RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 UqcrqQ9CQ69 82 aa10.58□□□□□ -0.72
Scn1b-203ENSMUST00000211945 4932415D10RikA0A1W2P6U8 4986 aa10.58□□□□□ -0.72
Scn1b-203ENSMUST00000211945 Gm20604F8WIA3 75 aa10.58□□□□□ -0.72
Scn1b-203ENSMUST00000211945 Cystm1Q8K353 104 aa10.57□□□□□ -0.72
Scn1b-203ENSMUST00000211945 Mrpl34Q99N91 92 aa10.57□□□□□ -0.72
Scn1b-203ENSMUST00000211945 A930033H14RikG5E8X6 103 aa10.56□□□□□ -0.72
Scn1b-203ENSMUST00000211945 Igkv8-21A0A140T8P7 120 aa10.55□□□□□ -0.72
Scn1b-203ENSMUST00000211945 C130032M10RikQ8C888 123 aa10.54□□□□□ -0.72
Scn1b-203ENSMUST00000211945 GhrhP16043 103 aa10.53□□□□□ -0.72
Scn1b-203ENSMUST00000211945 Gm5965D3Z724 196 aa10.52□□□□□ -0.73
Scn1b-203ENSMUST00000211945 Ubr4A2AN08 5180 aa10.49□□□□□ -0.73
Scn1b-203ENSMUST00000211945 Gm11939A2A592 99 aa10.47□□□□□ -0.73
Scn1b-203ENSMUST00000211945 Trav3-1Q5R1I8 114 aa10.45□□□□□ -0.74
Scn1b-203ENSMUST00000211945 Hmcn2A2AJ76 5100 aa10.45□□□□□ -0.74
Scn1b-203ENSMUST00000211945 Cypt15B1AXS0 87 aa10.44□□□□□ -0.74
Scn1b-203ENSMUST00000211945 Gm5767A0A0J9YTU8 78 aa10.43□□□□□ -0.74
Scn1b-203ENSMUST00000211945 Ubl5Q9EPV8 73 aa10.38□□□□□ -0.75
Scn1b-203ENSMUST00000211945 Reg3aO09037 175 aa10.37□□□□□ -0.75
Scn1b-203ENSMUST00000211945 MplkipQ9D011 178 aa10.33□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Gm26620Q9CY65 116 aa10.33□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Defa21Q8C1P2 93 aa10.31□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Lyrm7Q9DA03 104 aa10.3□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Cdip1Q9DB75 208 aa10.29□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Igkv8-19A0A0G2JFN8 121 aa10.28□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Igkv3-3A0A140T8Q0 119 aa10.28□□□□□ -0.76
Scn1b-203ENSMUST00000211945 BatfO35284 125 aa10.28□□□□□ -0.76
Scn1b-203ENSMUST00000211945 Tmem254aP0DN89 123 aa10.21□□□□□ -0.78
Scn1b-203ENSMUST00000211945 Tmem254bP0DN90 123 aa10.21□□□□□ -0.78
Scn1b-203ENSMUST00000211945 Tmem254cP0DN91 123 aa10.21□□□□□ -0.78
Scn1b-203ENSMUST00000211945 Gm9821Q8K076 103 aa10.21□□□□□ -0.78
Scn1b-203ENSMUST00000211945 BikO70337 150 aa10.13□□□□□ -0.79
Scn1b-203ENSMUST00000211945 Krtap15-1Q9QZU5 150 aa10.12□□□□□ -0.79
Scn1b-203ENSMUST00000211945 Defb13Q8R2I4 64 aa10.1□□□□□ -0.79
Scn1b-203ENSMUST00000211945 Atp5eP56382 52 aa10.08□□□□□ -0.8
Scn1b-203ENSMUST00000211945 Gm10267M0QWD8 85 aa10.07□□□□□ -0.8
Scn1b-203ENSMUST00000211945 Prr15lQ8JZM2 100 aa10.07□□□□□ -0.8
Scn1b-203ENSMUST00000211945 Rpl37Q9D823 97 aa10.07□□□□□ -0.8
Scn1b-203ENSMUST00000211945 Anapc13Q8R034 74 aa10.07□□□□□ -0.8
Scn1b-203ENSMUST00000211945 Scgb1b2O35176 93 aa10.03□□□□□ -0.8
Scn1b-203ENSMUST00000211945 Krtap3-2Q9D638 99 aa10.02□□□□□ -0.81
Scn1b-203ENSMUST00000211945 Krtap3-3Q9D7P0 99 aa10.02□□□□□ -0.81
Scn1b-203ENSMUST00000211945 Hist1h4aP62806 103 aaKnown RBP10□□□□□ -0.81
Scn1b-203ENSMUST00000211945 Sec61bQ9CQS8 96 aaKnown RBP9.99□□□□□ -0.81
Scn1b-203ENSMUST00000211945 A0A286YE49 62 aa9.97□□□□□ -0.81
Scn1b-203ENSMUST00000211945 2310057N15RikQ9D6T8 200 aa9.91□□□□□ -0.82
Scn1b-203ENSMUST00000211945 Samd13D3YUG0 102 aa9.9□□□□□ -0.82
Scn1b-203ENSMUST00000211945 7530416G11RikJ3QJX6 159 aa9.9□□□□□ -0.82
Scn1b-203ENSMUST00000211945 Krtap1-3A2A588 173 aa9.89□□□□□ -0.83
Scn1b-203ENSMUST00000211945 Spink8Q09TK9 105 aa9.89□□□□□ -0.83
Scn1b-203ENSMUST00000211945 Fam229bQ8CF36 80 aa9.89□□□□□ -0.83
Scn1b-203ENSMUST00000211945 2310034C09RikQ9D746 214 aa9.87□□□□□ -0.83
Scn1b-203ENSMUST00000211945 Naa38Q9D2U5 125 aa9.86□□□□□ -0.83
Scn1b-203ENSMUST00000211945 ZanO88799 5376 aa9.82□□□□□ -0.84
Scn1b-203ENSMUST00000211945 Ndufc1Q9CQY9 76 aa9.82□□□□□ -0.84
Scn1b-203ENSMUST00000211945 Rnase13Q5GAM7 153 aa9.81□□□□□ -0.84
Scn1b-203ENSMUST00000211945 Apoc4Q61268 124 aa9.77□□□□□ -0.85
Scn1b-203ENSMUST00000211945 1700074P13RikQ9D9G7 251 aa9.76□□□□□ -0.85
Scn1b-203ENSMUST00000211945 Krtap17-1A2A5X6 109 aa9.72□□□□□ -0.85
Scn1b-203ENSMUST00000211945 Gm4491E0CX42 125 aa9.72□□□□□ -0.85
Scn1b-203ENSMUST00000211945 Pcp4P63054 62 aa9.72□□□□□ -0.85
Scn1b-203ENSMUST00000211945 Crct1Q6PAI5 102 aa9.7□□□□□ -0.86
Scn1b-203ENSMUST00000211945 Fat4Q2PZL6 4981 aa9.7□□□□□ -0.86
Scn1b-203ENSMUST00000211945 Gm17416Q30KP4 66 aa9.68□□□□□ -0.86
Scn1b-203ENSMUST00000211945 Prr13Q9CQJ5 137 aa9.68□□□□□ -0.86
Scn1b-203ENSMUST00000211945 Krtap16-3Q8C1I6 86 aa9.64□□□□□ -0.87
Scn1b-203ENSMUST00000211945 LorP18165 486 aa9.63□□□□□ -0.87
Scn1b-203ENSMUST00000211945 Gm28539A0A087WSL9 92 aa9.61□□□□□ -0.87
Scn1b-203ENSMUST00000211945 Krtap19-1Q925H2 87 aa9.61□□□□□ -0.87
Scn1b-203ENSMUST00000211945 Serp2Q6TAW2 65 aa9.61□□□□□ -0.87
Scn1b-203ENSMUST00000211945 4930518I15RikQ3V2W7 57 aa9.59□□□□□ -0.87
Scn1b-203ENSMUST00000211945 Krtap19-3Q925H6 87 aa9.58□□□□□ -0.88
Scn1b-203ENSMUST00000211945 Gm19402J3QJV4 266 aa9.57□□□□□ -0.88
Scn1b-203ENSMUST00000211945 Q8BGJ3 129 aa9.55□□□□□ -0.88
Scn1b-203ENSMUST00000211945 Rnf213E9Q555 5152 aaKnown RBP9.52□□□□□ -0.89
Scn1b-203ENSMUST00000211945 Gm10999F6Q4M4 69 aa9.51□□□□□ -0.89
Scn1b-203ENSMUST00000211945 9230102O04RikA2ASX7 82 aa9.51□□□□□ -0.89
Scn1b-203ENSMUST00000211945 Gm11562A0PK51 136 aa9.49□□□□□ -0.89
Scn1b-203ENSMUST00000211945 Fam229aB2KGE5 128 aa9.47□□□□□ -0.89
Scn1b-203ENSMUST00000211945 Atox1O08997 68 aaKnown RBP9.47□□□□□ -0.89
Scn1b-203ENSMUST00000211945 Chtf8P0CG14 533 aa9.47□□□□□ -0.89
Scn1b-203ENSMUST00000211945 SmcpP15265 143 aa9.44□□□□□ -0.9
Scn1b-203ENSMUST00000211945 Defb38Q7TNV7 63 aa9.44□□□□□ -0.9
Scn1b-203ENSMUST00000211945 2310079G19RikQ9D6L6 185 aa9.43□□□□□ -0.9
Scn1b-203ENSMUST00000211945 Gm21798J3QNU5 87 aa9.41□□□□□ -0.9
Scn1b-203ENSMUST00000211945 Spint4Q9D263 159 aa9.41□□□□□ -0.9
Scn1b-203ENSMUST00000211945 Gm10061D3Z714 54 aa9.41□□□□□ -0.9
Scn1b-203ENSMUST00000211945 Coa6Q8BGD8 79 aa9.41□□□□□ -0.9
Scn1b-203ENSMUST00000211945 Tmem258P61166 79 aa9.39□□□□□ -0.91
Scn1b-203ENSMUST00000211945 1700042G07RikB1AUF7 90 aa9.38□□□□□ -0.91
Scn1b-203ENSMUST00000211945 4930507D05RikQ8C9C9 103 aa9.38□□□□□ -0.91
Scn1b-203ENSMUST00000211945 Smim20D3Z7Q2 69 aa9.37□□□□□ -0.91
Scn1b-203ENSMUST00000211945 Gm10160F6Y577 67 aa9.37□□□□□ -0.91
Scn1b-203ENSMUST00000211945 Krtap1-4Q3V2D6 188 aa9.37□□□□□ -0.91
Scn1b-203ENSMUST00000211945 B230307C23RikQ8BLB2 64 aa9.36□□□□□ -0.91
Scn1b-203ENSMUST00000211945 Gm10318A0A1W2P728 225 aa9.36□□□□□ -0.91
Scn1b-203ENSMUST00000211945 Gm19935A0A1B0GSF9 52 aa9.35□□□□□ -0.91
Scn1b-203ENSMUST00000211945 2210017I01RikA0A0A6YVV1 95 aa9.34□□□□□ -0.91
Scn1b-203ENSMUST00000211945 Krtap13-1Q8K198 168 aa9.32□□□□□ -0.92
Scn1b-203ENSMUST00000211945 Smlr1J3QMJ4 66 aa9.29□□□□□ -0.92
Scn1b-203ENSMUST00000211945 Gm11569B1AQB1 180 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 76.7 ms