RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Anapc11Q9CPX9 84 aa9.37□□□□□ -0.91
Sdc1-205ENSMUST00000171158 H2al1bA0A087WP11 105 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 H2al1kJ3QP08 105 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Tnp2P11378 117 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 H2al1eQ810S6 105 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 H2al1mQ9DAD9 105 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 1600014C23RikQ9DAX4 101 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 2310050C09RikG5E8Z3 280 aa9.36□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Gm16253D3Z167 63 aa9.35□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Defb39Q70KL3 74 aa9.35□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Gpr15lA0A0B4J1N3 78 aa9.34□□□□□ -0.91
Sdc1-205ENSMUST00000171158 Igkv3-3A0A140T8Q0 119 aa9.33□□□□□ -0.92
Sdc1-205ENSMUST00000171158 Dnah5Q8VHE6 4621 aa9.31□□□□□ -0.92
Sdc1-205ENSMUST00000171158 Krtap14O08640 167 aa9.31□□□□□ -0.92
Sdc1-205ENSMUST00000171158 Defb11Q8R2I7 77 aa9.3□□□□□ -0.92
Sdc1-205ENSMUST00000171158 Dnah7cA0A087WR13 4024 aa9.3□□□□□ -0.92
Sdc1-205ENSMUST00000171158 Ly6g6cQ9Z1Q4 126 aa9.3□□□□□ -0.92
Sdc1-205ENSMUST00000171158 Gm10160F6Y577 67 aa9.26□□□□□ -0.93
Sdc1-205ENSMUST00000171158 Phxr4P15974 95 aa9.26□□□□□ -0.93
Sdc1-205ENSMUST00000171158 Bean1Q9EQG5 255 aa9.24□□□□□ -0.93
Sdc1-205ENSMUST00000171158 Hectd4E9Q2E4 4418 aa9.23□□□□□ -0.93
Sdc1-205ENSMUST00000171158 Krtap10-4Q08EG8 221 aa9.23□□□□□ -0.93
Sdc1-205ENSMUST00000171158 Dnah7aE9Q0T8 4024 aa9.21□□□□□ -0.94
Sdc1-205ENSMUST00000171158 Defb38Q7TNV7 63 aa9.19□□□□□ -0.94
Sdc1-205ENSMUST00000171158 Dnah2P0C6F1 4456 aa9.17□□□□□ -0.94
Sdc1-205ENSMUST00000171158 Vps13dB1ART2 4390 aa9.15□□□□□ -0.94
Sdc1-205ENSMUST00000171158 Pkd1O08852 4293 aa9.11□□□□□ -0.95
Sdc1-205ENSMUST00000171158 Cypt15B1AXS0 87 aa9.11□□□□□ -0.95
Sdc1-205ENSMUST00000171158 4933415A04RikQ9D443 101 aa9.11□□□□□ -0.95
Sdc1-205ENSMUST00000171158 ApobE9Q414 4505 aa9.11□□□□□ -0.95
Sdc1-205ENSMUST00000171158 Sox16Q62247 57 aa9.09□□□□□ -0.95
Sdc1-205ENSMUST00000171158 Spaca4Q80ZQ0 127 aa9.09□□□□□ -0.95
Sdc1-205ENSMUST00000171158 Gm20661K7N787 53 aa9.08□□□□□ -0.96
Sdc1-205ENSMUST00000171158 Defb13Q8R2I4 64 aa9.08□□□□□ -0.96
Sdc1-205ENSMUST00000171158 Krtap13O88375 197 aa9.07□□□□□ -0.96
Sdc1-205ENSMUST00000171158 Stard9Q80TF6 4561 aa9.06□□□□□ -0.96
Sdc1-205ENSMUST00000171158 Gm21798J3QNU5 87 aa9.04□□□□□ -0.96
Sdc1-205ENSMUST00000171158 Gm10643Q3URG9 111 aa9.04□□□□□ -0.96
Sdc1-205ENSMUST00000171158 Lrp1bQ9JI18 4599 aa9□□□□□ -0.97
Sdc1-205ENSMUST00000171158 Wfdc3Q14AE4 130 aa8.94□□□□□ -0.98
Sdc1-205ENSMUST00000171158 Gm2696A0A1W2P709 240 aa8.92□□□□□ -0.98
Sdc1-205ENSMUST00000171158 Pkhd1E9PZ36 4059 aa8.92□□□□□ -0.98
Sdc1-205ENSMUST00000171158 Ndufb1P0DN34 57 aa8.92□□□□□ -0.98
Sdc1-205ENSMUST00000171158 SptssbQ925E8 76 aa8.9□□□□□ -0.98
Sdc1-205ENSMUST00000171158 Gm10999F6Q4M4 69 aa8.86□□□□□ -0.99
Sdc1-205ENSMUST00000171158 OxtP35454 125 aa8.85□□□□□ -0.99
Sdc1-205ENSMUST00000171158 Limd2Q8BGB5 128 aa8.83□□□□□ -1
Sdc1-205ENSMUST00000171158 Uqcr11Q9CPX8 56 aa8.83□□□□□ -1
Sdc1-205ENSMUST00000171158 Fat2Q5F226 4351 aa8.81□□□□□ -1
Sdc1-205ENSMUST00000171158 Q8BGJ3 129 aa8.8□□□□□ -1
Sdc1-205ENSMUST00000171158 2310034C09RikQ9D746 214 aa8.79□□□□□ -1
Sdc1-205ENSMUST00000171158 Krtap3-2Q9D638 99 aa8.79□□□□□ -1
Sdc1-205ENSMUST00000171158 Krtap3-3Q9D7P0 99 aa8.79□□□□□ -1
Sdc1-205ENSMUST00000171158 Fat1A0A1L1SQU7 4645 aa8.78□□□□□ -1
Sdc1-205ENSMUST00000171158 SacsQ9JLC8 4582 aa8.77□□□□□ -1.01
Sdc1-205ENSMUST00000171158 2310079G19RikQ9D6L6 185 aa8.77□□□□□ -1.01
Sdc1-205ENSMUST00000171158 Dync1h1Q9JHU4 4644 aaKnown RBP8.75□□□□□ -1.01
Sdc1-205ENSMUST00000171158 Gm3646F6S692 53 aa8.73□□□□□ -1.01
Sdc1-205ENSMUST00000171158 A930033H14RikG5E8X6 103 aa8.71□□□□□ -1.02
Sdc1-205ENSMUST00000171158 Rps29P62274 56 aa8.69□□□□□ -1.02
Sdc1-205ENSMUST00000171158 Gm26620Q9CY65 116 aa8.68□□□□□ -1.02
Sdc1-205ENSMUST00000171158 RetnlbQ99P86 105 aa8.66□□□□□ -1.02
Sdc1-205ENSMUST00000171158 Defb1P56386 69 aa8.65□□□□□ -1.03
Sdc1-205ENSMUST00000171158 4930507D05RikQ8C9C9 103 aa8.62□□□□□ -1.03
Sdc1-205ENSMUST00000171158 Gm11939A2A592 99 aa8.62□□□□□ -1.03
Sdc1-205ENSMUST00000171158 Gm4491E0CX42 125 aa8.6□□□□□ -1.03
Sdc1-205ENSMUST00000171158 1700042G07RikB1AUF7 90 aa8.59□□□□□ -1.03
Sdc1-205ENSMUST00000171158 D6Ertd527eA0A0N4SWI3 464 aa8.57□□□□□ -1.04
Sdc1-205ENSMUST00000171158 9230102O04RikA2ASX7 82 aa8.55□□□□□ -1.04
Sdc1-205ENSMUST00000171158 Ryr3A2AGL3 4863 aa8.52□□□□□ -1.04
Sdc1-205ENSMUST00000171158 Pkhd1l1Q80ZA4 4249 aa8.49□□□□□ -1.05
Sdc1-205ENSMUST00000171158 Ndufs5Q99LY9 106 aa8.48□□□□□ -1.05
Sdc1-205ENSMUST00000171158 Ryr1E9PZQ0 5035 aa8.47□□□□□ -1.05
Sdc1-205ENSMUST00000171158 Vps13bQ80TY5 3993 aa8.45□□□□□ -1.06
Sdc1-205ENSMUST00000171158 Ryr2E9Q401 4966 aaKnown RBP8.39□□□□□ -1.07
Sdc1-205ENSMUST00000171158 Lrp1Q91ZX7 4545 aaKnown RBP8.38□□□□□ -1.07
Sdc1-205ENSMUST00000171158 Gm5767A0A0J9YTU8 78 aa8.36□□□□□ -1.07
Sdc1-205ENSMUST00000171158 Krtap19-5O08632 62 aa8.32□□□□□ -1.08
Sdc1-205ENSMUST00000171158 Cox6b2Q80ZN9 88 aa8.31□□□□□ -1.08
Sdc1-205ENSMUST00000171158 Kmt2cQ8BRH4 4903 aa8.28□□□□□ -1.08
Sdc1-205ENSMUST00000171158 Fat3Q8BNA6 4555 aa8.24□□□□□ -1.09
Sdc1-205ENSMUST00000171158 Gm9736A0A1W2P7N1 277 aa8.23□□□□□ -1.09
Sdc1-205ENSMUST00000171158 Pla2g10Q9QXX3 151 aa8.21□□□□□ -1.09
Sdc1-205ENSMUST00000171158 Gm9821Q8K076 103 aa8.18□□□□□ -1.1
Sdc1-205ENSMUST00000171158 Gm20537G3UYK7 97 aa8.18□□□□□ -1.1
Sdc1-205ENSMUST00000171158 Gm5965D3Z724 196 aa8.14□□□□□ -1.11
Sdc1-205ENSMUST00000171158 Rnase13Q5GAM7 153 aa8.12□□□□□ -1.11
Sdc1-205ENSMUST00000171158 Rpl37Q9D823 97 aa8.12□□□□□ -1.11
Sdc1-205ENSMUST00000171158 Dnah8Q91XQ0 4731 aa8.12□□□□□ -1.11
Sdc1-205ENSMUST00000171158 Krtap15-1Q9QZU5 150 aa8.11□□□□□ -1.11
Sdc1-205ENSMUST00000171158 Mycbp2Q7TPH6 4711 aa8.1□□□□□ -1.11
Sdc1-205ENSMUST00000171158 Abca13Q5SSE9 5034 aa8.05□□□□□ -1.12
Sdc1-205ENSMUST00000171158 Gm3880A0A1B0GSB3 72 aa8.03□□□□□ -1.12
Sdc1-205ENSMUST00000171158 Gm10382Q3V0T5 144 aa8.03□□□□□ -1.12
Sdc1-205ENSMUST00000171158 Gm9955Q8CEJ8 102 aa8.01□□□□□ -1.13
Sdc1-205ENSMUST00000171158 Gm17606F6ZL36 78 aa8□□□□□ -1.13
Sdc1-205ENSMUST00000171158 Gm12216A0A1W2P827 62 aa7.98□□□□□ -1.13
Sdc1-205ENSMUST00000171158 Gm17416Q30KP4 66 aa7.98□□□□□ -1.13
Sdc1-205ENSMUST00000171158 Gm20538F6Z9R1 75 aa7.92□□□□□ -1.14
Sdc1-205ENSMUST00000171158 Krtap3-1A2A591 98 aa7.9□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms