RNA–Protein interactions for RNA: ENSMUST00000208589.1

Smarca2-238, Transcript of Probable global transcription activator SNF2L2, mouse

TSL 5 BASIC

Gene Smarca2, Length 1,054 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Smarca2-238	ENSMUST00000208589	Vps13b	Q80TY5	3993 aa		4.39	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Chtf8	P0CG14	533 aa		4.39	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Mt3	P28184	68 aa		4.39	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Lrp1b	Q9JI18	4599 aa		4.38	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Pkhd1l1	Q80ZA4	4249 aa		4.37	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Phxr4	P15974	95 aa		4.37	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Gm10643	Q3URG9	111 aa		4.37	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Sox16	Q62247	57 aa		4.37	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Gm10160	F6Y577	67 aa		4.36	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Fat3	Q8BNA6	4555 aa		4.35	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Anapc11	Q9CPX9	84 aa		4.35	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Dnhd1	D3Z2X2	4750 aa		4.35	□□□□□ -1.71
Smarca2-238	ENSMUST00000208589	Gm10267	M0QWD8	85 aa		4.33	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Hectd4	E9Q2E4	4418 aa		4.32	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	A930033H14Rik	G5E8X6	103 aa		4.32	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Lce1a2	Q9D1K4	149 aa		4.32	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Lce1i	Q9D6P5	149 aa		4.32	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Abca13	Q5SSE9	5034 aa		4.32	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Fat2	Q5F226	4351 aa		4.31	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Gm10153	A0A1B0GRL1	320 aa		4.31	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Krtap4-8	B1AQA8	209 aa		4.31	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Mycbp2	Q7TPH6	4711 aa		4.3	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Cypt15	B1AXS0	87 aa		4.3	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Rps29	P62274	56 aa		4.3	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Krtap15-1	Q9QZU5	150 aa		4.3	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Lrp1	Q91ZX7	4545 aa	Known RBP	4.29	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Spaca4	Q80ZQ0	127 aa		4.29	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	4933415A04Rik	Q9D443	101 aa		4.29	□□□□□ -1.72
Smarca2-238	ENSMUST00000208589	Hydin	Q80W93	5154 aa		4.25	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Fam229a	B2KGE5	128 aa		4.25	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Defb13	Q8R2I4	64 aa		4.25	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Pclo	Q9QYX7	5068 aa		4.24	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Ndufb1	P0DN34	57 aa		4.24	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Gm20661	K7N787	53 aa		4.23	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Prm1	P02319	51 aa		4.23	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Limd2	Q8BGB5	128 aa		4.23	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Gm21798	J3QNU5	87 aa		4.22	□□□□□ -1.73
Smarca2-238	ENSMUST00000208589	Uqcr11	Q9CPX8	56 aa		4.21	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Lrp2	A2ARV4	4660 aa		4.2	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Gm5767	A0A0J9YTU8	78 aa		4.2	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Herc1	E9PZP8	4859 aa		4.2	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	9230102O04Rik	A2ASX7	82 aa		4.19	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Defb38	Q7TNV7	63 aa		4.18	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Gm9821	Q8K076	103 aa		4.18	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Gm7735	D3YX18	52 aa		4.17	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	Gm5965	D3Z724	196 aa		4.16	□□□□□ -1.74
Smarca2-238	ENSMUST00000208589	2310079G19Rik	Q9D6L6	185 aa		4.14	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	Gm9789	Q8BIG3	52 aa		4.13	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	Sptssb	Q925E8	76 aa		4.13	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	Gm26620	Q9CY65	116 aa		4.13	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	2310034C09Rik	Q9D746	214 aa		4.12	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	Gm10999	F6Q4M4	69 aa		4.11	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	Sec61b	Q9CQS8	96 aa	Known RBP	4.11	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589		Q8BGJ3	129 aa		4.1	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	4930507D05Rik	Q8C9C9	103 aa		4.1	□□□□□ -1.75
Smarca2-238	ENSMUST00000208589	Gm3646	F6S692	53 aa		4.08	□□□□□ -1.76
Smarca2-238	ENSMUST00000208589	Sec61g	P60060	68 aa		4.07	□□□□□ -1.76
Smarca2-238	ENSMUST00000208589	Krtap5-4	Q62220	223 aa		4.04	□□□□□ -1.76
Smarca2-238	ENSMUST00000208589	Gm4491	E0CX42	125 aa		4.03	□□□□□ -1.76
Smarca2-238	ENSMUST00000208589	1700042G07Rik	B1AUF7	90 aa		4.02	□□□□□ -1.77
Smarca2-238	ENSMUST00000208589	Krtap4-13	Q9D7P3	165 aa		4.01	□□□□□ -1.77
Smarca2-238	ENSMUST00000208589	Rpl37	Q9D823	97 aa		4	□□□□□ -1.77
Smarca2-238	ENSMUST00000208589	Ush2A	Q2QI47	5193 aa		3.98	□□□□□ -1.77
Smarca2-238	ENSMUST00000208589	4932415D10Rik	A0A1W2P6U8	4986 aa		3.96	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Defb1	P56386	69 aa		3.95	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	2310057N15Rik	Q9D6T8	200 aa		3.95	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Gm45337	A0A1B0GS71	263 aa		3.94	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Rnase13	Q5GAM7	153 aa		3.94	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Cox6b2	Q80ZN9	88 aa		3.94	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Pla2g10	Q9QXX3	151 aa		3.94	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Ndufs5	Q99LY9	106 aa		3.92	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Hmcn2	A2AJ76	5100 aa		3.91	□□□□□ -1.78
Smarca2-238	ENSMUST00000208589	Ubr4	A2AN08	5180 aa		3.89	□□□□□ -1.79
Smarca2-238	ENSMUST00000208589	Krtap9-3	Q3V2C1	136 aa		3.88	□□□□□ -1.79
Smarca2-238	ENSMUST00000208589	Krtap1-3	A2A588	173 aa		3.87	□□□□□ -1.79
Smarca2-238	ENSMUST00000208589	Gm17416	Q30KP4	66 aa		3.85	□□□□□ -1.79
Smarca2-238	ENSMUST00000208589	Gm20537	G3UYK7	97 aa		3.82	□□□□□ -1.8
Smarca2-238	ENSMUST00000208589	Crct1	Q6PAI5	102 aa		3.81	□□□□□ -1.8
Smarca2-238	ENSMUST00000208589	Gm9955	Q8CEJ8	102 aa		3.81	□□□□□ -1.8
Smarca2-238	ENSMUST00000208589	Gm17606	F6ZL36	78 aa		3.77	□□□□□ -1.81
Smarca2-238	ENSMUST00000208589	Krtap16-3	Q8C1I6	86 aa		3.74	□□□□□ -1.81
Smarca2-238	ENSMUST00000208589	Zan	O88799	5376 aa		3.74	□□□□□ -1.81
Smarca2-238	ENSMUST00000208589	Gm10382	Q3V0T5	144 aa		3.73	□□□□□ -1.81
Smarca2-238	ENSMUST00000208589	Krtap19-1	Q925H2	87 aa		3.73	□□□□□ -1.81
Smarca2-238	ENSMUST00000208589	Krtap19-3	Q925H6	87 aa		3.73	□□□□□ -1.81
Smarca2-238	ENSMUST00000208589	Gm3880	A0A1B0GSB3	72 aa		3.7	□□□□□ -1.82
Smarca2-238	ENSMUST00000208589	Krtap1-4	Q3V2D6	188 aa		3.7	□□□□□ -1.82
Smarca2-238	ENSMUST00000208589	Fat4	Q2PZL6	4981 aa		3.69	□□□□□ -1.82
Smarca2-238	ENSMUST00000208589	Gm11568	A2A4M2	211 aa		3.68	□□□□□ -1.82
Smarca2-238	ENSMUST00000208589	Gm10061	D3Z714	54 aa		3.67	□□□□□ -1.82
Smarca2-238	ENSMUST00000208589	Gm10318	A0A1W2P728	225 aa		3.66	□□□□□ -1.82
Smarca2-238	ENSMUST00000208589	Krtap13-1	Q8K198	168 aa		3.63	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Romo1	P60603	79 aa		3.62	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Krtap9-1	Q64526	186 aa		3.62	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Gm12216	A0A1W2P827	62 aa		3.61	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Gm11562	A0PK51	136 aa		3.61	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Gm11596	B1AQB0	205 aa		3.61	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Rnf213	E9Q555	5152 aa	Known RBP	3.59	□□□□□ -1.83
Smarca2-238	ENSMUST00000208589	Gm17402	F6Z0L5	76 aa		3.58	□□□□□ -1.84
Smarca2-238	ENSMUST00000208589	BC029722	A0A0N4SW31	51 aa		3.57	□□□□□ -1.84

Retrieved 100 of 22,080 RNA–protein pairs in 150.8 ms