RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Gm35339A0A140LHH9 1649 aa41.64■■■■■ 4.26
Scn1b-203ENSMUST00000211945 NischQ80TM9 1593 aa41.23■■■■■ 4.19
Scn1b-203ENSMUST00000211945 Abcc9P70170 1546 aa39.98■■■■□ 3.99
Scn1b-203ENSMUST00000211945 Abcc8B2RUS7 1588 aa39.75■■■■□ 3.95
Scn1b-203ENSMUST00000211945 ScribQ80U72 1612 aa37.99■■■■□ 3.67
Scn1b-203ENSMUST00000211945 NacadQ5SWP3 1504 aa36.88■■■■□ 3.49
Scn1b-203ENSMUST00000211945 Kdm5dQ62240 1548 aa36.83■■■■□ 3.49
Scn1b-203ENSMUST00000211945 Dcaf1Q80TR8 1506 aa36.83■■■■□ 3.49
Scn1b-203ENSMUST00000211945 Sycp2Q9CUU3 1500 aa36.14■■■■□ 3.38
Scn1b-203ENSMUST00000211945 Rhox8Q6VSS7 320 aa35.94■■■■□ 3.34
Scn1b-203ENSMUST00000211945 Rb1cc1Q9ESK9 1588 aa35.94■■■■□ 3.34
Scn1b-203ENSMUST00000211945 Ccdc180J3QNE4 1664 aa35.71■■■■□ 3.31
Scn1b-203ENSMUST00000211945 BicraF8VPZ9 1578 aa35.55■■■■□ 3.28
Scn1b-203ENSMUST00000211945 Baz1aO88379 1555 aa35.53■■■■□ 3.28
Scn1b-203ENSMUST00000211945 Crybg2B7ZCC2 1516 aa35.44■■■■□ 3.26
Scn1b-203ENSMUST00000211945 Zcchc6Q5BLK4 1491 aaKnown RBP34.78■■■■□ 3.16
Scn1b-203ENSMUST00000211945 Dnajc5bQ9CQ94 199 aa34.69■■■■□ 3.14
Scn1b-203ENSMUST00000211945 Smarca2Q6DIC0 1577 aa34.56■■■■□ 3.12
Scn1b-203ENSMUST00000211945 Rtl1Q7M732 1744 aa34.43■■■■□ 3.1
Scn1b-203ENSMUST00000211945 Pds5bQ4VA53 1446 aaKnown RBP34.43■■■■□ 3.1
Scn1b-203ENSMUST00000211945 Atad2bE9Q166 1460 aaKnown RBP34.23■■■■□ 3.07
Scn1b-203ENSMUST00000211945 Cecr2E9Q2Z1 1453 aa34.18■■■■□ 3.06
Scn1b-203ENSMUST00000211945 Smarca4Q3TKT4 1613 aaKnown RBP34.12■■■■□ 3.05
Scn1b-203ENSMUST00000211945 Thoc2B1AZI6 1594 aaKnown RBP33.94■■■■□ 3.02
Scn1b-203ENSMUST00000211945 Iqgap2Q3UQ44 1575 aa33.85■■■■□ 3.01
Scn1b-203ENSMUST00000211945 Ercc6F8VPZ5 1481 aa33.63■■■□□ 2.97
Scn1b-203ENSMUST00000211945 Ccdc136Q3TVA9 1136 aa33.59■■■□□ 2.97
Scn1b-203ENSMUST00000211945 Brd4Q9ESU6 1400 aaKnown RBP33.57■■■□□ 2.97
Scn1b-203ENSMUST00000211945 CftrP26361 1476 aa33.54■■■□□ 2.96
Scn1b-203ENSMUST00000211945 Wdr62Q3U3T8 1523 aa33.5■■■□□ 2.95
Scn1b-203ENSMUST00000211945 Synj1Q8CHC4 1574 aa33.48■■■□□ 2.95
Scn1b-203ENSMUST00000211945 Cttnbp2B9EJA2 1648 aa33.47■■■□□ 2.95
Scn1b-203ENSMUST00000211945 Frmpd1A2AKB4 1549 aa33.46■■■□□ 2.95
Scn1b-203ENSMUST00000211945 Cc2d2aQ8CFW7 1633 aa33.39■■■□□ 2.94
Scn1b-203ENSMUST00000211945 Fam135aQ6NS59 1506 aa33.29■■■□□ 2.92
Scn1b-203ENSMUST00000211945 Trim41Q5NCC3 630 aa33.23■■■□□ 2.91
Scn1b-203ENSMUST00000211945 Phldb1Q6PDH0 1371 aaKnown RBP33.16■■■□□ 2.9
Scn1b-203ENSMUST00000211945 Unc13aQ4KUS2 1712 aa33.04■■■□□ 2.88
Scn1b-203ENSMUST00000211945 Baz1bQ9Z277 1479 aa33.01■■■□□ 2.88
Scn1b-203ENSMUST00000211945 Esf1Q3V1V3 845 aaKnown RBP32.81■■■□□ 2.84
Scn1b-203ENSMUST00000211945 Ubl4bQ9CQ84 188 aa32.75■■■□□ 2.83
Scn1b-203ENSMUST00000211945 Golga3P55937 1487 aa32.59■■■□□ 2.81
Scn1b-203ENSMUST00000211945 Top2bQ64511 1612 aa32.54■■■□□ 2.8
Scn1b-203ENSMUST00000211945 Rsf1E9PWW9 1441 aaKnown RBP32.5■■■□□ 2.79
Scn1b-203ENSMUST00000211945 Lamc3Q9R0B6 1581 aa32.46■■■□□ 2.79
Scn1b-203ENSMUST00000211945 Mrc2Q64449 1479 aa32.46■■■□□ 2.79
Scn1b-203ENSMUST00000211945 Kif15Q6P9L6 1387 aa32.37■■■□□ 2.77
Scn1b-203ENSMUST00000211945 TnnQ80Z71 1560 aa32.26■■■□□ 2.76
Scn1b-203ENSMUST00000211945 Cngb1E1AZ71 1325 aa32.26■■■□□ 2.76
Scn1b-203ENSMUST00000211945 Cux2P70298 1426 aa32.25■■■□□ 2.75
Scn1b-203ENSMUST00000211945 Fmn1Q05860 1466 aa32.12■■■□□ 2.73
Scn1b-203ENSMUST00000211945 Npm1Q61937 292 aaKnown RBP31.91■■■□□ 2.7
Scn1b-203ENSMUST00000211945 Ccdc18Q640L5 1455 aa31.89■■■□□ 2.7
Scn1b-203ENSMUST00000211945 Camsap1A2AHC3 1581 aa31.89■■■□□ 2.7
Scn1b-203ENSMUST00000211945 Cep164Q5DU05 1446 aa31.88■■■□□ 2.69
Scn1b-203ENSMUST00000211945 Kif21aQ9QXL2 1672 aa31.87■■■□□ 2.69
Scn1b-203ENSMUST00000211945 Ccdc88bQ4QRL3 1481 aa31.83■■■□□ 2.69
Scn1b-203ENSMUST00000211945 Lrriq1Q0P5X1 1673 aa31.71■■■□□ 2.67
Scn1b-203ENSMUST00000211945 LrpprcQ6PB66 1392 aaKnown RBP31.69■■■□□ 2.66
Scn1b-203ENSMUST00000211945 HrcG5E8J6 738 aa31.68■■■□□ 2.66
Scn1b-203ENSMUST00000211945 Il27Q8K3I6 234 aa31.66■■■□□ 2.66
Scn1b-203ENSMUST00000211945 Chic1Q8CBW7 227 aa31.65■■■□□ 2.66
Scn1b-203ENSMUST00000211945 Dnajc5P60904 198 aa31.62■■■□□ 2.65
Scn1b-203ENSMUST00000211945 Top2aQ01320 1528 aaKnown RBP31.62■■■□□ 2.65
Scn1b-203ENSMUST00000211945 Dhx29Q6PGC1 1365 aaKnown RBP31.62■■■□□ 2.65
Scn1b-203ENSMUST00000211945 PogzQ8BZH4 1409 aaKnown RBP31.56■■■□□ 2.64
Scn1b-203ENSMUST00000211945 Grin2bQ01097 1482 aa31.52■■■□□ 2.64
Scn1b-203ENSMUST00000211945 Crocc2F6XLV1 1638 aa31.47■■■□□ 2.63
Scn1b-203ENSMUST00000211945 Urb2E9Q7L1 1524 aaKnown RBP31.44■■■□□ 2.62
Scn1b-203ENSMUST00000211945 Plb1Q3TTY0 1478 aa31.41■■■□□ 2.62
Scn1b-203ENSMUST00000211945 Duox2A2AQ99 1517 aa31.41■■■□□ 2.62
Scn1b-203ENSMUST00000211945 NrkQ9R0G8 1455 aa31.36■■■□□ 2.61
Scn1b-203ENSMUST00000211945 Efcab5A0JP43 1406 aa31.34■■■□□ 2.61
Scn1b-203ENSMUST00000211945 Eif4g3Q80XI3 1579 aaKnown RBP31.28■■■□□ 2.6
Scn1b-203ENSMUST00000211945 Ift140E9PY46 1464 aa31.2■■■□□ 2.58
Scn1b-203ENSMUST00000211945 Shroom4Q1W617 1475 aa31.18■■■□□ 2.58
Scn1b-203ENSMUST00000211945 PtprkP35822 1457 aa31.16■■■□□ 2.58
Scn1b-203ENSMUST00000211945 Samd9lQ69Z37 1561 aa31.14■■■□□ 2.58
Scn1b-203ENSMUST00000211945 Disp1Q3TDN0 1521 aa31.08■■■□□ 2.57
Scn1b-203ENSMUST00000211945 Pbrm1Q8BSQ9 1634 aaKnown RBP30.98■■■□□ 2.55
Scn1b-203ENSMUST00000211945 Setd1bQ8CFT2 1985 aa30.98■■■□□ 2.55
Scn1b-203ENSMUST00000211945 Shroom2A2ALU4 1481 aa30.96■■■□□ 2.55
Scn1b-203ENSMUST00000211945 Nup160Q9Z0W3 1402 aaKnown RBP30.94■■■□□ 2.54
Scn1b-203ENSMUST00000211945 Rusc2Q80U22 1514 aa30.94■■■□□ 2.54
Scn1b-203ENSMUST00000211945 Rapgef2Q8CHG7 1496 aa30.9■■■□□ 2.54
Scn1b-203ENSMUST00000211945 Rad54l2Q99NG0 1466 aa30.9■■■□□ 2.54
Scn1b-203ENSMUST00000211945 Magi3Q9EQJ9 1476 aa30.87■■■□□ 2.53
Scn1b-203ENSMUST00000211945 SynmQ70IV5 1561 aa30.85■■■□□ 2.53
Scn1b-203ENSMUST00000211945 Cc2d2bA0A286YDU8 1405 aa30.84■■■□□ 2.53
Scn1b-203ENSMUST00000211945 Mroh2bQ7M6Y6 1581 aa30.82■■■□□ 2.52
Scn1b-203ENSMUST00000211945 Grin2aP35436 1464 aa30.82■■■□□ 2.52
Scn1b-203ENSMUST00000211945 Gab3Q8BSM5 595 aa30.81■■■□□ 2.52
Scn1b-203ENSMUST00000211945 Gpatch8A2A6A1 1505 aa30.81■■■□□ 2.52
Scn1b-203ENSMUST00000211945 Npm2Q80W85 207 aa30.75■■■□□ 2.51
Scn1b-203ENSMUST00000211945 Pla2r1Q62028 1487 aa30.73■■■□□ 2.51
Scn1b-203ENSMUST00000211945 Eif4g1Q6NZJ6 1600 aaKnown RBP30.73■■■□□ 2.51
Scn1b-203ENSMUST00000211945 Arhgap35Q91YM2 1499 aa30.69■■■□□ 2.5
Scn1b-203ENSMUST00000211945 Map3k1P53349 1493 aa30.69■■■□□ 2.5
Scn1b-203ENSMUST00000211945 Pabpn1Q8CCS6 302 aaKnown RBP30.68■■■□□ 2.5
Scn1b-203ENSMUST00000211945 Cep162Q6ZQ06 1403 aa30.66■■■□□ 2.5
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms