 Hsp90b1P08113 802 aaKnown RBP11.46□□□□□ -0.57
Stag1-201ENSMUST00000041418 Fgd6Q69ZL1 1399 aa11.46□□□□□ -0.57
Stag1-201ENSMUST00000041418 Ythdc1E9Q5K9 736 aaKnown RBP11.46□□□□□ -0.58
Stag1-201ENSMUST00000041418 Q8BT18 775 aa11.45□□□□□ -0.58
Stag1-201ENSMUST00000041418 Apbb1Q9QXJ1 710 aa11.45□□□□□ -0.58
Stag1-201ENSMUST00000041418 U2surpQ6NV83 1029 aaKnown RBP11.44□□□□□ -0.58
Stag1-201ENSMUST00000041418 Ppm1gQ61074 542 aa11.44□□□□□ -0.58
Stag1-201ENSMUST00000041418 Fan1Q69ZT1 1020 aa11.44□□□□□ -0.58
Stag1-201ENSMUST00000041418 CanxP35564 591 aaKnown RBP11.44□□□□□ -0.58
Stag1-201ENSMUST00000041418 Htatsf1Q8BGC0 757 aa11.43□□□□□ -0.58
Stag1-201ENSMUST00000041418 Golga2Q921M4 999 aa11.43□□□□□ -0.58
Stag1-201ENSMUST00000041418 Cc2d2bA0A286YDU8 1405 aa11.42□□□□□ -0.58
Stag1-201ENSMUST00000041418 Pak3Q61036 559 aa11.42□□□□□ -0.58
Stag1-201ENSMUST00000041418 Speer4f1Q9D5Q6 258 aa11.42□□□□□ -0.58
Stag1-201ENSMUST00000041418 Znf316Q6PGE4 1016 aa11.42□□□□□ -0.58
Stag1-201ENSMUST00000041418 Urb2E9Q7L1 1524 aaKnown RBP11.42□□□□□ -0.58
Stag1-201ENSMUST00000041418 Mak16Q8BGS0 296 aaKnown RBP11.42□□□□□ -0.58
Stag1-201ENSMUST00000041418 Sh3bp5Q9Z131 463 aa11.41□□□□□ -0.58
Stag1-201ENSMUST00000041418 Shq1Q7TMX5 569 aa11.41□□□□□ -0.58
Stag1-201ENSMUST00000041418 Rapgef2Q8CHG7 1496 aa11.4□□□□□ -0.58
Stag1-201ENSMUST00000041418 Ccdc9Q8VC31 543 aaKnown RBP11.4□□□□□ -0.58
Stag1-201ENSMUST00000041418 Polr1aO35134 1717 aaKnown RBP11.4□□□□□ -0.58
Stag1-201ENSMUST00000041418 Cabp4Q8VHC5 271 aa11.4□□□□□ -0.58
Stag1-201ENSMUST00000041418 Stk31Q99MW1 1018 aa11.4□□□□□ -0.58
Stag1-201ENSMUST00000041418 PtmsQ9D0J8 101 aaKnown RBP11.4□□□□□ -0.59
Stag1-201ENSMUST00000041418 Aebp2Q9Z248 504 aaKnown RBP11.4□□□□□ -0.59
Stag1-201ENSMUST00000041418 Mrc2Q64449 1479 aa11.39□□□□□ -0.59
Stag1-201ENSMUST00000041418 Tdrd9Q14BI7 1383 aa11.39□□□□□ -0.59
Stag1-201ENSMUST00000041418 CadpsQ80TJ1 1355 aa11.39□□□□□ -0.59
Stag1-201ENSMUST00000041418 ErbinQ80TH2 1402 aa11.39□□□□□ -0.59
Stag1-201ENSMUST00000041418 Wwc2Q6NXJ0 1187 aa11.39□□□□□ -0.59
Stag1-201ENSMUST00000041418 Shroom4Q1W617 1475 aa11.37□□□□□ -0.59
Stag1-201ENSMUST00000041418 Atf3Q60765 181 aa11.37□□□□□ -0.59
Stag1-201ENSMUST00000041418 Smc4Q8CG47 1286 aa11.37□□□□□ -0.59
Stag1-201ENSMUST00000041418 Plin1Q8CGN5 517 aa11.37□□□□□ -0.59
Stag1-201ENSMUST00000041418 Slc4a1apE9PX68 744 aa11.36□□□□□ -0.59
Stag1-201ENSMUST00000041418 Trim44Q9QXA7 346 aa11.36□□□□□ -0.59
Stag1-201ENSMUST00000041418 Fyb1O35601 819 aa11.36□□□□□ -0.59
Stag1-201ENSMUST00000041418 Rassf8Q8CJ96 419 aa11.35□□□□□ -0.59
Stag1-201ENSMUST00000041418 Tmco5bQ80X59 307 aa11.35□□□□□ -0.59
Stag1-201ENSMUST00000041418 Ccar1Q8CH18 1146 aaKnown RBP11.35□□□□□ -0.59
Stag1-201ENSMUST00000041418 Bcl11bQ99PV8 884 aa11.35□□□□□ -0.59
Stag1-201ENSMUST00000041418 Clstn1Q9EPL2 979 aa11.35□□□□□ -0.59
Stag1-201ENSMUST00000041418 Usp40Q8BWR4 1235 aa11.34□□□□□ -0.59
Stag1-201ENSMUST00000041418 Arhgap31A6X8Z5 1425 aa11.34□□□□□ -0.59
Stag1-201ENSMUST00000041418 Casc1Q6TDU8 730 aa11.34□□□□□ -0.59
Stag1-201ENSMUST00000041418 Ppm1fQ8CGA0 452 aa11.33□□□□□ -0.6
Stag1-201ENSMUST00000041418 Chmp7Q8R1T1 451 aa11.33□□□□□ -0.6
Stag1-201ENSMUST00000041418 Ciz1Q8VEH2 845 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 CatipB9EKE5 520 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 MecomP14404 1042 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 FanciQ8K368 1330 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 Tnnt1O88346 262 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 Sirt1Q923E4 737 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 Chmp3Q9CQ10 224 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 Gm14025A2AP89 1413 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 Ift140E9PY46 1464 aa11.32□□□□□ -0.6
Stag1-201ENSMUST00000041418 PtmaP26350 111 aa11.31□□□□□ -0.6
Stag1-201ENSMUST00000041418 Top2aQ01320 1528 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms