RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Defa21Q8C1P2 93 aa11.13□□□□□ -0.63
Lig3-209ENSMUST00000173009 A930033H14RikG5E8X6 103 aa11.12□□□□□ -0.63
Lig3-209ENSMUST00000173009 Reg3aO09037 175 aa11.12□□□□□ -0.63
Lig3-209ENSMUST00000173009 Gtf2h5Q8K2X8 71 aa11.12□□□□□ -0.63
Lig3-209ENSMUST00000173009 Ubl5Q9EPV8 73 aa11.12□□□□□ -0.63
Lig3-209ENSMUST00000173009 Cypt15B1AXS0 87 aa11.11□□□□□ -0.63
Lig3-209ENSMUST00000173009 Cystm1Q8K353 104 aa11.06□□□□□ -0.64
Lig3-209ENSMUST00000173009 Gm5767A0A0J9YTU8 78 aa11.05□□□□□ -0.64
Lig3-209ENSMUST00000173009 Gm11939A2A592 99 aa11.05□□□□□ -0.64
Lig3-209ENSMUST00000173009 Lyrm7Q9DA03 104 aa11.05□□□□□ -0.64
Lig3-209ENSMUST00000173009 Bud31Q6PGH1 103 aa10.98□□□□□ -0.65
Lig3-209ENSMUST00000173009 Igkv8-19A0A0G2JFN8 121 aa10.98□□□□□ -0.65
Lig3-209ENSMUST00000173009 Gm26620Q9CY65 116 aa10.95□□□□□ -0.66
Lig3-209ENSMUST00000173009 Cdip1Q9DB75 208 aa10.95□□□□□ -0.66
Lig3-209ENSMUST00000173009 Igkv3-3A0A140T8Q0 119 aa10.95□□□□□ -0.66
Lig3-209ENSMUST00000173009 Tmem254aP0DN89 123 aa10.9□□□□□ -0.66
Lig3-209ENSMUST00000173009 Tmem254bP0DN90 123 aa10.9□□□□□ -0.66
Lig3-209ENSMUST00000173009 Tmem254cP0DN91 123 aa10.9□□□□□ -0.66
Lig3-209ENSMUST00000173009 Trav3-1Q5R1I8 114 aa10.88□□□□□ -0.67
Lig3-209ENSMUST00000173009 Prm1P02319 51 aa10.87□□□□□ -0.67
Lig3-209ENSMUST00000173009 Prr15lQ8JZM2 100 aa10.86□□□□□ -0.67
Lig3-209ENSMUST00000173009 Gm9821Q8K076 103 aa10.85□□□□□ -0.67
Lig3-209ENSMUST00000173009 Defb13Q8R2I4 64 aa10.85□□□□□ -0.67
Lig3-209ENSMUST00000173009 Krtap15-1Q9QZU5 150 aa10.85□□□□□ -0.67
Lig3-209ENSMUST00000173009 BikO70337 150 aa10.84□□□□□ -0.67
Lig3-209ENSMUST00000173009 Fam240bJ3QMB3 78 aa10.83□□□□□ -0.68
Lig3-209ENSMUST00000173009 Gm10267M0QWD8 85 aa10.83□□□□□ -0.68
Lig3-209ENSMUST00000173009 Gm45213A0A0U1RNZ6 101 aa10.81□□□□□ -0.68
Lig3-209ENSMUST00000173009 Ush2AQ2QI47 5193 aa10.8□□□□□ -0.68
Lig3-209ENSMUST00000173009 Gm7735D3YX18 52 aa10.8□□□□□ -0.68
Lig3-209ENSMUST00000173009 Hist1h4aP62806 103 aaKnown RBP10.8□□□□□ -0.68
Lig3-209ENSMUST00000173009 Gm9789Q8BIG3 52 aa10.8□□□□□ -0.68
Lig3-209ENSMUST00000173009 BatfO35284 125 aa10.74□□□□□ -0.69
Lig3-209ENSMUST00000173009 A0A286YE49 62 aa10.68□□□□□ -0.7
Lig3-209ENSMUST00000173009 Scgb1b2O35176 93 aa10.68□□□□□ -0.7
Lig3-209ENSMUST00000173009 Samd13D3YUG0 102 aa10.67□□□□□ -0.7
Lig3-209ENSMUST00000173009 Rpl37Q9D823 97 aa10.67□□□□□ -0.7
Lig3-209ENSMUST00000173009 Spink8Q09TK9 105 aa10.67□□□□□ -0.7
Lig3-209ENSMUST00000173009 Fam229bQ8CF36 80 aa10.64□□□□□ -0.71
Lig3-209ENSMUST00000173009 2310057N15RikQ9D6T8 200 aa10.63□□□□□ -0.71
Lig3-209ENSMUST00000173009 Hmcn2A2AJ76 5100 aa10.63□□□□□ -0.71
Lig3-209ENSMUST00000173009 Naa38Q9D2U5 125 aa10.58□□□□□ -0.72
Lig3-209ENSMUST00000173009 Sec61bQ9CQS8 96 aaKnown RBP10.57□□□□□ -0.72
Lig3-209ENSMUST00000173009 Krtap3-2Q9D638 99 aa10.57□□□□□ -0.72
Lig3-209ENSMUST00000173009 Krtap3-3Q9D7P0 99 aa10.57□□□□□ -0.72
Lig3-209ENSMUST00000173009 2310034C09RikQ9D746 214 aa10.53□□□□□ -0.72
Lig3-209ENSMUST00000173009 Ubr4A2AN08 5180 aa10.51□□□□□ -0.73
Lig3-209ENSMUST00000173009 7530416G11RikJ3QJX6 159 aa10.51□□□□□ -0.73
Lig3-209ENSMUST00000173009 1700074P13RikQ9D9G7 251 aa10.49□□□□□ -0.73
Lig3-209ENSMUST00000173009 4932415D10RikA0A1W2P6U8 4986 aa10.47□□□□□ -0.73
Lig3-209ENSMUST00000173009 Rnase13Q5GAM7 153 aa10.46□□□□□ -0.74
Lig3-209ENSMUST00000173009 Ndufc1Q9CQY9 76 aa10.45□□□□□ -0.74
Lig3-209ENSMUST00000173009 Apoc4Q61268 124 aa10.42□□□□□ -0.74
Lig3-209ENSMUST00000173009 Atp5eP56382 52 aa10.39□□□□□ -0.75
Lig3-209ENSMUST00000173009 Gm4491E0CX42 125 aa10.39□□□□□ -0.75
Lig3-209ENSMUST00000173009 Krtap1-3A2A588 173 aa10.38□□□□□ -0.75
Lig3-209ENSMUST00000173009 Crct1Q6PAI5 102 aa10.37□□□□□ -0.75
Lig3-209ENSMUST00000173009 4930518I15RikQ3V2W7 57 aa10.27□□□□□ -0.77
Lig3-209ENSMUST00000173009 Defb38Q7TNV7 63 aa10.26□□□□□ -0.77
Lig3-209ENSMUST00000173009 Q8BGJ3 129 aa10.24□□□□□ -0.77
Lig3-209ENSMUST00000173009 Gm10999F6Q4M4 69 aa10.24□□□□□ -0.77
Lig3-209ENSMUST00000173009 Anapc13Q8R034 74 aa10.23□□□□□ -0.77
Lig3-209ENSMUST00000173009 Krtap16-3Q8C1I6 86 aa10.19□□□□□ -0.78
Lig3-209ENSMUST00000173009 Gm28539A0A087WSL9 92 aa10.18□□□□□ -0.78
Lig3-209ENSMUST00000173009 Gm17416Q30KP4 66 aa10.18□□□□□ -0.78
Lig3-209ENSMUST00000173009 Serp2Q6TAW2 65 aa10.16□□□□□ -0.78
Lig3-209ENSMUST00000173009 ZanO88799 5376 aa10.16□□□□□ -0.78
Lig3-209ENSMUST00000173009 Atox1O08997 68 aaKnown RBP10.14□□□□□ -0.79
Lig3-209ENSMUST00000173009 Chtf8P0CG14 533 aa10.14□□□□□ -0.79
Lig3-209ENSMUST00000173009 Krtap19-1Q925H2 87 aa10.14□□□□□ -0.79
Lig3-209ENSMUST00000173009 Gm10318A0A1W2P728 225 aa10.13□□□□□ -0.79
Lig3-209ENSMUST00000173009 Krtap19-3Q925H6 87 aa10.13□□□□□ -0.79
Lig3-209ENSMUST00000173009 B230307C23RikQ8BLB2 64 aa10.11□□□□□ -0.79
Lig3-209ENSMUST00000173009 LorP18165 486 aa10.09□□□□□ -0.79
Lig3-209ENSMUST00000173009 Gm21798J3QNU5 87 aa10.09□□□□□ -0.79
Lig3-209ENSMUST00000173009 Fam229aB2KGE5 128 aa10.06□□□□□ -0.8
Lig3-209ENSMUST00000173009 Coa6Q8BGD8 79 aa10.06□□□□□ -0.8
Lig3-209ENSMUST00000173009 Spint4Q9D263 159 aa10.05□□□□□ -0.8
Lig3-209ENSMUST00000173009 9230102O04RikA2ASX7 82 aa10.03□□□□□ -0.8
Lig3-209ENSMUST00000173009 Gm10160F6Y577 67 aa10.03□□□□□ -0.8
Lig3-209ENSMUST00000173009 Fat4Q2PZL6 4981 aa10□□□□□ -0.81
Lig3-209ENSMUST00000173009 4930507D05RikQ8C9C9 103 aa10□□□□□ -0.81
Lig3-209ENSMUST00000173009 2310079G19RikQ9D6L6 185 aa9.99□□□□□ -0.81
Lig3-209ENSMUST00000173009 Gm19402J3QJV4 266 aa9.93□□□□□ -0.82
Lig3-209ENSMUST00000173009 1700042G07RikB1AUF7 90 aa9.91□□□□□ -0.82
Lig3-209ENSMUST00000173009 Krtap13-1Q8K198 168 aa9.91□□□□□ -0.82
Lig3-209ENSMUST00000173009 Rnf213E9Q555 5152 aaKnown RBP9.86□□□□□ -0.83
Lig3-209ENSMUST00000173009 2210017I01RikA0A0A6YVV1 95 aa9.86□□□□□ -0.83
Lig3-209ENSMUST00000173009 Krtap1-4Q3V2D6 188 aa9.8□□□□□ -0.84
Lig3-209ENSMUST00000173009 Defb1P56386 69 aa9.8□□□□□ -0.84
Lig3-209ENSMUST00000173009 Gm10643Q3URG9 111 aa9.79□□□□□ -0.84
Lig3-209ENSMUST00000173009 Coa5Q99M07 74 aa9.79□□□□□ -0.84
Lig3-209ENSMUST00000173009 Krtap1-5A2A590 122 aa9.73□□□□□ -0.85
Lig3-209ENSMUST00000173009 Krtap3-1A2A591 98 aa9.63□□□□□ -0.87
Lig3-209ENSMUST00000173009 Prr13Q9CQJ5 137 aa9.63□□□□□ -0.87
Lig3-209ENSMUST00000173009 Gm10061D3Z714 54 aa9.61□□□□□ -0.87
Lig3-209ENSMUST00000173009 Smlr1J3QMJ4 66 aa9.6□□□□□ -0.87
Lig3-209ENSMUST00000173009 Cox6b2Q80ZN9 88 aa9.58□□□□□ -0.88
Lig3-209ENSMUST00000173009 SnurfQ9WU12 71 aa9.57□□□□□ -0.88
Lig3-209ENSMUST00000173009 SptssbQ925E8 76 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 74.3 ms