RNA–Protein interactions for RNA: ENSMUST00000113701.7

Tpm1-214, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-214ENSMUST00000113701 Mrpl34Q99N91 92 aa8.69□□□□□ -1.02
Tpm1-214ENSMUST00000113701 UqcrqQ9CQ69 82 aa8.69□□□□□ -1.02
Tpm1-214ENSMUST00000113701 Igkv8-21A0A140T8P7 120 aa8.67□□□□□ -1.02
Tpm1-214ENSMUST00000113701 Gm11555B1AQ89 175 aa8.67□□□□□ -1.02
Tpm1-214ENSMUST00000113701 Gm2310J3QNJ2 377 aa8.66□□□□□ -1.02
Tpm1-214ENSMUST00000113701 C130032M10RikQ8C888 123 aa8.65□□□□□ -1.03
Tpm1-214ENSMUST00000113701 Ubl5Q9EPV8 73 aa8.65□□□□□ -1.03
Tpm1-214ENSMUST00000113701 Dph3Q8K0W9 82 aa8.63□□□□□ -1.03
Tpm1-214ENSMUST00000113701 Fam240bJ3QMB3 78 aa8.62□□□□□ -1.03
Tpm1-214ENSMUST00000113701 Mycbp2Q7TPH6 4711 aa8.62□□□□□ -1.03
Tpm1-214ENSMUST00000113701 Gm45213A0A0U1RNZ6 101 aa8.57□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Krtap4-2B1AQ85 167 aa8.56□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Tmem254aP0DN89 123 aa8.55□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Tmem254bP0DN90 123 aa8.55□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Tmem254cP0DN91 123 aa8.55□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Gm18596A0A1W2P860 280 aa8.53□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Trav3-1Q5R1I8 114 aa8.53□□□□□ -1.04
Tpm1-214ENSMUST00000113701 MplkipQ9D011 178 aa8.53□□□□□ -1.04
Tpm1-214ENSMUST00000113701 Gm9736A0A1W2P7N1 277 aa8.51□□□□□ -1.05
Tpm1-214ENSMUST00000113701 Cypt15B1AXS0 87 aa8.49□□□□□ -1.05
Tpm1-214ENSMUST00000113701 Reg3aO09037 175 aa8.49□□□□□ -1.05
Tpm1-214ENSMUST00000113701 Herc1E9PZP8 4859 aa8.48□□□□□ -1.05
Tpm1-214ENSMUST00000113701 Cystm1Q8K353 104 aa8.48□□□□□ -1.05
Tpm1-214ENSMUST00000113701 Igkv8-19A0A0G2JFN8 121 aa8.46□□□□□ -1.05
Tpm1-214ENSMUST00000113701 Igkv3-3A0A140T8Q0 119 aa8.43□□□□□ -1.06
Tpm1-214ENSMUST00000113701 GhrhP16043 103 aa8.4□□□□□ -1.06
Tpm1-214ENSMUST00000113701 Defa21Q8C1P2 93 aa8.4□□□□□ -1.07
Tpm1-214ENSMUST00000113701 Lrp2A2ARV4 4660 aa8.39□□□□□ -1.07
Tpm1-214ENSMUST00000113701 Gm26620Q9CY65 116 aa8.37□□□□□ -1.07
Tpm1-214ENSMUST00000113701 Gm5767A0A0J9YTU8 78 aa8.35□□□□□ -1.07
Tpm1-214ENSMUST00000113701 Hist1h4aP62806 103 aaKnown RBP8.34□□□□□ -1.08
Tpm1-214ENSMUST00000113701 Gm5965D3Z724 196 aa8.33□□□□□ -1.08
Tpm1-214ENSMUST00000113701 Sox16Q62247 57 aa8.33□□□□□ -1.08
Tpm1-214ENSMUST00000113701 Prr15lQ8JZM2 100 aa8.33□□□□□ -1.08
Tpm1-214ENSMUST00000113701 BatfO35284 125 aa8.31□□□□□ -1.08
Tpm1-214ENSMUST00000113701 Atp5eP56382 52 aa8.31□□□□□ -1.08
Tpm1-214ENSMUST00000113701 SvipQ3UZP4 77 aa8.31□□□□□ -1.08
Tpm1-214ENSMUST00000113701 BikO70337 150 aa8.3□□□□□ -1.08
Tpm1-214ENSMUST00000113701 Sec61bQ9CQS8 96 aaKnown RBP8.3□□□□□ -1.08
Tpm1-214ENSMUST00000113701 A930033H14RikG5E8X6 103 aa8.27□□□□□ -1.08
Tpm1-214ENSMUST00000113701 Ndufc1Q9CQY9 76 aa8.27□□□□□ -1.08
Tpm1-214ENSMUST00000113701 A0A286YE49 62 aa8.25□□□□□ -1.09
Tpm1-214ENSMUST00000113701 Defb13Q8R2I4 64 aa8.24□□□□□ -1.09
Tpm1-214ENSMUST00000113701 9230102O04RikA2ASX7 82 aa8.21□□□□□ -1.09
Tpm1-214ENSMUST00000113701 Scgb1b2O35176 93 aa8.21□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Samd13D3YUG0 102 aa8.2□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Gm10267M0QWD8 85 aa8.18□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Fam229bQ8CF36 80 aa8.18□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Spink8Q09TK9 105 aa8.18□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Gm9821Q8K076 103 aa8.16□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Naa38Q9D2U5 125 aa8.16□□□□□ -1.1
Tpm1-214ENSMUST00000113701 Ush2AQ2QI47 5193 aa8.11□□□□□ -1.11
Tpm1-214ENSMUST00000113701 Rpl37Q9D823 97 aa8.11□□□□□ -1.11
Tpm1-214ENSMUST00000113701 Prm1P02319 51 aa8.1□□□□□ -1.11
Tpm1-214ENSMUST00000113701 Krtap3-1A2A591 98 aa8.08□□□□□ -1.12
Tpm1-214ENSMUST00000113701 Krtap15-1Q9QZU5 150 aa8.08□□□□□ -1.12
Tpm1-214ENSMUST00000113701 Gm7735D3YX18 52 aa8.07□□□□□ -1.12
Tpm1-214ENSMUST00000113701 Anapc13Q8R034 74 aa8.07□□□□□ -1.12
Tpm1-214ENSMUST00000113701 4930518I15RikQ3V2W7 57 aa8.06□□□□□ -1.12
Tpm1-214ENSMUST00000113701 1700074P13RikQ9D9G7 251 aa8.06□□□□□ -1.12
Tpm1-214ENSMUST00000113701 7530416G11RikJ3QJX6 159 aa8.05□□□□□ -1.12
Tpm1-214ENSMUST00000113701 Serp2Q6TAW2 65 aa8.03□□□□□ -1.12
Tpm1-214ENSMUST00000113701 Gm9789Q8BIG3 52 aa8.03□□□□□ -1.12
Tpm1-214ENSMUST00000113701 4932415D10RikA0A1W2P6U8 4986 aa7.96□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Hmcn2A2AJ76 5100 aa7.94□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Apoc4Q61268 124 aa7.93□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Atox1O08997 68 aaKnown RBP7.92□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Krtap31-2Q8CAY5 177 aa7.92□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Ubr4A2AN08 5180 aa7.92□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Rnase13Q5GAM7 153 aa7.92□□□□□ -1.14
Tpm1-214ENSMUST00000113701 Gm4491E0CX42 125 aa7.89□□□□□ -1.15
Tpm1-214ENSMUST00000113701 Coa6Q8BGD8 79 aa7.89□□□□□ -1.15
Tpm1-214ENSMUST00000113701 Spint4Q9D263 159 aa7.87□□□□□ -1.15
Tpm1-214ENSMUST00000113701 B230307C23RikQ8BLB2 64 aa7.86□□□□□ -1.15
Tpm1-214ENSMUST00000113701 Gm17416Q30KP4 66 aa7.85□□□□□ -1.15
Tpm1-214ENSMUST00000113701 Chtf8P0CG14 533 aa7.84□□□□□ -1.15
Tpm1-214ENSMUST00000113701 2310034C09RikQ9D746 214 aa7.83□□□□□ -1.16
Tpm1-214ENSMUST00000113701 Gm28539A0A087WSL9 92 aa7.82□□□□□ -1.16
Tpm1-214ENSMUST00000113701 Q8BGJ3 129 aa7.81□□□□□ -1.16
Tpm1-214ENSMUST00000113701 Gm10999F6Q4M4 69 aa7.79□□□□□ -1.16
Tpm1-214ENSMUST00000113701 Gm10160F6Y577 67 aa7.79□□□□□ -1.16
Tpm1-214ENSMUST00000113701 2310057N15RikQ9D6T8 200 aa7.79□□□□□ -1.16
Tpm1-214ENSMUST00000113701 Gm19402J3QJV4 266 aa7.77□□□□□ -1.17
Tpm1-214ENSMUST00000113701 Gm10643Q3URG9 111 aa7.76□□□□□ -1.17
Tpm1-214ENSMUST00000113701 2310079G19RikQ9D6L6 185 aa7.74□□□□□ -1.17
Tpm1-214ENSMUST00000113701 Gm21798J3QNU5 87 aa7.73□□□□□ -1.17
Tpm1-214ENSMUST00000113701 4930507D05RikQ8C9C9 103 aa7.73□□□□□ -1.17
Tpm1-214ENSMUST00000113701 Defb38Q7TNV7 63 aa7.72□□□□□ -1.17
Tpm1-214ENSMUST00000113701 Krtap1-3A2A588 173 aa7.65□□□□□ -1.18
Tpm1-214ENSMUST00000113701 Smlr1J3QMJ4 66 aa7.65□□□□□ -1.18
Tpm1-214ENSMUST00000113701 Pcp4P63054 62 aa7.65□□□□□ -1.18
Tpm1-214ENSMUST00000113701 Coa5Q99M07 74 aa7.63□□□□□ -1.19
Tpm1-214ENSMUST00000113701 Krtap16-3Q8C1I6 86 aa7.62□□□□□ -1.19
Tpm1-214ENSMUST00000113701 Krtap31-1Q9D644 177 aa7.61□□□□□ -1.19
Tpm1-214ENSMUST00000113701 Krtap19-1Q925H2 87 aa7.6□□□□□ -1.19
Tpm1-214ENSMUST00000113701 Fam229aB2KGE5 128 aa7.57□□□□□ -1.2
Tpm1-214ENSMUST00000113701 Tmem258P61166 79 aa7.57□□□□□ -1.2
Tpm1-214ENSMUST00000113701 Crct1Q6PAI5 102 aa7.57□□□□□ -1.2
Tpm1-214ENSMUST00000113701 Krtap19-3Q925H6 87 aa7.55□□□□□ -1.2
Tpm1-214ENSMUST00000113701 Lce1jD3YUU5 139 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms