RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 NischQ80TM9 1593 aa30.51■■■□□ 2.47
Sdc1-205ENSMUST00000171158 Gm35339A0A140LHH9 1649 aa30.11■■■□□ 2.41
Sdc1-205ENSMUST00000171158 Abcc9P70170 1546 aa29.69■■■□□ 2.34
Sdc1-205ENSMUST00000171158 Abcc8B2RUS7 1588 aa28.99■■■□□ 2.23
Sdc1-205ENSMUST00000171158 Rhox8Q6VSS7 320 aa28.09■■■□□ 2.09
Sdc1-205ENSMUST00000171158 Rtl1Q7M732 1744 aa28.03■■■□□ 2.08
Sdc1-205ENSMUST00000171158 Ccdc180J3QNE4 1664 aa27.45■■□□□ 1.99
Sdc1-205ENSMUST00000171158 Dcaf1Q80TR8 1506 aa27.1■■□□□ 1.93
Sdc1-205ENSMUST00000171158 ScribQ80U72 1612 aa27.05■■□□□ 1.92
Sdc1-205ENSMUST00000171158 Zcchc6Q5BLK4 1491 aaKnown RBP26.99■■□□□ 1.91
Sdc1-205ENSMUST00000171158 Rb1cc1Q9ESK9 1588 aa26.76■■□□□ 1.87
Sdc1-205ENSMUST00000171158 Kdm5dQ62240 1548 aa26.52■■□□□ 1.84
Sdc1-205ENSMUST00000171158 Baz1aO88379 1555 aa26.46■■□□□ 1.83
Sdc1-205ENSMUST00000171158 NacadQ5SWP3 1504 aa26.28■■□□□ 1.8
Sdc1-205ENSMUST00000171158 HrcG5E8J6 738 aa26.05■■□□□ 1.76
Sdc1-205ENSMUST00000171158 Ccdc136Q3TVA9 1136 aa26.05■■□□□ 1.76
Sdc1-205ENSMUST00000171158 Crybg2B7ZCC2 1516 aa25.96■■□□□ 1.75
Sdc1-205ENSMUST00000171158 Smarca2Q6DIC0 1577 aa25.89■■□□□ 1.73
Sdc1-205ENSMUST00000171158 Rpgrip1Q9EPQ2 1331 aa25.82■■□□□ 1.72
Sdc1-205ENSMUST00000171158 Sycp2Q9CUU3 1500 aa25.72■■□□□ 1.71
Sdc1-205ENSMUST00000171158 Trim41Q5NCC3 630 aa25.55■■□□□ 1.68
Sdc1-205ENSMUST00000171158 Acin1Q9JIX8 1338 aaKnown RBP25.47■■□□□ 1.67
Sdc1-205ENSMUST00000171158 Cep164Q5DU05 1446 aa25.35■■□□□ 1.65
Sdc1-205ENSMUST00000171158 Ehmt2Q9Z148 1263 aaKnown RBP25.28■■□□□ 1.64
Sdc1-205ENSMUST00000171158 Brd4Q9ESU6 1400 aaKnown RBP25.19■■□□□ 1.62
Sdc1-205ENSMUST00000171158 Cecr2E9Q2Z1 1453 aa25.17■■□□□ 1.62
Sdc1-205ENSMUST00000171158 BicraF8VPZ9 1578 aa25.16■■□□□ 1.62
Sdc1-205ENSMUST00000171158 Synj1Q8CHC4 1574 aa25.02■■□□□ 1.6
Sdc1-205ENSMUST00000171158 Rsf1E9PWW9 1441 aaKnown RBP25■■□□□ 1.59
Sdc1-205ENSMUST00000171158 Golga3P55937 1487 aa24.96■■□□□ 1.59
Sdc1-205ENSMUST00000171158 Cngb1E1AZ71 1325 aa24.93■■□□□ 1.58
Sdc1-205ENSMUST00000171158 Chic1Q8CBW7 227 aa24.89■■□□□ 1.57
Sdc1-205ENSMUST00000171158 CftrP26361 1476 aa24.84■■□□□ 1.57
Sdc1-205ENSMUST00000171158 Ccdc88bQ4QRL3 1481 aa24.83■■□□□ 1.57
Sdc1-205ENSMUST00000171158 Cttnbp2B9EJA2 1648 aa24.75■■□□□ 1.55
Sdc1-205ENSMUST00000171158 Top2bQ64511 1612 aa24.75■■□□□ 1.55
Sdc1-205ENSMUST00000171158 Smarca4Q3TKT4 1613 aaKnown RBP24.63■■□□□ 1.53
Sdc1-205ENSMUST00000171158 Gab3Q8BSM5 595 aa24.62■■□□□ 1.53
Sdc1-205ENSMUST00000171158 Esf1Q3V1V3 845 aaKnown RBP24.53■■□□□ 1.52
Sdc1-205ENSMUST00000171158 Cc2d2aQ8CFW7 1633 aa24.48■■□□□ 1.51
Sdc1-205ENSMUST00000171158 Pcgf6Q99NA9 353 aa24.33■■□□□ 1.49
Sdc1-205ENSMUST00000171158 Fmn1Q05860 1466 aa24.3■■□□□ 1.48
Sdc1-205ENSMUST00000171158 Iqgap2Q3UQ44 1575 aa24.28■■□□□ 1.48
Sdc1-205ENSMUST00000171158 Top2aQ01320 1528 aaKnown RBP24.24■■□□□ 1.47
Sdc1-205ENSMUST00000171158 Rapgef2Q8CHG7 1496 aa24.22■■□□□ 1.47
Sdc1-205ENSMUST00000171158 Atad2bE9Q166 1460 aaKnown RBP24.11■■□□□ 1.45
Sdc1-205ENSMUST00000171158 Mier1Q5UAK0 511 aa24.05■■□□□ 1.44
Sdc1-205ENSMUST00000171158 NefmP08553 848 aa24■■□□□ 1.43
Sdc1-205ENSMUST00000171158 Supt5hO55201 1082 aaKnown RBP23.99■■□□□ 1.43
Sdc1-205ENSMUST00000171158 Cep162Q6ZQ06 1403 aa23.98■■□□□ 1.43
Sdc1-205ENSMUST00000171158 Pds5bQ4VA53 1446 aaKnown RBP23.96■■□□□ 1.43
Sdc1-205ENSMUST00000171158 TnnQ80Z71 1560 aa23.96■■□□□ 1.43
Sdc1-205ENSMUST00000171158 Eif4g1Q6NZJ6 1600 aaKnown RBP23.9■■□□□ 1.42
Sdc1-205ENSMUST00000171158 Wdr62Q3U3T8 1523 aa23.8■■□□□ 1.4
Sdc1-205ENSMUST00000171158 Frmpd1A2AKB4 1549 aa23.78■■□□□ 1.4
Sdc1-205ENSMUST00000171158 Zeb1Q64318 1117 aa23.75■■□□□ 1.39
Sdc1-205ENSMUST00000171158 Myt1lP97500 1187 aa23.72■■□□□ 1.39
Sdc1-205ENSMUST00000171158 UbtfP25976 765 aaKnown RBP23.7■■□□□ 1.38
Sdc1-205ENSMUST00000171158 Lamc3Q9R0B6 1581 aa23.7■■□□□ 1.38
Sdc1-205ENSMUST00000171158 Npm2Q80W85 207 aa23.7■■□□□ 1.38
Sdc1-205ENSMUST00000171158 Unc13aQ4KUS2 1712 aa23.61■■□□□ 1.37
Sdc1-205ENSMUST00000171158 Arhgap35Q91YM2 1499 aa23.6■■□□□ 1.37
Sdc1-205ENSMUST00000171158 NrkQ9R0G8 1455 aa23.59■■□□□ 1.37
Sdc1-205ENSMUST00000171158 Clip1Q922J3 1391 aa23.58■■□□□ 1.37
Sdc1-205ENSMUST00000171158 PtprkP35822 1457 aa23.56■■□□□ 1.36
Sdc1-205ENSMUST00000171158 Ercc6F8VPZ5 1481 aa23.55■■□□□ 1.36
Sdc1-205ENSMUST00000171158 Camsap1A2AHC3 1581 aa23.51■■□□□ 1.35
Sdc1-205ENSMUST00000171158 Kif15Q6P9L6 1387 aa23.49■■□□□ 1.35
Sdc1-205ENSMUST00000171158 Shroom4Q1W617 1475 aa23.47■■□□□ 1.35
Sdc1-205ENSMUST00000171158 Sall2Q9QX96 1004 aa23.45■■□□□ 1.35
Sdc1-205ENSMUST00000171158 Map3k1P53349 1493 aa23.41■■□□□ 1.34
Sdc1-205ENSMUST00000171158 Plekhg3Q4VAC9 1341 aa23.41■■□□□ 1.34
Sdc1-205ENSMUST00000171158 Ncapd3Q6ZQK0 1506 aa23.4■■□□□ 1.34
Sdc1-205ENSMUST00000171158 Arap1Q4LDD4 1452 aa23.39■■□□□ 1.33
Sdc1-205ENSMUST00000171158 Eea1Q8BL66 1411 aa23.37■■□□□ 1.33
Sdc1-205ENSMUST00000171158 Grin2bQ01097 1482 aa23.34■■□□□ 1.33
Sdc1-205ENSMUST00000171158 Las1lA2BE28 776 aaKnown RBP23.33■■□□□ 1.33
Sdc1-205ENSMUST00000171158 Il27Q8K3I6 234 aa23.33■■□□□ 1.33
Sdc1-205ENSMUST00000171158 Arhgef5E9Q7D5 1581 aa23.32■■□□□ 1.32
Sdc1-205ENSMUST00000171158 Ccdc18Q640L5 1455 aa23.31■■□□□ 1.32
Sdc1-205ENSMUST00000171158 Neurod1Q60867 357 aa23.29■■□□□ 1.32
Sdc1-205ENSMUST00000171158 Mroh2bQ7M6Y6 1581 aa23.24■■□□□ 1.31
Sdc1-205ENSMUST00000171158 Setd5Q5XJV7 1441 aa23.23■■□□□ 1.31
Sdc1-205ENSMUST00000171158 Aebp2Q9Z248 504 aaKnown RBP23.22■■□□□ 1.31
Sdc1-205ENSMUST00000171158 Erich3F6QRE9 1637 aa23.22■■□□□ 1.31
Sdc1-205ENSMUST00000171158 Thoc2B1AZI6 1594 aaKnown RBP23.21■■□□□ 1.31
Sdc1-205ENSMUST00000171158 Tiam1Q60610 1591 aa23.18■■□□□ 1.3
Sdc1-205ENSMUST00000171158 Phldb1Q6PDH0 1371 aaKnown RBP23.17■■□□□ 1.3
Sdc1-205ENSMUST00000171158 AqrQ8CFQ3 1481 aaKnown RBP23.17■■□□□ 1.3
Sdc1-205ENSMUST00000171158 TonslQ6NZL6 1363 aa23.16■■□□□ 1.3
Sdc1-205ENSMUST00000171158 Ankrd26Q811D2 1581 aa23.16■■□□□ 1.3
Sdc1-205ENSMUST00000171158 Baz1bQ9Z277 1479 aa23.15■■□□□ 1.3
Sdc1-205ENSMUST00000171158 Wdr66E9Q743 1299 aa23.15■■□□□ 1.3
Sdc1-205ENSMUST00000171158 Kdm5bQ80Y84 1544 aa23.13■■□□□ 1.29
Sdc1-205ENSMUST00000171158 ClspnQ80YR7 1315 aa23.11■■□□□ 1.29
Sdc1-205ENSMUST00000171158 Ap3b1Q9Z1T1 1105 aa23.1■■□□□ 1.29
Sdc1-205ENSMUST00000171158 Cux2P70298 1426 aa23.1■■□□□ 1.29
Sdc1-205ENSMUST00000171158 TchhA0A0B4J1F9 1599 aa23.06■■□□□ 1.28
Sdc1-205ENSMUST00000171158 Pcf11G3X9Z4 1553 aa23.06■■□□□ 1.28
Sdc1-205ENSMUST00000171158 Naip1Q9QWK5 1403 aa23.06■■□□□ 1.28
Retrieved 100 of 22,080 RNA–protein pairs in 39.3 ms