RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ccdc179J3QM76 67 aa9.52□□□□□ -0.89
Trim39-203ENSMUST00000113706 Cypt14J3QPF7 87 aa9.51□□□□□ -0.89
Trim39-203ENSMUST00000113706 Gm2310J3QNJ2 377 aa9.5□□□□□ -0.89
Trim39-203ENSMUST00000113706 Fat1A0A1L1SQU7 4645 aa9.5□□□□□ -0.89
Trim39-203ENSMUST00000113706 A530084C06RikQ3UTW2 186 aa9.5□□□□□ -0.89
Trim39-203ENSMUST00000113706 Lrp1bQ9JI18 4599 aa9.49□□□□□ -0.89
Trim39-203ENSMUST00000113706 Gm20604F8WIA3 75 aa9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 Dync1h1Q9JHU4 4644 aaKnown RBP9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 Dph3Q8K0W9 82 aa9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 A0A286YE49 62 aa9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 Gm10337F7DEP7 55 aa9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 Coa6Q8BGD8 79 aa9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 Defb12Q8K4N3 78 aa9.48□□□□□ -0.89
Trim39-203ENSMUST00000113706 Bean1Q9EQG5 255 aa9.46□□□□□ -0.89
Trim39-203ENSMUST00000113706 Ryr3A2AGL3 4863 aa9.46□□□□□ -0.89
Trim39-203ENSMUST00000113706 9230102O04RikA2ASX7 82 aa9.45□□□□□ -0.9
Trim39-203ENSMUST00000113706 Spint4Q9D263 159 aa9.45□□□□□ -0.9
Trim39-203ENSMUST00000113706 H2al1aQ5M8Q2 105 aa9.45□□□□□ -0.9
Trim39-203ENSMUST00000113706 Pet100P0DJE0 76 aa9.44□□□□□ -0.9
Trim39-203ENSMUST00000113706 Pkhd1E9PZ36 4059 aa9.43□□□□□ -0.9
Trim39-203ENSMUST00000113706 Serp1Q9Z1W5 66 aa9.43□□□□□ -0.9
Trim39-203ENSMUST00000113706 Sec61gP60060 68 aa9.42□□□□□ -0.9
Trim39-203ENSMUST00000113706 1700074P13RikQ9D9G7 251 aa9.4□□□□□ -0.91
Trim39-203ENSMUST00000113706 Gm16253D3Z167 63 aa9.38□□□□□ -0.91
Trim39-203ENSMUST00000113706 Wfdc3Q14AE4 130 aa9.37□□□□□ -0.91
Trim39-203ENSMUST00000113706 Atox1O08997 68 aaKnown RBP9.36□□□□□ -0.91
Trim39-203ENSMUST00000113706 Coa5Q99M07 74 aa9.31□□□□□ -0.92
Trim39-203ENSMUST00000113706 Fat2Q5F226 4351 aa9.31□□□□□ -0.92
Trim39-203ENSMUST00000113706 Gm10267M0QWD8 85 aa9.27□□□□□ -0.93
Trim39-203ENSMUST00000113706 Ryr2E9Q401 4966 aaKnown RBP9.27□□□□□ -0.93
Trim39-203ENSMUST00000113706 Spaca4Q80ZQ0 127 aa9.26□□□□□ -0.93
Trim39-203ENSMUST00000113706 Cdc42se1Q8BHL7 80 aa9.26□□□□□ -0.93
Trim39-203ENSMUST00000113706 Igkv3-3A0A140T8Q0 119 aa9.26□□□□□ -0.93
Trim39-203ENSMUST00000113706 Chtf8P0CG14 533 aa9.24□□□□□ -0.93
Trim39-203ENSMUST00000113706 SacsQ9JLC8 4582 aa9.23□□□□□ -0.93
Trim39-203ENSMUST00000113706 H2al1bA0A087WP11 105 aa9.22□□□□□ -0.93
Trim39-203ENSMUST00000113706 H2al1kJ3QP08 105 aa9.22□□□□□ -0.93
Trim39-203ENSMUST00000113706 H2al1eQ810S6 105 aa9.22□□□□□ -0.93
Trim39-203ENSMUST00000113706 H2al1mQ9DAD9 105 aa9.22□□□□□ -0.93
Trim39-203ENSMUST00000113706 RetnlbQ99P86 105 aa9.19□□□□□ -0.94
Trim39-203ENSMUST00000113706 Gm10197F6QEY5 67 aa9.18□□□□□ -0.94
Trim39-203ENSMUST00000113706 Cypt15B1AXS0 87 aa9.13□□□□□ -0.95
Trim39-203ENSMUST00000113706 Gm10160F6Y577 67 aa9.09□□□□□ -0.95
Trim39-203ENSMUST00000113706 Defb38Q7TNV7 63 aa9.09□□□□□ -0.95
Trim39-203ENSMUST00000113706 Pkhd1l1Q80ZA4 4249 aa9.08□□□□□ -0.96
Trim39-203ENSMUST00000113706 Vps13bQ80TY5 3993 aa9.08□□□□□ -0.96
Trim39-203ENSMUST00000113706 Kmt2cQ8BRH4 4903 aa9.07□□□□□ -0.96
Trim39-203ENSMUST00000113706 Defb13Q8R2I4 64 aa9.01□□□□□ -0.97
Trim39-203ENSMUST00000113706 Lrp1Q91ZX7 4545 aaKnown RBP9.01□□□□□ -0.97
Trim39-203ENSMUST00000113706 Ryr1E9PZQ0 5035 aa9.01□□□□□ -0.97
Trim39-203ENSMUST00000113706 Phxr4P15974 95 aa8.99□□□□□ -0.97
Trim39-203ENSMUST00000113706 Gm21798J3QNU5 87 aa8.95□□□□□ -0.98
Trim39-203ENSMUST00000113706 Krtap19-5O08632 62 aa8.93□□□□□ -0.98
Trim39-203ENSMUST00000113706 Rps29P62274 56 aa8.92□□□□□ -0.98
Trim39-203ENSMUST00000113706 Fat3Q8BNA6 4555 aa8.91□□□□□ -0.98
Trim39-203ENSMUST00000113706 Dnah8Q91XQ0 4731 aa8.91□□□□□ -0.98
Trim39-203ENSMUST00000113706 Gm20661K7N787 53 aa8.87□□□□□ -0.99
Trim39-203ENSMUST00000113706 Gm10643Q3URG9 111 aa8.87□□□□□ -0.99
Trim39-203ENSMUST00000113706 Krtap3-2Q9D638 99 aa8.82□□□□□ -1
Trim39-203ENSMUST00000113706 Krtap3-3Q9D7P0 99 aa8.82□□□□□ -1
Trim39-203ENSMUST00000113706 Abca13Q5SSE9 5034 aa8.81□□□□□ -1
Trim39-203ENSMUST00000113706 Gm11939A2A592 99 aa8.81□□□□□ -1
Trim39-203ENSMUST00000113706 Gm26620Q9CY65 116 aa8.8□□□□□ -1
Trim39-203ENSMUST00000113706 4933415A04RikQ9D443 101 aa8.8□□□□□ -1
Trim39-203ENSMUST00000113706 Gm10999F6Q4M4 69 aa8.79□□□□□ -1
Trim39-203ENSMUST00000113706 SptssbQ925E8 76 aa8.79□□□□□ -1
Trim39-203ENSMUST00000113706 Q8BGJ3 129 aa8.73□□□□□ -1.01
Trim39-203ENSMUST00000113706 2310079G19RikQ9D6L6 185 aa8.73□□□□□ -1.01
Trim39-203ENSMUST00000113706 Gm9736A0A1W2P7N1 277 aa8.73□□□□□ -1.01
Trim39-203ENSMUST00000113706 Mycbp2Q7TPH6 4711 aa8.71□□□□□ -1.01
Trim39-203ENSMUST00000113706 2310034C09RikQ9D746 214 aa8.71□□□□□ -1.02
Trim39-203ENSMUST00000113706 Sox16Q62247 57 aa8.69□□□□□ -1.02
Trim39-203ENSMUST00000113706 A930033H14RikG5E8X6 103 aa8.68□□□□□ -1.02
Trim39-203ENSMUST00000113706 D6Ertd527eA0A0N4SWI3 464 aa8.67□□□□□ -1.02
Trim39-203ENSMUST00000113706 1700042G07RikB1AUF7 90 aa8.67□□□□□ -1.02
Trim39-203ENSMUST00000113706 Ndufs5Q99LY9 106 aa8.65□□□□□ -1.02
Trim39-203ENSMUST00000113706 Ndufb1P0DN34 57 aa8.64□□□□□ -1.03
Trim39-203ENSMUST00000113706 Gm3646F6S692 53 aa8.63□□□□□ -1.03
Trim39-203ENSMUST00000113706 Uqcr11Q9CPX8 56 aa8.61□□□□□ -1.03
Trim39-203ENSMUST00000113706 Herc2Q4U2R1 4836 aa8.61□□□□□ -1.03
Trim39-203ENSMUST00000113706 Gm5767A0A0J9YTU8 78 aa8.61□□□□□ -1.03
Trim39-203ENSMUST00000113706 Gm4491E0CX42 125 aa8.59□□□□□ -1.03
Trim39-203ENSMUST00000113706 Kiaa1109A2AAE1 5005 aa8.58□□□□□ -1.04
Trim39-203ENSMUST00000113706 Limd2Q8BGB5 128 aa8.58□□□□□ -1.04
Trim39-203ENSMUST00000113706 Dnhd1D3Z2X2 4750 aa8.57□□□□□ -1.04
Trim39-203ENSMUST00000113706 Defb1P56386 69 aa8.57□□□□□ -1.04
Trim39-203ENSMUST00000113706 Birc6O88738 4882 aa8.55□□□□□ -1.04
Trim39-203ENSMUST00000113706 Gm5965D3Z724 196 aa8.55□□□□□ -1.04
Trim39-203ENSMUST00000113706 4930507D05RikQ8C9C9 103 aa8.52□□□□□ -1.05
Trim39-203ENSMUST00000113706 Gm9821Q8K076 103 aa8.5□□□□□ -1.05
Trim39-203ENSMUST00000113706 HydinQ80W93 5154 aa8.46□□□□□ -1.06
Trim39-203ENSMUST00000113706 Krtap15-1Q9QZU5 150 aa8.42□□□□□ -1.06
Trim39-203ENSMUST00000113706 Rpl37Q9D823 97 aa8.37□□□□□ -1.07
Trim39-203ENSMUST00000113706 Rnase13Q5GAM7 153 aa8.3□□□□□ -1.08
Trim39-203ENSMUST00000113706 Lrp2A2ARV4 4660 aa8.3□□□□□ -1.08
Trim39-203ENSMUST00000113706 Cox6b2Q80ZN9 88 aa8.25□□□□□ -1.09
Trim39-203ENSMUST00000113706 PcloQ9QYX7 5068 aa8.23□□□□□ -1.09
Trim39-203ENSMUST00000113706 Gm12216A0A1W2P827 62 aa8.16□□□□□ -1.1
Trim39-203ENSMUST00000113706 Gm17416Q30KP4 66 aa8.12□□□□□ -1.11
Trim39-203ENSMUST00000113706 CriptO70333 101 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 543.2 ms