RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Mrpl34Q99N91 92 aa4.13□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Fam229aB2KGE5 128 aa4.12□□□□□ -1.75
Scn8a-202ENSMUST00000096198 C130032M10RikQ8C888 123 aa4.12□□□□□ -1.75
Scn8a-202ENSMUST00000096198 UqcrqQ9CQ69 82 aa4.12□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Dph3Q8K0W9 82 aa4.1□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Lyrm7Q9DA03 104 aa4.1□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Ubl5Q9EPV8 73 aa4.09□□□□□ -1.75
Scn8a-202ENSMUST00000096198 Fam240bJ3QMB3 78 aa4.08□□□□□ -1.76
Scn8a-202ENSMUST00000096198 MplkipQ9D011 178 aa4.08□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Reg3aO09037 175 aa4.06□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Gm45213A0A0U1RNZ6 101 aa4.05□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Gm11554B1AQB2 190 aa4.05□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Muc19Q6PZE0 7524 aa4.04□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Tmem254aP0DN89 123 aa4.04□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Tmem254bP0DN90 123 aa4.04□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Tmem254cP0DN91 123 aa4.04□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Cypt15B1AXS0 87 aa4.03□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Defa21Q8C1P2 93 aa4.03□□□□□ -1.76
Scn8a-202ENSMUST00000096198 Igkv8-19A0A0G2JFN8 121 aa4.02□□□□□ -1.77
Scn8a-202ENSMUST00000096198 Trav3-1Q5R1I8 114 aa4.02□□□□□ -1.77
Scn8a-202ENSMUST00000096198 Igkv3-3A0A140T8Q0 119 aa4□□□□□ -1.77
Scn8a-202ENSMUST00000096198 Prr15lQ8JZM2 100 aa3.98□□□□□ -1.77
Scn8a-202ENSMUST00000096198 BatfO35284 125 aa3.97□□□□□ -1.77
Scn8a-202ENSMUST00000096198 Hist1h4aP62806 103 aaKnown RBP3.96□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Gm26620Q9CY65 116 aa3.96□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Pla2g10Q9QXX3 151 aa3.96□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Rpl37Q9D823 97 aa3.95□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Lce1cQ9D1C5 147 aa3.93□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Lce1fB9EJP6 147 aa3.92□□□□□ -1.78
Scn8a-202ENSMUST00000096198 BikO70337 150 aa3.92□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Fam229bQ8CF36 80 aa3.92□□□□□ -1.78
Scn8a-202ENSMUST00000096198 A0A286YE49 62 aa3.91□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Gm10267M0QWD8 85 aa3.91□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Atp5eP56382 52 aa3.91□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Defb13Q8R2I4 64 aa3.91□□□□□ -1.78
Scn8a-202ENSMUST00000096198 Spink8Q09TK9 105 aa3.9□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Ndufc1Q9CQY9 76 aa3.9□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Samd13D3YUG0 102 aa3.89□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Krtap8-1O08633 61 aa3.87□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Scgb1b2O35176 93 aa3.87□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Krtap12-1Q9Z287 130 aa3.87□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Naa38Q9D2U5 125 aa3.86□□□□□ -1.79
Scn8a-202ENSMUST00000096198 1700074P13RikQ9D9G7 251 aa3.85□□□□□ -1.79
Scn8a-202ENSMUST00000096198 Kmt2dQ6PDK2 5588 aa3.84□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Krtap1-5A2A590 122 aa3.83□□□□□ -1.8
Scn8a-202ENSMUST00000096198 7530416G11RikJ3QJX6 159 aa3.82□□□□□ -1.8
Scn8a-202ENSMUST00000096198 4930518I15RikQ3V2W7 57 aa3.82□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Anapc13Q8R034 74 aa3.82□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Chtf8P0CG14 533 aa3.81□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Gm2431E9Q8S1 172 aa3.79□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Mt2P02798 61 aa3.79□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Serp2Q6TAW2 65 aa3.79□□□□□ -1.8
Scn8a-202ENSMUST00000096198 Lce1iQ9D6P5 149 aa3.77□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Gm4491E0CX42 125 aa3.76□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Rnase13Q5GAM7 153 aa3.76□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Atox1O08997 68 aaKnown RBP3.75□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Apoc4Q61268 124 aa3.75□□□□□ -1.81
Scn8a-202ENSMUST00000096198 DstQ91ZU6 7393 aaKnown RBP3.75□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Krtap13-1Q8K198 168 aa3.74□□□□□ -1.81
Scn8a-202ENSMUST00000096198 9230102O04RikA2ASX7 82 aa3.73□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Sox16Q62247 57 aa3.73□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Coa6Q8BGD8 79 aa3.73□□□□□ -1.81
Scn8a-202ENSMUST00000096198 B230307C23RikQ8BLB2 64 aa3.73□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Gm11567Q9D141 195 aa3.73□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Spint4Q9D263 159 aa3.73□□□□□ -1.81
Scn8a-202ENSMUST00000096198 NebE9Q1W3 7152 aa3.72□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Gm28539A0A087WSL9 92 aa3.72□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Gm10999F6Q4M4 69 aa3.72□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Q8BGJ3 129 aa3.72□□□□□ -1.81
Scn8a-202ENSMUST00000096198 Gm17416Q30KP4 66 aa3.7□□□□□ -1.82
Scn8a-202ENSMUST00000096198 Defb38Q7TNV7 63 aa3.7□□□□□ -1.82
Scn8a-202ENSMUST00000096198 Gm21798J3QNU5 87 aa3.69□□□□□ -1.82
Scn8a-202ENSMUST00000096198 Gm10160F6Y577 67 aa3.68□□□□□ -1.82
Scn8a-202ENSMUST00000096198 Lce1a2Q9D1K4 149 aa3.68□□□□□ -1.82
Scn8a-202ENSMUST00000096198 2310079G19RikQ9D6L6 185 aa3.68□□□□□ -1.82
Scn8a-202ENSMUST00000096198 Krtap5-2Q9D5Z7 189 aa3.67□□□□□ -1.82
Scn8a-202ENSMUST00000096198 Gm10142J3KMP7 120 aa3.65□□□□□ -1.83
Scn8a-202ENSMUST00000096198 4930507D05RikQ8C9C9 103 aa3.65□□□□□ -1.83
Scn8a-202ENSMUST00000096198 Gm10643Q3URG9 111 aa3.64□□□□□ -1.83
Scn8a-202ENSMUST00000096198 Coa5Q99M07 74 aa3.63□□□□□ -1.83
Scn8a-202ENSMUST00000096198 Gm4553A0A1B0GSA9 284 aa3.62□□□□□ -1.83
Scn8a-202ENSMUST00000096198 Krtap22-2J3QNX6 67 aa3.59□□□□□ -1.83
Scn8a-202ENSMUST00000096198 Gm39115A0A1B0GSH7 232 aa3.58□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Smlr1J3QMJ4 66 aa3.58□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Krtap19-9aF8WH65 55 aa3.57□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Tmem258P61166 79 aa3.57□□□□□ -1.84
Scn8a-202ENSMUST00000096198 SnurfQ9WU12 71 aa3.55□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Defb1P56386 69 aa3.54□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Krtap4-16Q91W93 202 aa3.54□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Gm45618A0A1B0GSA0 219 aa3.53□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Gm19935A0A1B0GSF9 52 aa3.53□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Pet100P0DJE0 76 aa3.53□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Hmcn1D3YXG0 5634 aa3.53□□□□□ -1.84
Scn8a-202ENSMUST00000096198 Cox6b2Q80ZN9 88 aa3.52□□□□□ -1.85
Scn8a-202ENSMUST00000096198 Gm29735A0A1B0GT06 219 aa3.51□□□□□ -1.85
Scn8a-202ENSMUST00000096198 Cdc42se1Q8BHL7 80 aa3.51□□□□□ -1.85
Scn8a-202ENSMUST00000096198 SptssbQ925E8 76 aa3.49□□□□□ -1.85
Scn8a-202ENSMUST00000096198 Smim20D3Z7Q2 69 aa3.47□□□□□ -1.85
Scn8a-202ENSMUST00000096198 Gm20661K7N787 53 aa3.47□□□□□ -1.85
Scn8a-202ENSMUST00000096198 Sprr2iO70560 76 aa3.47□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 666.4 ms