RNA–Protein interactions for RNA: ENSMUST00000113695.7

Tpm1-211, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-211ENSMUST00000113695 Reg3aO09037 175 aa11.76□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Cdip1Q9DB75 208 aa11.76□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Cypt15B1AXS0 87 aa11.75□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Fam240bJ3QMB3 78 aa11.75□□□□□ -0.53
Tpm1-211ENSMUST00000113695 GhrhP16043 103 aa11.75□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Tmem254aP0DN89 123 aa11.72□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Tmem254bP0DN90 123 aa11.72□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Tmem254cP0DN91 123 aa11.72□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Defa21Q8C1P2 93 aa11.71□□□□□ -0.53
Tpm1-211ENSMUST00000113695 Lrp2A2ARV4 4660 aa11.71□□□□□ -0.54
Tpm1-211ENSMUST00000113695 Gm45213A0A0U1RNZ6 101 aa11.7□□□□□ -0.54
Tpm1-211ENSMUST00000113695 Cystm1Q8K353 104 aa11.7□□□□□ -0.54
Tpm1-211ENSMUST00000113695 Trav3-1Q5R1I8 114 aa11.69□□□□□ -0.54
Tpm1-211ENSMUST00000113695 Igkv8-19A0A0G2JFN8 121 aa11.68□□□□□ -0.54
Tpm1-211ENSMUST00000113695 Gm5965D3Z724 196 aa11.64□□□□□ -0.55
Tpm1-211ENSMUST00000113695 Krtap3-2Q9D638 99 aa11.63□□□□□ -0.55
Tpm1-211ENSMUST00000113695 Krtap3-3Q9D7P0 99 aa11.63□□□□□ -0.55
Tpm1-211ENSMUST00000113695 Igkv3-3A0A140T8Q0 119 aa11.62□□□□□ -0.55
Tpm1-211ENSMUST00000113695 Gm5767A0A0J9YTU8 78 aa11.6□□□□□ -0.55
Tpm1-211ENSMUST00000113695 Gm26620Q9CY65 116 aa11.59□□□□□ -0.55
Tpm1-211ENSMUST00000113695 A930033H14RikG5E8X6 103 aa11.57□□□□□ -0.56
Tpm1-211ENSMUST00000113695 Herc1E9PZP8 4859 aa11.55□□□□□ -0.56
Tpm1-211ENSMUST00000113695 Gm18596A0A1W2P860 280 aa11.54□□□□□ -0.56
Tpm1-211ENSMUST00000113695 BikO70337 150 aa11.53□□□□□ -0.56
Tpm1-211ENSMUST00000113695 Hist1h4aP62806 103 aaKnown RBP11.53□□□□□ -0.56
Tpm1-211ENSMUST00000113695 Prr15lQ8JZM2 100 aa11.52□□□□□ -0.57
Tpm1-211ENSMUST00000113695 BatfO35284 125 aa11.49□□□□□ -0.57
Tpm1-211ENSMUST00000113695 Defb13Q8R2I4 64 aa11.45□□□□□ -0.58
Tpm1-211ENSMUST00000113695 A0A286YE49 62 aa11.39□□□□□ -0.59
Tpm1-211ENSMUST00000113695 Gm9821Q8K076 103 aa11.39□□□□□ -0.59
Tpm1-211ENSMUST00000113695 Gm10267M0QWD8 85 aa11.38□□□□□ -0.59
Tpm1-211ENSMUST00000113695 Scgb1b2O35176 93 aa11.38□□□□□ -0.59
Tpm1-211ENSMUST00000113695 Samd13D3YUG0 102 aa11.37□□□□□ -0.59
Tpm1-211ENSMUST00000113695 Atp5eP56382 52 aa11.32□□□□□ -0.6
Tpm1-211ENSMUST00000113695 Spink8Q09TK9 105 aa11.31□□□□□ -0.6
Tpm1-211ENSMUST00000113695 Ndufc1Q9CQY9 76 aa11.31□□□□□ -0.6
Tpm1-211ENSMUST00000113695 Krtap15-1Q9QZU5 150 aa11.3□□□□□ -0.6
Tpm1-211ENSMUST00000113695 Naa38Q9D2U5 125 aa11.28□□□□□ -0.6
Tpm1-211ENSMUST00000113695 Fam229bQ8CF36 80 aa11.27□□□□□ -0.6
Tpm1-211ENSMUST00000113695 Rpl37Q9D823 97 aa11.24□□□□□ -0.61
Tpm1-211ENSMUST00000113695 Prm1P02319 51 aa11.23□□□□□ -0.61
Tpm1-211ENSMUST00000113695 Prr13Q9CQJ5 137 aa11.23□□□□□ -0.61
Tpm1-211ENSMUST00000113695 1700074P13RikQ9D9G7 251 aa11.14□□□□□ -0.63
Tpm1-211ENSMUST00000113695 Gm9789Q8BIG3 52 aa11.13□□□□□ -0.63
Tpm1-211ENSMUST00000113695 Gm7735D3YX18 52 aa11.12□□□□□ -0.63
Tpm1-211ENSMUST00000113695 Sec61bQ9CQS8 96 aaKnown RBP11.11□□□□□ -0.63
Tpm1-211ENSMUST00000113695 7530416G11RikJ3QJX6 159 aa11.09□□□□□ -0.63
Tpm1-211ENSMUST00000113695 Ush2AQ2QI47 5193 aa11.08□□□□□ -0.63
Tpm1-211ENSMUST00000113695 Krtap4-1Q3UUY3 169 aa11.06□□□□□ -0.64
Tpm1-211ENSMUST00000113695 Anapc13Q8R034 74 aa11.06□□□□□ -0.64
Tpm1-211ENSMUST00000113695 4930518I15RikQ3V2W7 57 aa11.05□□□□□ -0.64
Tpm1-211ENSMUST00000113695 Apoc4Q61268 124 aa11.05□□□□□ -0.64
Tpm1-211ENSMUST00000113695 Rnase13Q5GAM7 153 aa11.02□□□□□ -0.65
Tpm1-211ENSMUST00000113695 Serp2Q6TAW2 65 aa10.98□□□□□ -0.65
Tpm1-211ENSMUST00000113695 Gm4491E0CX42 125 aa10.95□□□□□ -0.66
Tpm1-211ENSMUST00000113695 2310057N15RikQ9D6T8 200 aa10.95□□□□□ -0.66
Tpm1-211ENSMUST00000113695 Hmcn2A2AJ76 5100 aa10.93□□□□□ -0.66
Tpm1-211ENSMUST00000113695 2310034C09RikQ9D746 214 aa10.93□□□□□ -0.66
Tpm1-211ENSMUST00000113695 Atox1O08997 68 aaKnown RBP10.9□□□□□ -0.66
Tpm1-211ENSMUST00000113695 B230307C23RikQ8BLB2 64 aa10.84□□□□□ -0.67
Tpm1-211ENSMUST00000113695 Q8BGJ3 129 aa10.84□□□□□ -0.67
Tpm1-211ENSMUST00000113695 Gm28539A0A087WSL9 92 aa10.83□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Gm10999F6Q4M4 69 aa10.82□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Coa6Q8BGD8 79 aa10.81□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Gm17416Q30KP4 66 aa10.8□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Chtf8P0CG14 533 aa10.79□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Spint4Q9D263 159 aa10.78□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Defb38Q7TNV7 63 aa10.77□□□□□ -0.68
Tpm1-211ENSMUST00000113695 Ubr4A2AN08 5180 aa10.77□□□□□ -0.69
Tpm1-211ENSMUST00000113695 9230102O04RikA2ASX7 82 aa10.76□□□□□ -0.69
Tpm1-211ENSMUST00000113695 Gm10160F6Y577 67 aa10.72□□□□□ -0.69
Tpm1-211ENSMUST00000113695 4932415D10RikA0A1W2P6U8 4986 aa10.69□□□□□ -0.7
Tpm1-211ENSMUST00000113695 Krtap1-3A2A588 173 aa10.68□□□□□ -0.7
Tpm1-211ENSMUST00000113695 Gm21798J3QNU5 87 aa10.68□□□□□ -0.7
Tpm1-211ENSMUST00000113695 4930507D05RikQ8C9C9 103 aa10.68□□□□□ -0.7
Tpm1-211ENSMUST00000113695 2310079G19RikQ9D6L6 185 aa10.62□□□□□ -0.71
Tpm1-211ENSMUST00000113695 Crct1Q6PAI5 102 aa10.61□□□□□ -0.71
Tpm1-211ENSMUST00000113695 Gm10643Q3URG9 111 aa10.6□□□□□ -0.71
Tpm1-211ENSMUST00000113695 Krtap16-3Q8C1I6 86 aa10.58□□□□□ -0.72
Tpm1-211ENSMUST00000113695 Fam229aB2KGE5 128 aa10.57□□□□□ -0.72
Tpm1-211ENSMUST00000113695 Krtap19-1Q925H2 87 aa10.52□□□□□ -0.73
Tpm1-211ENSMUST00000113695 2210017I01RikA0A0A6YVV1 95 aa10.51□□□□□ -0.73
Tpm1-211ENSMUST00000113695 Krtap19-3Q925H6 87 aa10.49□□□□□ -0.73
Tpm1-211ENSMUST00000113695 Coa5Q99M07 74 aa10.49□□□□□ -0.73
Tpm1-211ENSMUST00000113695 Smlr1J3QMJ4 66 aa10.47□□□□□ -0.73
Tpm1-211ENSMUST00000113695 ZanO88799 5376 aa10.44□□□□□ -0.74
Tpm1-211ENSMUST00000113695 Gm11563B1AQ90 168 aa10.39□□□□□ -0.75
Tpm1-211ENSMUST00000113695 Krtap4-7Q9D732 168 aa10.39□□□□□ -0.75
Tpm1-211ENSMUST00000113695 LorP18165 486 aa10.36□□□□□ -0.75
Tpm1-211ENSMUST00000113695 Krtap13-1Q8K198 168 aa10.36□□□□□ -0.75
Tpm1-211ENSMUST00000113695 1700042G07RikB1AUF7 90 aa10.34□□□□□ -0.75
Tpm1-211ENSMUST00000113695 Gm10318A0A1W2P728 225 aa10.32□□□□□ -0.76
Tpm1-211ENSMUST00000113695 Gm19402J3QJV4 266 aa10.32□□□□□ -0.76
Tpm1-211ENSMUST00000113695 Tmem258P61166 79 aa10.32□□□□□ -0.76
Tpm1-211ENSMUST00000113695 Pet100P0DJE0 76 aa10.29□□□□□ -0.76
Tpm1-211ENSMUST00000113695 Defb1P56386 69 aa10.29□□□□□ -0.76
Tpm1-211ENSMUST00000113695 Fat4Q2PZL6 4981 aa10.27□□□□□ -0.77
Tpm1-211ENSMUST00000113695 SptssbQ925E8 76 aa10.27□□□□□ -0.77
Tpm1-211ENSMUST00000113695 Krtap1-4Q3V2D6 188 aa10.24□□□□□ -0.77
Tpm1-211ENSMUST00000113695 SnurfQ9WU12 71 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms