RNA–Protein interactions for RNA: ENSMUST00000172775.3

Msx3-202, Transcript of Homeobox protein MSX-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx3, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-202ENSMUST00000172775 Mrpl55Q9CZ83 127 aa12.26□□□□□ -0.45
Msx3-202ENSMUST00000172775 Igkv3-3A0A140T8Q0 119 aa12.24□□□□□ -0.45
Msx3-202ENSMUST00000172775 Gm19935A0A1B0GSF9 52 aa12.22□□□□□ -0.45
Msx3-202ENSMUST00000172775 Dph3Q8K0W9 82 aa12.22□□□□□ -0.45
Msx3-202ENSMUST00000172775 Stard9Q80TF6 4561 aa12.21□□□□□ -0.45
Msx3-202ENSMUST00000172775 Smim20D3Z7Q2 69 aa12.2□□□□□ -0.46
Msx3-202ENSMUST00000172775 Smlr1J3QMJ4 66 aa12.2□□□□□ -0.46
Msx3-202ENSMUST00000172775 Lrp1bQ9JI18 4599 aa12.19□□□□□ -0.46
Msx3-202ENSMUST00000172775 Spaca4Q80ZQ0 127 aa12.19□□□□□ -0.46
Msx3-202ENSMUST00000172775 Fat1A0A1L1SQU7 4645 aa12.19□□□□□ -0.46
Msx3-202ENSMUST00000172775 Pkhd1E9PZ36 4059 aa12.18□□□□□ -0.46
Msx3-202ENSMUST00000172775 Coa6Q8BGD8 79 aa12.17□□□□□ -0.46
Msx3-202ENSMUST00000172775 1700074P13RikQ9D9G7 251 aa12.16□□□□□ -0.46
Msx3-202ENSMUST00000172775 Atox1O08997 68 aaKnown RBP12.15□□□□□ -0.46
Msx3-202ENSMUST00000172775 Ryr3A2AGL3 4863 aa12.13□□□□□ -0.47
Msx3-202ENSMUST00000172775 Spint4Q9D263 159 aa12.1□□□□□ -0.47
Msx3-202ENSMUST00000172775 Cypt15B1AXS0 87 aa12.09□□□□□ -0.47
Msx3-202ENSMUST00000172775 Defb12Q8K4N3 78 aa12.09□□□□□ -0.47
Msx3-202ENSMUST00000172775 RetnlbQ99P86 105 aa12.06□□□□□ -0.48
Msx3-202ENSMUST00000172775 Pet100P0DJE0 76 aa12.05□□□□□ -0.48
Msx3-202ENSMUST00000172775 Rps28P62858 69 aaKnown RBP12.05□□□□□ -0.48
Msx3-202ENSMUST00000172775 Gm10267M0QWD8 85 aa12□□□□□ -0.49
Msx3-202ENSMUST00000172775 SnurfQ9WU12 71 aa11.99□□□□□ -0.49
Msx3-202ENSMUST00000172775 Defb13Q8R2I4 64 aa11.98□□□□□ -0.49
Msx3-202ENSMUST00000172775 Ryr2E9Q401 4966 aaKnown RBP11.97□□□□□ -0.49
Msx3-202ENSMUST00000172775 Fat2Q5F226 4351 aa11.95□□□□□ -0.5
Msx3-202ENSMUST00000172775 Rps29P62274 56 aa11.92□□□□□ -0.5
Msx3-202ENSMUST00000172775 Serp1Q9Z1W5 66 aa11.91□□□□□ -0.5
Msx3-202ENSMUST00000172775 SacsQ9JLC8 4582 aa11.91□□□□□ -0.5
Msx3-202ENSMUST00000172775 Chtf8P0CG14 533 aa11.88□□□□□ -0.51
Msx3-202ENSMUST00000172775 Coa5Q99M07 74 aa11.88□□□□□ -0.51
Msx3-202ENSMUST00000172775 Brk1Q91VR8 75 aa11.86□□□□□ -0.51
Msx3-202ENSMUST00000172775 Pkhd1l1Q80ZA4 4249 aa11.83□□□□□ -0.52
Msx3-202ENSMUST00000172775 Gm10160F6Y577 67 aa11.8□□□□□ -0.52
Msx3-202ENSMUST00000172775 Cdc42se1Q8BHL7 80 aa11.77□□□□□ -0.53
Msx3-202ENSMUST00000172775 Vps13bQ80TY5 3993 aa11.76□□□□□ -0.53
Msx3-202ENSMUST00000172775 Krtap19-5O08632 62 aa11.72□□□□□ -0.53
Msx3-202ENSMUST00000172775 Gm26620Q9CY65 116 aa11.72□□□□□ -0.53
Msx3-202ENSMUST00000172775 Defb38Q7TNV7 63 aa11.69□□□□□ -0.54
Msx3-202ENSMUST00000172775 Ryr1E9PZQ0 5035 aa11.66□□□□□ -0.54
Msx3-202ENSMUST00000172775 Kmt2cQ8BRH4 4903 aa11.64□□□□□ -0.55
Msx3-202ENSMUST00000172775 Gm10643Q3URG9 111 aa11.64□□□□□ -0.55
Msx3-202ENSMUST00000172775 Gm10197F6QEY5 67 aa11.61□□□□□ -0.55
Msx3-202ENSMUST00000172775 A530084C06RikQ3UTW2 186 aa11.61□□□□□ -0.55
Msx3-202ENSMUST00000172775 Gm11939A2A592 99 aa11.58□□□□□ -0.56
Msx3-202ENSMUST00000172775 Gm21798J3QNU5 87 aa11.55□□□□□ -0.56
Msx3-202ENSMUST00000172775 H2al1aQ5M8Q2 105 aa11.55□□□□□ -0.56
Msx3-202ENSMUST00000172775 Dnah8Q91XQ0 4731 aa11.53□□□□□ -0.56
Msx3-202ENSMUST00000172775 Krtap3-2Q9D638 99 aa11.53□□□□□ -0.56
Msx3-202ENSMUST00000172775 Krtap3-3Q9D7P0 99 aa11.53□□□□□ -0.56
Msx3-202ENSMUST00000172775 Lrp1Q91ZX7 4545 aaKnown RBP11.53□□□□□ -0.56
Msx3-202ENSMUST00000172775 D6Ertd527eA0A0N4SWI3 464 aa11.51□□□□□ -0.57
Msx3-202ENSMUST00000172775 Gm10999F6Q4M4 69 aa11.5□□□□□ -0.57
Msx3-202ENSMUST00000172775 Fat3Q8BNA6 4555 aa11.46□□□□□ -0.57
Msx3-202ENSMUST00000172775 Phxr4P15974 95 aa11.45□□□□□ -0.58
Msx3-202ENSMUST00000172775 Q8BGJ3 129 aa11.45□□□□□ -0.58
Msx3-202ENSMUST00000172775 Gm5767A0A0J9YTU8 78 aa11.4□□□□□ -0.58
Msx3-202ENSMUST00000172775 A930033H14RikG5E8X6 103 aa11.39□□□□□ -0.59
Msx3-202ENSMUST00000172775 2310034C09RikQ9D746 214 aa11.39□□□□□ -0.59
Msx3-202ENSMUST00000172775 Gm20661K7N787 53 aa11.36□□□□□ -0.59
Msx3-202ENSMUST00000172775 Gm4491E0CX42 125 aa11.34□□□□□ -0.59
Msx3-202ENSMUST00000172775 H2al1eQ810S6 105 aa11.34□□□□□ -0.59
Msx3-202ENSMUST00000172775 Gm9736A0A1W2P7N1 277 aa11.32□□□□□ -0.6
Msx3-202ENSMUST00000172775 4930507D05RikQ8C9C9 103 aa11.31□□□□□ -0.6
Msx3-202ENSMUST00000172775 SvipQ3UZP4 77 aa11.31□□□□□ -0.6
Msx3-202ENSMUST00000172775 2310079G19RikQ9D6L6 185 aa11.3□□□□□ -0.6
Msx3-202ENSMUST00000172775 Abca13Q5SSE9 5034 aa11.27□□□□□ -0.61
Msx3-202ENSMUST00000172775 H2al1bA0A087WP11 105 aa11.21□□□□□ -0.61
Msx3-202ENSMUST00000172775 Gm5965D3Z724 196 aa11.2□□□□□ -0.62
Msx3-202ENSMUST00000172775 Dnhd1D3Z2X2 4750 aa11.18□□□□□ -0.62
Msx3-202ENSMUST00000172775 Ndufb1P0DN34 57 aa11.16□□□□□ -0.62
Msx3-202ENSMUST00000172775 SptssbQ925E8 76 aa11.15□□□□□ -0.62
Msx3-202ENSMUST00000172775 Gm10337F7DEP7 55 aa11.15□□□□□ -0.63
Msx3-202ENSMUST00000172775 Uqcr11Q9CPX8 56 aa11.13□□□□□ -0.63
Msx3-202ENSMUST00000172775 Limd2Q8BGB5 128 aa11.13□□□□□ -0.63
Msx3-202ENSMUST00000172775 Mycbp2Q7TPH6 4711 aa11.12□□□□□ -0.63
Msx3-202ENSMUST00000172775 9230102O04RikA2ASX7 82 aa11.11□□□□□ -0.63
Msx3-202ENSMUST00000172775 Sox16Q62247 57 aa11.1□□□□□ -0.63
Msx3-202ENSMUST00000172775 Herc2Q4U2R1 4836 aa11.1□□□□□ -0.63
Msx3-202ENSMUST00000172775 Rpl37Q9D823 97 aa11.09□□□□□ -0.63
Msx3-202ENSMUST00000172775 Krtap15-1Q9QZU5 150 aa11.07□□□□□ -0.64
Msx3-202ENSMUST00000172775 H2al1kJ3QP08 105 aa11.06□□□□□ -0.64
Msx3-202ENSMUST00000172775 Defb1P56386 69 aa11.06□□□□□ -0.64
Msx3-202ENSMUST00000172775 H2al1mQ9DAD9 105 aa11.06□□□□□ -0.64
Msx3-202ENSMUST00000172775 Birc6O88738 4882 aa11.06□□□□□ -0.64
Msx3-202ENSMUST00000172775 Rnase13Q5GAM7 153 aa11.04□□□□□ -0.64
Msx3-202ENSMUST00000172775 Kiaa1109A2AAE1 5005 aa11.04□□□□□ -0.64
Msx3-202ENSMUST00000172775 Krtap4-1Q3UUY3 169 aa11.03□□□□□ -0.64
Msx3-202ENSMUST00000172775 Gm9821Q8K076 103 aa11□□□□□ -0.65
Msx3-202ENSMUST00000172775 4933415A04RikQ9D443 101 aa10.94□□□□□ -0.66
Msx3-202ENSMUST00000172775 Gm17416Q30KP4 66 aa10.83□□□□□ -0.68
Msx3-202ENSMUST00000172775 Cox6b2Q80ZN9 88 aa10.82□□□□□ -0.68
Msx3-202ENSMUST00000172775 HydinQ80W93 5154 aa10.78□□□□□ -0.68
Msx3-202ENSMUST00000172775 Sec61gP60060 68 aa10.69□□□□□ -0.7
Msx3-202ENSMUST00000172775 Lrp2A2ARV4 4660 aa10.61□□□□□ -0.71
Msx3-202ENSMUST00000172775 Sec61bQ9CQS8 96 aaKnown RBP10.6□□□□□ -0.71
Msx3-202ENSMUST00000172775 Gm17606F6ZL36 78 aa10.57□□□□□ -0.72
Msx3-202ENSMUST00000172775 2210017I01RikA0A0A6YVV1 95 aa10.51□□□□□ -0.73
Msx3-202ENSMUST00000172775 Gm3646F6S692 53 aa10.47□□□□□ -0.73
Msx3-202ENSMUST00000172775 PcloQ9QYX7 5068 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms