Protein–RNA interactions for Protein: J3QMB3

Fam240b, Family with sequence similarity 240 member B, mousemouse

Predictions only

Length 78 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam240bJ3QMB3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Fam240bJ3QMB3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Fam240bJ3QMB3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Fam240bJ3QMB3 Psd-208ENSMUST00000224556 2034 ntBASIC22.05■■□□□ 1.12
Fam240bJ3QMB3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Fam240bJ3QMB3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Fam240bJ3QMB3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Fam240bJ3QMB3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam240bJ3QMB3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam240bJ3QMB3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam240bJ3QMB3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam240bJ3QMB3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam240bJ3QMB3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam240bJ3QMB3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam240bJ3QMB3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Fam240bJ3QMB3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam240bJ3QMB3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Fam240bJ3QMB3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Fam240bJ3QMB3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam240bJ3QMB3 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.94■□□□□ 0.94
Fam240bJ3QMB3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam240bJ3QMB3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Fam240bJ3QMB3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Fam240bJ3QMB3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Fam240bJ3QMB3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.6■□□□□ 0.89
Fam240bJ3QMB3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam240bJ3QMB3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam240bJ3QMB3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam240bJ3QMB3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam240bJ3QMB3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam240bJ3QMB3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam240bJ3QMB3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam240bJ3QMB3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.18■□□□□ 0.82
Fam240bJ3QMB3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam240bJ3QMB3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam240bJ3QMB3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam240bJ3QMB3 Zxda-201ENSMUST00000117281 2621 ntBASIC20.11■□□□□ 0.81
Fam240bJ3QMB3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam240bJ3QMB3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.08■□□□□ 0.8
Fam240bJ3QMB3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Fam240bJ3QMB3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fam240bJ3QMB3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam240bJ3QMB3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam240bJ3QMB3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam240bJ3QMB3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam240bJ3QMB3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Fam240bJ3QMB3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Fam240bJ3QMB3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fam240bJ3QMB3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam240bJ3QMB3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam240bJ3QMB3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam240bJ3QMB3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fam240bJ3QMB3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam240bJ3QMB3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fam240bJ3QMB3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fam240bJ3QMB3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.58■□□□□ 0.72
Fam240bJ3QMB3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam240bJ3QMB3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam240bJ3QMB3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fam240bJ3QMB3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam240bJ3QMB3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.49■□□□□ 0.71
Fam240bJ3QMB3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Fam240bJ3QMB3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam240bJ3QMB3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam240bJ3QMB3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam240bJ3QMB3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Fam240bJ3QMB3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam240bJ3QMB3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fam240bJ3QMB3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam240bJ3QMB3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam240bJ3QMB3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam240bJ3QMB3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam240bJ3QMB3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam240bJ3QMB3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam240bJ3QMB3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam240bJ3QMB3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam240bJ3QMB3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fam240bJ3QMB3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam240bJ3QMB3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam240bJ3QMB3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam240bJ3QMB3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam240bJ3QMB3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam240bJ3QMB3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fam240bJ3QMB3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.05■□□□□ 0.64
Fam240bJ3QMB3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Fam240bJ3QMB3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.04■□□□□ 0.64
Fam240bJ3QMB3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Fam240bJ3QMB3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam240bJ3QMB3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam240bJ3QMB3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam240bJ3QMB3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Fam240bJ3QMB3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam240bJ3QMB3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam240bJ3QMB3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam240bJ3QMB3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fam240bJ3QMB3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam240bJ3QMB3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam240bJ3QMB3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam240bJ3QMB3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam240bJ3QMB3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms