Protein–RNA interactions for Protein: J3QMB3

Fam240b, Family with sequence similarity 240 member B, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam240bJ3QMB3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Fam240bJ3QMB3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Fam240bJ3QMB3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Fam240bJ3QMB3 Psd-208ENSMUST00000224556 2034 ntBASIC22.05■■□□□ 1.12
Fam240bJ3QMB3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Fam240bJ3QMB3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Fam240bJ3QMB3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Fam240bJ3QMB3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Fam240bJ3QMB3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam240bJ3QMB3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam240bJ3QMB3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam240bJ3QMB3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Fam240bJ3QMB3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Fam240bJ3QMB3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Fam240bJ3QMB3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Fam240bJ3QMB3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam240bJ3QMB3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Fam240bJ3QMB3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Fam240bJ3QMB3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fam240bJ3QMB3 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.94■□□□□ 0.94
Fam240bJ3QMB3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fam240bJ3QMB3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Fam240bJ3QMB3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Fam240bJ3QMB3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Fam240bJ3QMB3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.6■□□□□ 0.89
Fam240bJ3QMB3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam240bJ3QMB3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam240bJ3QMB3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam240bJ3QMB3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fam240bJ3QMB3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Fam240bJ3QMB3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam240bJ3QMB3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam240bJ3QMB3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.18■□□□□ 0.82
Fam240bJ3QMB3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam240bJ3QMB3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam240bJ3QMB3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam240bJ3QMB3 Zxda-201ENSMUST00000117281 2621 ntBASIC20.11■□□□□ 0.81
Fam240bJ3QMB3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam240bJ3QMB3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.08■□□□□ 0.8
Fam240bJ3QMB3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Fam240bJ3QMB3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Fam240bJ3QMB3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Fam240bJ3QMB3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam240bJ3QMB3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Fam240bJ3QMB3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam240bJ3QMB3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Fam240bJ3QMB3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Fam240bJ3QMB3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Fam240bJ3QMB3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam240bJ3QMB3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam240bJ3QMB3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fam240bJ3QMB3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fam240bJ3QMB3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fam240bJ3QMB3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Fam240bJ3QMB3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fam240bJ3QMB3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.58■□□□□ 0.72
Fam240bJ3QMB3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam240bJ3QMB3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam240bJ3QMB3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fam240bJ3QMB3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam240bJ3QMB3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.49■□□□□ 0.71
Fam240bJ3QMB3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Fam240bJ3QMB3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam240bJ3QMB3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam240bJ3QMB3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam240bJ3QMB3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Fam240bJ3QMB3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fam240bJ3QMB3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Fam240bJ3QMB3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fam240bJ3QMB3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fam240bJ3QMB3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fam240bJ3QMB3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fam240bJ3QMB3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fam240bJ3QMB3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fam240bJ3QMB3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fam240bJ3QMB3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam240bJ3QMB3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fam240bJ3QMB3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam240bJ3QMB3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam240bJ3QMB3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Fam240bJ3QMB3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Fam240bJ3QMB3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Fam240bJ3QMB3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Fam240bJ3QMB3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.05■□□□□ 0.64
Fam240bJ3QMB3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Fam240bJ3QMB3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.04■□□□□ 0.64
Fam240bJ3QMB3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Fam240bJ3QMB3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Fam240bJ3QMB3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam240bJ3QMB3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Fam240bJ3QMB3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Fam240bJ3QMB3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam240bJ3QMB3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam240bJ3QMB3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Fam240bJ3QMB3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Fam240bJ3QMB3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Fam240bJ3QMB3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Fam240bJ3QMB3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Fam240bJ3QMB3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Fam240bJ3QMB3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms