RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Abcc9P70170 1546 aa20.9■□□□□ 0.94
Scn8a-202ENSMUST00000096198 Gm35339A0A140LHH9 1649 aa20.71■□□□□ 0.91
Scn8a-202ENSMUST00000096198 Dnajc5bQ9CQ94 199 aa20.35■□□□□ 0.85
Scn8a-202ENSMUST00000096198 NischQ80TM9 1593 aa19.96■□□□□ 0.79
Scn8a-202ENSMUST00000096198 ScribQ80U72 1612 aa19.88■□□□□ 0.77
Scn8a-202ENSMUST00000096198 Abcc8B2RUS7 1588 aa19.67■□□□□ 0.74
Scn8a-202ENSMUST00000096198 Dnajc5P60904 198 aa19.42■□□□□ 0.7
Scn8a-202ENSMUST00000096198 NacadQ5SWP3 1504 aa18.84■□□□□ 0.61
Scn8a-202ENSMUST00000096198 Kdm5dQ62240 1548 aa18.84■□□□□ 0.61
Scn8a-202ENSMUST00000096198 Trim41Q5NCC3 630 aa18.75■□□□□ 0.59
Scn8a-202ENSMUST00000096198 BicraF8VPZ9 1578 aa18.71■□□□□ 0.59
Scn8a-202ENSMUST00000096198 Thoc2B1AZI6 1594 aaKnown RBP18.68■□□□□ 0.58
Scn8a-202ENSMUST00000096198 Sycp2Q9CUU3 1500 aa18.6■□□□□ 0.57
Scn8a-202ENSMUST00000096198 Cc2d2aQ8CFW7 1633 aa18.4■□□□□ 0.54
Scn8a-202ENSMUST00000096198 Pds5bQ4VA53 1446 aaKnown RBP18.19■□□□□ 0.5
Scn8a-202ENSMUST00000096198 Mapk8ip2Q9ERE9 830 aa18.06■□□□□ 0.48
Scn8a-202ENSMUST00000096198 Chic1Q8CBW7 227 aa18.05■□□□□ 0.48
Scn8a-202ENSMUST00000096198 Fam135aQ6NS59 1506 aa17.93■□□□□ 0.46
Scn8a-202ENSMUST00000096198 Ercc6F8VPZ5 1481 aa17.82■□□□□ 0.44
Scn8a-202ENSMUST00000096198 Atad2bE9Q166 1460 aaKnown RBP17.79■□□□□ 0.44
Scn8a-202ENSMUST00000096198 Dcaf1Q80TR8 1506 aa17.75■□□□□ 0.43
Scn8a-202ENSMUST00000096198 Col17a1Q07563 1470 aa17.61■□□□□ 0.41
Scn8a-202ENSMUST00000096198 Pcdh10E9PXQ7 1057 aa17.54■□□□□ 0.4
Scn8a-202ENSMUST00000096198 Smarca2Q6DIC0 1577 aa17.52■□□□□ 0.39
Scn8a-202ENSMUST00000096198 Mrc2Q64449 1479 aa17.51■□□□□ 0.39
Scn8a-202ENSMUST00000096198 Ubl4bQ9CQ84 188 aa17.5■□□□□ 0.39
Scn8a-202ENSMUST00000096198 Phldb1Q6PDH0 1371 aaKnown RBP17.47■□□□□ 0.39
Scn8a-202ENSMUST00000096198 Shroom2A2ALU4 1481 aa17.45■□□□□ 0.38
Scn8a-202ENSMUST00000096198 Frmpd1A2AKB4 1549 aa17.41■□□□□ 0.38
Scn8a-202ENSMUST00000096198 Wdr62Q3U3T8 1523 aa17.37■□□□□ 0.37
Scn8a-202ENSMUST00000096198 Rb1cc1Q9ESK9 1588 aa17.36■□□□□ 0.37
Scn8a-202ENSMUST00000096198 Lrriq1Q0P5X1 1673 aa17.36■□□□□ 0.37
Scn8a-202ENSMUST00000096198 Iqgap2Q3UQ44 1575 aa17.35■□□□□ 0.37
Scn8a-202ENSMUST00000096198 Baz1bQ9Z277 1479 aa17.28■□□□□ 0.36
Scn8a-202ENSMUST00000096198 Unc13aQ4KUS2 1712 aa17.24■□□□□ 0.35
Scn8a-202ENSMUST00000096198 Cypt1Q8CH20 168 aa17.23■□□□□ 0.35
Scn8a-202ENSMUST00000096198 Smarca4Q3TKT4 1613 aaKnown RBP17.21■□□□□ 0.35
Scn8a-202ENSMUST00000096198 Rsf1E9PWW9 1441 aaKnown RBP17.18■□□□□ 0.34
Scn8a-202ENSMUST00000096198 Pabpn1Q8CCS6 302 aaKnown RBP17.09■□□□□ 0.33
Scn8a-202ENSMUST00000096198 Top2bQ64511 1612 aa17.07■□□□□ 0.32
Scn8a-202ENSMUST00000096198 Cecr2E9Q2Z1 1453 aa17.04■□□□□ 0.32
Scn8a-202ENSMUST00000096198 Zcchc6Q5BLK4 1491 aaKnown RBP17.01■□□□□ 0.31
Scn8a-202ENSMUST00000096198 Pelp1Q9DBD5 1123 aaKnown RBP17■□□□□ 0.31
Scn8a-202ENSMUST00000096198 Eif4g3Q80XI3 1579 aaKnown RBP16.98■□□□□ 0.31
Scn8a-202ENSMUST00000096198 Arhgef5E9Q7D5 1581 aa16.97■□□□□ 0.31
Scn8a-202ENSMUST00000096198 Baz1aO88379 1555 aa16.89■□□□□ 0.3
Scn8a-202ENSMUST00000096198 Kif21aQ9QXL2 1672 aa16.89■□□□□ 0.29
Scn8a-202ENSMUST00000096198 Zcchc11B2RX14 1644 aaKnown RBP16.87■□□□□ 0.29
Scn8a-202ENSMUST00000096198 Ttbk1Q6PCN3 1308 aa16.8■□□□□ 0.28
Scn8a-202ENSMUST00000096198 Crybg2B7ZCC2 1516 aa16.8■□□□□ 0.28
Scn8a-202ENSMUST00000096198 Plekhg3Q4VAC9 1341 aa16.7■□□□□ 0.26
Scn8a-202ENSMUST00000096198 Cux2P70298 1426 aa16.62■□□□□ 0.25
Scn8a-202ENSMUST00000096198 Adgrl3Q80TS3 1537 aa16.62■□□□□ 0.25
Scn8a-202ENSMUST00000096198 Plb1Q3TTY0 1478 aa16.56■□□□□ 0.24
Scn8a-202ENSMUST00000096198 Urb2E9Q7L1 1524 aaKnown RBP16.53■□□□□ 0.24
Scn8a-202ENSMUST00000096198 PtprtQ99M80 1454 aa16.52■□□□□ 0.23
Scn8a-202ENSMUST00000096198 Ccdc180J3QNE4 1664 aa16.48■□□□□ 0.23
Scn8a-202ENSMUST00000096198 Gm156Q58A37 223 aa16.42■□□□□ 0.22
Scn8a-202ENSMUST00000096198 Cep170Q6A065 1588 aa16.36■□□□□ 0.21
Scn8a-202ENSMUST00000096198 Kif15Q6P9L6 1387 aa16.35■□□□□ 0.21
Scn8a-202ENSMUST00000096198 PtprkP35822 1457 aa16.34■□□□□ 0.21
Scn8a-202ENSMUST00000096198 Rusc2Q80U22 1514 aa16.34■□□□□ 0.21
Scn8a-202ENSMUST00000096198 Pprc1Q6NZN1 1644 aa16.34■□□□□ 0.21
Scn8a-202ENSMUST00000096198 Npm1Q61937 292 aaKnown RBP16.29■□□□□ 0.2
Scn8a-202ENSMUST00000096198 Fbxo41Q6NS60 873 aa16.29■□□□□ 0.2
Scn8a-202ENSMUST00000096198 Phf23Q8BSN5 401 aa16.27■□□□□ 0.2
Scn8a-202ENSMUST00000096198 Gapvd1Q6PAR5 1458 aa16.22■□□□□ 0.19
Scn8a-202ENSMUST00000096198 Cyb5rlB1AS42 316 aa16.2■□□□□ 0.18
Scn8a-202ENSMUST00000096198 CftrP26361 1476 aa16.17■□□□□ 0.18
Scn8a-202ENSMUST00000096198 Dhx29Q6PGC1 1365 aaKnown RBP16.17■□□□□ 0.18
Scn8a-202ENSMUST00000096198 Cttnbp2B9EJA2 1648 aa16.15■□□□□ 0.18
Scn8a-202ENSMUST00000096198 Alpk3Q924C5 1678 aa16.14■□□□□ 0.18
Scn8a-202ENSMUST00000096198 Plppr3Q7TPB0 716 aa16.13■□□□□ 0.17
Scn8a-202ENSMUST00000096198 Hecw2Q6I6G8 1578 aa16.12■□□□□ 0.17
Scn8a-202ENSMUST00000096198 Synj1Q8CHC4 1574 aa16.12■□□□□ 0.17
Scn8a-202ENSMUST00000096198 Rhox8Q6VSS7 320 aa16.11■□□□□ 0.17
Scn8a-202ENSMUST00000096198 Ercc6l2Q9JIM3 1537 aa16.09■□□□□ 0.17
Scn8a-202ENSMUST00000096198 Ppp1r18Q8BQ30 594 aa16.08■□□□□ 0.16
Scn8a-202ENSMUST00000096198 Cep164Q5DU05 1446 aa16.08■□□□□ 0.16
Scn8a-202ENSMUST00000096198 Crocc2F6XLV1 1638 aa16.06■□□□□ 0.16
Scn8a-202ENSMUST00000096198 Rapgef2Q8CHG7 1496 aa16.02■□□□□ 0.15
Scn8a-202ENSMUST00000096198 Il27Q8K3I6 234 aa16.01■□□□□ 0.15
Scn8a-202ENSMUST00000096198 Ift140E9PY46 1464 aa16.01■□□□□ 0.15
Scn8a-202ENSMUST00000096198 Ccdc88bQ4QRL3 1481 aa15.97■□□□□ 0.15
Scn8a-202ENSMUST00000096198 Lamc3Q9R0B6 1581 aa15.96■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Setd1bQ8CFT2 1985 aa15.95■□□□□ 0.14
Scn8a-202ENSMUST00000096198 MlecQ6ZQI3 291 aaKnown RBP15.95■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Dnajc5gQ8C632 165 aa15.94■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Camsap1A2AHC3 1581 aa15.93■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Ecm2Q5FW85 670 aa15.93■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Setbp1Q9Z180 1582 aa15.92■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Ythdc2B2RR83 1445 aaKnown RBP15.92■□□□□ 0.14
Scn8a-202ENSMUST00000096198 GapdhsQ64467 440 aa15.9■□□□□ 0.14
Scn8a-202ENSMUST00000096198 Brwd3A2AHJ4 1799 aa15.89■□□□□ 0.13
Scn8a-202ENSMUST00000096198 Ak9G3UYQ4 1894 aa15.87■□□□□ 0.13
Scn8a-202ENSMUST00000096198 LrpprcQ6PB66 1392 aaKnown RBP15.86■□□□□ 0.13
Scn8a-202ENSMUST00000096198 Disp1Q3TDN0 1521 aa15.85■□□□□ 0.13
Scn8a-202ENSMUST00000096198 Esf1Q3V1V3 845 aaKnown RBP15.85■□□□□ 0.13
Scn8a-202ENSMUST00000096198 Abcc1O35379 1528 aa15.83■□□□□ 0.12
Scn8a-202ENSMUST00000096198 Top2aQ01320 1528 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 91.2 ms