RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 NischQ80TM9 1593 aa42.37■■■■■ 4.37
Trim27-207ENSMUST00000223065 Gm35339A0A140LHH9 1649 aa41.93■■■■■ 4.3
Trim27-207ENSMUST00000223065 Abcc9P70170 1546 aa41.15■■■■■ 4.18
Trim27-207ENSMUST00000223065 Abcc8B2RUS7 1588 aa40.38■■■■■ 4.06
Trim27-207ENSMUST00000223065 Rhox8Q6VSS7 320 aa38.7■■■■□ 3.79
Trim27-207ENSMUST00000223065 Rtl1Q7M732 1744 aa37.97■■■■□ 3.67
Trim27-207ENSMUST00000223065 ScribQ80U72 1612 aa37.86■■■■□ 3.65
Trim27-207ENSMUST00000223065 Dcaf1Q80TR8 1506 aa37.68■■■■□ 3.62
Trim27-207ENSMUST00000223065 Ccdc180J3QNE4 1664 aa37.16■■■■□ 3.54
Trim27-207ENSMUST00000223065 Rb1cc1Q9ESK9 1588 aa37.08■■■■□ 3.53
Trim27-207ENSMUST00000223065 Kdm5dQ62240 1548 aa37.02■■■■□ 3.52
Trim27-207ENSMUST00000223065 NacadQ5SWP3 1504 aa36.83■■■■□ 3.49
Trim27-207ENSMUST00000223065 Zcchc6Q5BLK4 1491 aaKnown RBP36.71■■■■□ 3.47
Trim27-207ENSMUST00000223065 Baz1aO88379 1555 aa36.67■■■■□ 3.46
Trim27-207ENSMUST00000223065 Crybg2B7ZCC2 1516 aa36.19■■■■□ 3.38
Trim27-207ENSMUST00000223065 Sycp2Q9CUU3 1500 aa36.03■■■■□ 3.36
Trim27-207ENSMUST00000223065 Ccdc136Q3TVA9 1136 aa35.96■■■■□ 3.35
Trim27-207ENSMUST00000223065 Smarca2Q6DIC0 1577 aa35.81■■■■□ 3.32
Trim27-207ENSMUST00000223065 HrcG5E8J6 738 aa35.53■■■■□ 3.28
Trim27-207ENSMUST00000223065 BicraF8VPZ9 1578 aa35.42■■■■□ 3.26
Trim27-207ENSMUST00000223065 Trim41Q5NCC3 630 aa35.37■■■■□ 3.25
Trim27-207ENSMUST00000223065 Cecr2E9Q2Z1 1453 aa35■■■■□ 3.19
Trim27-207ENSMUST00000223065 Brd4Q9ESU6 1400 aaKnown RBP34.94■■■■□ 3.18
Trim27-207ENSMUST00000223065 Synj1Q8CHC4 1574 aa34.64■■■■□ 3.14
Trim27-207ENSMUST00000223065 Cep164Q5DU05 1446 aa34.57■■■■□ 3.13
Trim27-207ENSMUST00000223065 CftrP26361 1476 aa34.51■■■■□ 3.12
Trim27-207ENSMUST00000223065 Golga3P55937 1487 aa34.44■■■■□ 3.1
Trim27-207ENSMUST00000223065 Cngb1E1AZ71 1325 aa34.41■■■■□ 3.1
Trim27-207ENSMUST00000223065 Smarca4Q3TKT4 1613 aaKnown RBP34.38■■■■□ 3.09
Trim27-207ENSMUST00000223065 Cttnbp2B9EJA2 1648 aa34.34■■■■□ 3.09
Trim27-207ENSMUST00000223065 Rsf1E9PWW9 1441 aaKnown RBP34.27■■■■□ 3.08
Trim27-207ENSMUST00000223065 Dnajc5bQ9CQ94 199 aa34.27■■■■□ 3.08
Trim27-207ENSMUST00000223065 Pds5bQ4VA53 1446 aaKnown RBP34.25■■■■□ 3.07
Trim27-207ENSMUST00000223065 Chic1Q8CBW7 227 aa34.2■■■■□ 3.06
Trim27-207ENSMUST00000223065 Rpgrip1Q9EPQ2 1331 aa34.16■■■■□ 3.06
Trim27-207ENSMUST00000223065 Esf1Q3V1V3 845 aaKnown RBP34.16■■■■□ 3.06
Trim27-207ENSMUST00000223065 Ccdc88bQ4QRL3 1481 aa34.11■■■■□ 3.05
Trim27-207ENSMUST00000223065 Top2bQ64511 1612 aa34.11■■■■□ 3.05
Trim27-207ENSMUST00000223065 Atad2bE9Q166 1460 aaKnown RBP33.99■■■■□ 3.03
Trim27-207ENSMUST00000223065 Thoc2B1AZI6 1594 aaKnown RBP33.96■■■■□ 3.03
Trim27-207ENSMUST00000223065 Iqgap2Q3UQ44 1575 aa33.94■■■■□ 3.02
Trim27-207ENSMUST00000223065 Ehmt2Q9Z148 1263 aaKnown RBP33.94■■■■□ 3.02
Trim27-207ENSMUST00000223065 Acin1Q9JIX8 1338 aaKnown RBP33.9■■■■□ 3.02
Trim27-207ENSMUST00000223065 Gab3Q8BSM5 595 aa33.75■■■□□ 2.99
Trim27-207ENSMUST00000223065 Cc2d2aQ8CFW7 1633 aa33.71■■■□□ 2.99
Trim27-207ENSMUST00000223065 Fmn1Q05860 1466 aa33.61■■■□□ 2.97
Trim27-207ENSMUST00000223065 Ercc6F8VPZ5 1481 aa33.55■■■□□ 2.96
Trim27-207ENSMUST00000223065 Top2aQ01320 1528 aaKnown RBP33.38■■■□□ 2.93
Trim27-207ENSMUST00000223065 Frmpd1A2AKB4 1549 aa33.33■■■□□ 2.93
Trim27-207ENSMUST00000223065 Wdr62Q3U3T8 1523 aa33.33■■■□□ 2.93
Trim27-207ENSMUST00000223065 Rapgef2Q8CHG7 1496 aa33.24■■■□□ 2.91
Trim27-207ENSMUST00000223065 Fam135aQ6NS59 1506 aa33.2■■■□□ 2.9
Trim27-207ENSMUST00000223065 TnnQ80Z71 1560 aa33.19■■■□□ 2.9
Trim27-207ENSMUST00000223065 Lamc3Q9R0B6 1581 aa33■■■□□ 2.87
Trim27-207ENSMUST00000223065 Phldb1Q6PDH0 1371 aaKnown RBP32.99■■■□□ 2.87
Trim27-207ENSMUST00000223065 Cep162Q6ZQ06 1403 aa32.96■■■□□ 2.87
Trim27-207ENSMUST00000223065 Unc13aQ4KUS2 1712 aa32.94■■■□□ 2.86
Trim27-207ENSMUST00000223065 Kif15Q6P9L6 1387 aa32.84■■■□□ 2.85
Trim27-207ENSMUST00000223065 Npm2Q80W85 207 aa32.76■■■□□ 2.83
Trim27-207ENSMUST00000223065 Eif4g1Q6NZJ6 1600 aaKnown RBP32.75■■■□□ 2.83
Trim27-207ENSMUST00000223065 Ubl4bQ9CQ84 188 aa32.73■■■□□ 2.83
Trim27-207ENSMUST00000223065 Myt1lP97500 1187 aa32.66■■■□□ 2.82
Trim27-207ENSMUST00000223065 Camsap1A2AHC3 1581 aa32.65■■■□□ 2.82
Trim27-207ENSMUST00000223065 Baz1bQ9Z277 1479 aa32.61■■■□□ 2.81
Trim27-207ENSMUST00000223065 NrkQ9R0G8 1455 aa32.58■■■□□ 2.81
Trim27-207ENSMUST00000223065 PtprkP35822 1457 aa32.58■■■□□ 2.81
Trim27-207ENSMUST00000223065 Il27Q8K3I6 234 aa32.56■■■□□ 2.8
Trim27-207ENSMUST00000223065 Ccdc18Q640L5 1455 aa32.52■■■□□ 2.8
Trim27-207ENSMUST00000223065 Arhgap35Q91YM2 1499 aa32.51■■■□□ 2.79
Trim27-207ENSMUST00000223065 Mier1Q5UAK0 511 aa32.51■■■□□ 2.79
Trim27-207ENSMUST00000223065 Shroom4Q1W617 1475 aa32.48■■■□□ 2.79
Trim27-207ENSMUST00000223065 Mrc2Q64449 1479 aa32.44■■■□□ 2.78
Trim27-207ENSMUST00000223065 Grin2bQ01097 1482 aa32.42■■■□□ 2.78
Trim27-207ENSMUST00000223065 Clip1Q922J3 1391 aa32.37■■■□□ 2.77
Trim27-207ENSMUST00000223065 Cux2P70298 1426 aa32.36■■■□□ 2.77
Trim27-207ENSMUST00000223065 NefmP08553 848 aa32.33■■■□□ 2.77
Trim27-207ENSMUST00000223065 Map3k1P53349 1493 aa32.3■■■□□ 2.76
Trim27-207ENSMUST00000223065 UbtfP25976 765 aaKnown RBP32.29■■■□□ 2.76
Trim27-207ENSMUST00000223065 Npm1Q61937 292 aaKnown RBP32.21■■■□□ 2.75
Trim27-207ENSMUST00000223065 Mroh2bQ7M6Y6 1581 aa32.17■■■□□ 2.74
Trim27-207ENSMUST00000223065 Eea1Q8BL66 1411 aa32.16■■■□□ 2.74
Trim27-207ENSMUST00000223065 LrpprcQ6PB66 1392 aaKnown RBP32.11■■■□□ 2.73
Trim27-207ENSMUST00000223065 Efcab5A0JP43 1406 aa32.1■■■□□ 2.73
Trim27-207ENSMUST00000223065 Pcgf6Q99NA9 353 aa32.1■■■□□ 2.73
Trim27-207ENSMUST00000223065 Zeb1Q64318 1117 aa32.05■■■□□ 2.72
Trim27-207ENSMUST00000223065 Arap1Q4LDD4 1452 aa32.05■■■□□ 2.72
Trim27-207ENSMUST00000223065 Plekhg3Q4VAC9 1341 aa32.04■■■□□ 2.72
Trim27-207ENSMUST00000223065 PogzQ8BZH4 1409 aaKnown RBP32.04■■■□□ 2.72
Trim27-207ENSMUST00000223065 Setd5Q5XJV7 1441 aa32.02■■■□□ 2.72
Trim27-207ENSMUST00000223065 AqrQ8CFQ3 1481 aaKnown RBP32.01■■■□□ 2.71
Trim27-207ENSMUST00000223065 Duox2A2AQ99 1517 aa31.97■■■□□ 2.71
Trim27-207ENSMUST00000223065 Arhgef5E9Q7D5 1581 aa31.97■■■□□ 2.71
Trim27-207ENSMUST00000223065 Erich3F6QRE9 1637 aa31.86■■■□□ 2.69
Trim27-207ENSMUST00000223065 Kif21aQ9QXL2 1672 aa31.85■■■□□ 2.69
Trim27-207ENSMUST00000223065 Ankrd26Q811D2 1581 aa31.85■■■□□ 2.69
Trim27-207ENSMUST00000223065 Carmil1Q6EDY6 1374 aa31.84■■■□□ 2.69
Trim27-207ENSMUST00000223065 Dhx29Q6PGC1 1365 aaKnown RBP31.82■■■□□ 2.68
Trim27-207ENSMUST00000223065 Ap3b1Q9Z1T1 1105 aa31.81■■■□□ 2.68
Trim27-207ENSMUST00000223065 Ncapd3Q6ZQK0 1506 aa31.81■■■□□ 2.68
Trim27-207ENSMUST00000223065 Supt5hO55201 1082 aaKnown RBP31.79■■■□□ 2.68
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms