Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Gm25239-201ENSMUST00000174915 86 ntBASIC12.42□□□□□ -0.42
Hmcn1D3YXG0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmcn1D3YXG0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmcn1D3YXG0 Gm24109-201ENSMUST00000175489 103 ntBASIC11□□□□□ -0.65
Hmcn1D3YXG0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmcn1D3YXG0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Hmcn1D3YXG0 Gm15042-201ENSMUST00000120212 883 ntBASIC10.44□□□□□ -0.74
Hmcn1D3YXG0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmcn1D3YXG0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hmcn1D3YXG0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Hmcn1D3YXG0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC10.24□□□□□ -0.77
Hmcn1D3YXG0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC10.22□□□□□ -0.77
Hmcn1D3YXG0 Gm23366-201ENSMUST00000175022 89 ntBASIC10.22□□□□□ -0.77
Hmcn1D3YXG0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hmcn1D3YXG0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Hmcn1D3YXG0 Gm15045-201ENSMUST00000117359 883 ntBASIC10.15□□□□□ -0.78
Hmcn1D3YXG0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC9.96□□□□□ -0.82
Hmcn1D3YXG0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Hmcn1D3YXG0 Gm25238-201ENSMUST00000174914 89 ntBASIC9.88□□□□□ -0.83
Hmcn1D3YXG0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Hmcn1D3YXG0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Hmcn1D3YXG0 Gm25262-201ENSMUST00000174934 133 ntBASIC9.7□□□□□ -0.86
Hmcn1D3YXG0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Hmcn1D3YXG0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Hmcn1D3YXG0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Hmcn1D3YXG0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Hmcn1D3YXG0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hmcn1D3YXG0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hmcn1D3YXG0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC9.52□□□□□ -0.88
Hmcn1D3YXG0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC9.52□□□□□ -0.89
Hmcn1D3YXG0 Gm26115-201ENSMUST00000175605 87 ntBASIC9.52□□□□□ -0.89
Hmcn1D3YXG0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC9.47□□□□□ -0.89
Hmcn1D3YXG0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hmcn1D3YXG0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Hmcn1D3YXG0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC9.38□□□□□ -0.91
Hmcn1D3YXG0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC9.38□□□□□ -0.91
Hmcn1D3YXG0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Hmcn1D3YXG0 Gm8109-201ENSMUST00000194076 746 ntBASIC9.35□□□□□ -0.91
Hmcn1D3YXG0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC9.3□□□□□ -0.92
Hmcn1D3YXG0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC9.26□□□□□ -0.93
Hmcn1D3YXG0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Hmcn1D3YXG0 Rab21-202ENSMUST00000218831 843 ntBASIC9.19□□□□□ -0.94
Hmcn1D3YXG0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hmcn1D3YXG0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hmcn1D3YXG0 Gm24804-201ENSMUST00000174982 85 ntBASIC9.14□□□□□ -0.95
Hmcn1D3YXG0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Hmcn1D3YXG0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC9.14□□□□□ -0.95
Hmcn1D3YXG0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC9.13□□□□□ -0.95
Hmcn1D3YXG0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hmcn1D3YXG0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmcn1D3YXG0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC9.1□□□□□ -0.95
Hmcn1D3YXG0 Gm27325-201ENSMUST00000175467 74 ntBASIC9.07□□□□□ -0.96
Hmcn1D3YXG0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC9.06□□□□□ -0.96
Hmcn1D3YXG0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmcn1D3YXG0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmcn1D3YXG0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmcn1D3YXG0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmcn1D3YXG0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmcn1D3YXG0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Hmcn1D3YXG0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC8.99□□□□□ -0.97
Hmcn1D3YXG0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hmcn1D3YXG0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC8.97□□□□□ -0.97
Hmcn1D3YXG0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hmcn1D3YXG0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hmcn1D3YXG0 Gm17082-201ENSMUST00000166043 1091 ntBASIC8.96□□□□□ -0.97
Hmcn1D3YXG0 Zfp131-205ENSMUST00000223812 663 ntBASIC8.96□□□□□ -0.98
Hmcn1D3YXG0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmcn1D3YXG0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmcn1D3YXG0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmcn1D3YXG0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Hmcn1D3YXG0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Hmcn1D3YXG0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC8.9□□□□□ -0.99
Hmcn1D3YXG0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC8.89□□□□□ -0.99
Hmcn1D3YXG0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmcn1D3YXG0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmcn1D3YXG0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmcn1D3YXG0 Gm5987-201ENSMUST00000196433 1151 ntBASIC8.83□□□□□ -1
Hmcn1D3YXG0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmcn1D3YXG0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmcn1D3YXG0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmcn1D3YXG0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hmcn1D3YXG0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmcn1D3YXG0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hmcn1D3YXG0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Hmcn1D3YXG0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC8.8□□□□□ -1
Hmcn1D3YXG0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Hmcn1D3YXG0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC8.77□□□□□ -1.01
Hmcn1D3YXG0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmcn1D3YXG0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC8.77□□□□□ -1.01
Hmcn1D3YXG0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmcn1D3YXG0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC8.76□□□□□ -1.01
Hmcn1D3YXG0 Gm27322-201ENSMUST00000184007 104 ntBASIC8.76□□□□□ -1.01
Hmcn1D3YXG0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC8.75□□□□□ -1.01
Hmcn1D3YXG0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmcn1D3YXG0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Hmcn1D3YXG0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Hmcn1D3YXG0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Hmcn1D3YXG0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC8.72□□□□□ -1.01
Hmcn1D3YXG0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Hmcn1D3YXG0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms