RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Gm28374F6SG70 93 aa12.75□□□□□ -0.37
Trim27-207ENSMUST00000223065 Ccdc179J3QM76 67 aa12.75□□□□□ -0.37
Trim27-207ENSMUST00000223065 Anapc11Q9CPX9 84 aa12.72□□□□□ -0.37
Trim27-207ENSMUST00000223065 Dnah5Q8VHE6 4621 aa12.72□□□□□ -0.37
Trim27-207ENSMUST00000223065 Gm2310J3QNJ2 377 aa12.72□□□□□ -0.37
Trim27-207ENSMUST00000223065 SnurfQ9WU12 71 aa12.71□□□□□ -0.37
Trim27-207ENSMUST00000223065 Coa6Q8BGD8 79 aa12.69□□□□□ -0.38
Trim27-207ENSMUST00000223065 Ryr2E9Q401 4966 aaKnown RBP12.69□□□□□ -0.38
Trim27-207ENSMUST00000223065 Ryr1E9PZQ0 5035 aa12.68□□□□□ -0.38
Trim27-207ENSMUST00000223065 Pet100P0DJE0 76 aa12.67□□□□□ -0.38
Trim27-207ENSMUST00000223065 Gm16253D3Z167 63 aa12.63□□□□□ -0.39
Trim27-207ENSMUST00000223065 Spint4Q9D263 159 aa12.63□□□□□ -0.39
Trim27-207ENSMUST00000223065 Bean1Q9EQG5 255 aa12.62□□□□□ -0.39
Trim27-207ENSMUST00000223065 1700074P13RikQ9D9G7 251 aa12.6□□□□□ -0.39
Trim27-207ENSMUST00000223065 Atox1O08997 68 aaKnown RBP12.59□□□□□ -0.39
Trim27-207ENSMUST00000223065 Wfdc3Q14AE4 130 aa12.59□□□□□ -0.39
Trim27-207ENSMUST00000223065 Vps13dB1ART2 4390 aa12.59□□□□□ -0.39
Trim27-207ENSMUST00000223065 Krtap13O88375 197 aa12.59□□□□□ -0.39
Trim27-207ENSMUST00000223065 A530084C06RikQ3UTW2 186 aa12.55□□□□□ -0.4
Trim27-207ENSMUST00000223065 Defb12Q8K4N3 78 aa12.52□□□□□ -0.4
Trim27-207ENSMUST00000223065 Igkv3-3A0A140T8Q0 119 aa12.5□□□□□ -0.41
Trim27-207ENSMUST00000223065 Stard9Q80TF6 4561 aa12.49□□□□□ -0.41
Trim27-207ENSMUST00000223065 Sec61gP60060 68 aa12.49□□□□□ -0.41
Trim27-207ENSMUST00000223065 Dnah2P0C6F1 4456 aa12.49□□□□□ -0.41
Trim27-207ENSMUST00000223065 Pkd1O08852 4293 aa12.47□□□□□ -0.41
Trim27-207ENSMUST00000223065 Hectd4E9Q2E4 4418 aa12.44□□□□□ -0.42
Trim27-207ENSMUST00000223065 Gm2696A0A1W2P709 240 aa12.44□□□□□ -0.42
Trim27-207ENSMUST00000223065 Coa5Q99M07 74 aa12.44□□□□□ -0.42
Trim27-207ENSMUST00000223065 Gm10267M0QWD8 85 aa12.42□□□□□ -0.42
Trim27-207ENSMUST00000223065 ApobE9Q414 4505 aa12.41□□□□□ -0.42
Trim27-207ENSMUST00000223065 Cdc42se1Q8BHL7 80 aa12.38□□□□□ -0.43
Trim27-207ENSMUST00000223065 Chtf8P0CG14 533 aa12.37□□□□□ -0.43
Trim27-207ENSMUST00000223065 Sox16Q62247 57 aa12.36□□□□□ -0.43
Trim27-207ENSMUST00000223065 Spaca4Q80ZQ0 127 aa12.35□□□□□ -0.43
Trim27-207ENSMUST00000223065 Lrp1bQ9JI18 4599 aa12.33□□□□□ -0.44
Trim27-207ENSMUST00000223065 Cypt15B1AXS0 87 aa12.3□□□□□ -0.44
Trim27-207ENSMUST00000223065 Gm10197F6QEY5 67 aa12.25□□□□□ -0.45
Trim27-207ENSMUST00000223065 Dync1h1Q9JHU4 4644 aaKnown RBP12.24□□□□□ -0.45
Trim27-207ENSMUST00000223065 Gm10160F6Y577 67 aa12.23□□□□□ -0.45
Trim27-207ENSMUST00000223065 Defb13Q8R2I4 64 aa12.22□□□□□ -0.45
Trim27-207ENSMUST00000223065 SacsQ9JLC8 4582 aa12.19□□□□□ -0.46
Trim27-207ENSMUST00000223065 Fat1A0A1L1SQU7 4645 aa12.18□□□□□ -0.46
Trim27-207ENSMUST00000223065 Defb38Q7TNV7 63 aa12.16□□□□□ -0.46
Trim27-207ENSMUST00000223065 Pkhd1E9PZ36 4059 aa12.14□□□□□ -0.47
Trim27-207ENSMUST00000223065 4933415A04RikQ9D443 101 aa12.13□□□□□ -0.47
Trim27-207ENSMUST00000223065 Phxr4P15974 95 aa12.03□□□□□ -0.48
Trim27-207ENSMUST00000223065 Gm10643Q3URG9 111 aa12.02□□□□□ -0.49
Trim27-207ENSMUST00000223065 RetnlbQ99P86 105 aa12.01□□□□□ -0.49
Trim27-207ENSMUST00000223065 Fat2Q5F226 4351 aa12.01□□□□□ -0.49
Trim27-207ENSMUST00000223065 Gm21798J3QNU5 87 aa11.98□□□□□ -0.49
Trim27-207ENSMUST00000223065 Kmt2cQ8BRH4 4903 aa11.93□□□□□ -0.5
Trim27-207ENSMUST00000223065 Rps29P62274 56 aa11.92□□□□□ -0.5
Trim27-207ENSMUST00000223065 Gm20661K7N787 53 aa11.86□□□□□ -0.51
Trim27-207ENSMUST00000223065 Herc2Q4U2R1 4836 aa11.85□□□□□ -0.51
Trim27-207ENSMUST00000223065 1700042G07RikB1AUF7 90 aa11.84□□□□□ -0.51
Trim27-207ENSMUST00000223065 Krtap3-2Q9D638 99 aa11.83□□□□□ -0.52
Trim27-207ENSMUST00000223065 Krtap3-3Q9D7P0 99 aa11.83□□□□□ -0.52
Trim27-207ENSMUST00000223065 Gm26620Q9CY65 116 aa11.82□□□□□ -0.52
Trim27-207ENSMUST00000223065 Gm10999F6Q4M4 69 aa11.82□□□□□ -0.52
Trim27-207ENSMUST00000223065 Dnah8Q91XQ0 4731 aa11.81□□□□□ -0.52
Trim27-207ENSMUST00000223065 Q8BGJ3 129 aa11.76□□□□□ -0.53
Trim27-207ENSMUST00000223065 Gm11939A2A592 99 aa11.75□□□□□ -0.53
Trim27-207ENSMUST00000223065 Birc6O88738 4882 aa11.74□□□□□ -0.53
Trim27-207ENSMUST00000223065 2310034C09RikQ9D746 214 aa11.72□□□□□ -0.53
Trim27-207ENSMUST00000223065 Vps13bQ80TY5 3993 aa11.7□□□□□ -0.54
Trim27-207ENSMUST00000223065 Kiaa1109A2AAE1 5005 aa11.7□□□□□ -0.54
Trim27-207ENSMUST00000223065 9230102O04RikA2ASX7 82 aa11.67□□□□□ -0.54
Trim27-207ENSMUST00000223065 A930033H14RikG5E8X6 103 aa11.67□□□□□ -0.54
Trim27-207ENSMUST00000223065 2310079G19RikQ9D6L6 185 aa11.67□□□□□ -0.54
Trim27-207ENSMUST00000223065 Abca13Q5SSE9 5034 aa11.65□□□□□ -0.54
Trim27-207ENSMUST00000223065 Pkhd1l1Q80ZA4 4249 aa11.64□□□□□ -0.55
Trim27-207ENSMUST00000223065 Krtap19-5O08632 62 aa11.64□□□□□ -0.55
Trim27-207ENSMUST00000223065 Ndufb1P0DN34 57 aa11.63□□□□□ -0.55
Trim27-207ENSMUST00000223065 Lrp1Q91ZX7 4545 aaKnown RBP11.59□□□□□ -0.55
Trim27-207ENSMUST00000223065 Uqcr11Q9CPX8 56 aa11.58□□□□□ -0.56
Trim27-207ENSMUST00000223065 Gm4491E0CX42 125 aa11.57□□□□□ -0.56
Trim27-207ENSMUST00000223065 Limd2Q8BGB5 128 aa11.57□□□□□ -0.56
Trim27-207ENSMUST00000223065 PcloQ9QYX7 5068 aa11.56□□□□□ -0.56
Trim27-207ENSMUST00000223065 Gm3646F6S692 53 aa11.55□□□□□ -0.56
Trim27-207ENSMUST00000223065 4930507D05RikQ8C9C9 103 aa11.54□□□□□ -0.56
Trim27-207ENSMUST00000223065 SptssbQ925E8 76 aa11.54□□□□□ -0.56
Trim27-207ENSMUST00000223065 HydinQ80W93 5154 aa11.52□□□□□ -0.56
Trim27-207ENSMUST00000223065 Fat3Q8BNA6 4555 aa11.46□□□□□ -0.57
Trim27-207ENSMUST00000223065 Defb1P56386 69 aa11.46□□□□□ -0.57
Trim27-207ENSMUST00000223065 Gm5767A0A0J9YTU8 78 aa11.45□□□□□ -0.58
Trim27-207ENSMUST00000223065 D6Ertd527eA0A0N4SWI3 464 aa11.43□□□□□ -0.58
Trim27-207ENSMUST00000223065 Lce1mQ9CR91 182 aa11.42□□□□□ -0.58
Trim27-207ENSMUST00000223065 Dnhd1D3Z2X2 4750 aa11.42□□□□□ -0.58
Trim27-207ENSMUST00000223065 Gm9736A0A1W2P7N1 277 aa11.38□□□□□ -0.59
Trim27-207ENSMUST00000223065 Mycbp2Q7TPH6 4711 aa11.29□□□□□ -0.6
Trim27-207ENSMUST00000223065 Gm5965D3Z724 196 aa11.24□□□□□ -0.61
Trim27-207ENSMUST00000223065 Herc1E9PZP8 4859 aa11.21□□□□□ -0.62
Trim27-207ENSMUST00000223065 Gm9821Q8K076 103 aa11.15□□□□□ -0.62
Trim27-207ENSMUST00000223065 Krtap15-1Q9QZU5 150 aa11.13□□□□□ -0.63
Trim27-207ENSMUST00000223065 Rpl37Q9D823 97 aa11.13□□□□□ -0.63
Trim27-207ENSMUST00000223065 Rnase13Q5GAM7 153 aa11.1□□□□□ -0.63
Trim27-207ENSMUST00000223065 Cox6b2Q80ZN9 88 aa11.1□□□□□ -0.63
Trim27-207ENSMUST00000223065 Ndufs5Q99LY9 106 aa11.09□□□□□ -0.63
Trim27-207ENSMUST00000223065 Gm18596A0A1W2P860 280 aa11.09□□□□□ -0.63
Trim27-207ENSMUST00000223065 Lrp2A2ARV4 4660 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms