RNA–Protein interactions for RNA: ENSMUST00000113695.7

Tpm1-211, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-211ENSMUST00000113695 Gm35339A0A140LHH9 1649 aa45.49■■■■■ 4.87
Tpm1-211ENSMUST00000113695 NischQ80TM9 1593 aa45.2■■■■■ 4.83
Tpm1-211ENSMUST00000113695 Abcc9P70170 1546 aa43.83■■■■■ 4.61
Tpm1-211ENSMUST00000113695 Abcc8B2RUS7 1588 aa43.48■■■■■ 4.55
Tpm1-211ENSMUST00000113695 ScribQ80U72 1612 aa41.44■■■■■ 4.22
Tpm1-211ENSMUST00000113695 Dcaf1Q80TR8 1506 aa40.34■■■■■ 4.05
Tpm1-211ENSMUST00000113695 NacadQ5SWP3 1504 aa40.31■■■■■ 4.04
Tpm1-211ENSMUST00000113695 Kdm5dQ62240 1548 aa40.27■■■■■ 4.04
Tpm1-211ENSMUST00000113695 Rhox8Q6VSS7 320 aa39.75■■■■□ 3.95
Tpm1-211ENSMUST00000113695 Sycp2Q9CUU3 1500 aa39.46■■■■□ 3.91
Tpm1-211ENSMUST00000113695 Rb1cc1Q9ESK9 1588 aa39.45■■■■□ 3.91
Tpm1-211ENSMUST00000113695 Ccdc180J3QNE4 1664 aa39.16■■■■□ 3.86
Tpm1-211ENSMUST00000113695 Baz1aO88379 1555 aa38.98■■■■□ 3.83
Tpm1-211ENSMUST00000113695 Crybg2B7ZCC2 1516 aa38.81■■■■□ 3.8
Tpm1-211ENSMUST00000113695 BicraF8VPZ9 1578 aa38.75■■■■□ 3.79
Tpm1-211ENSMUST00000113695 Zcchc6Q5BLK4 1491 aaKnown RBP38.22■■■■□ 3.71
Tpm1-211ENSMUST00000113695 Rtl1Q7M732 1744 aa38■■■■□ 3.67
Tpm1-211ENSMUST00000113695 Smarca2Q6DIC0 1577 aa37.91■■■■□ 3.66
Tpm1-211ENSMUST00000113695 Pds5bQ4VA53 1446 aaKnown RBP37.59■■■■□ 3.61
Tpm1-211ENSMUST00000113695 Cecr2E9Q2Z1 1453 aa37.41■■■■□ 3.58
Tpm1-211ENSMUST00000113695 Atad2bE9Q166 1460 aaKnown RBP37.37■■■■□ 3.57
Tpm1-211ENSMUST00000113695 Smarca4Q3TKT4 1613 aaKnown RBP37.35■■■■□ 3.57
Tpm1-211ENSMUST00000113695 Ccdc136Q3TVA9 1136 aa37.06■■■■□ 3.52
Tpm1-211ENSMUST00000113695 Iqgap2Q3UQ44 1575 aa37.02■■■■□ 3.52
Tpm1-211ENSMUST00000113695 Brd4Q9ESU6 1400 aaKnown RBP36.93■■■■□ 3.5
Tpm1-211ENSMUST00000113695 Thoc2B1AZI6 1594 aaKnown RBP36.93■■■■□ 3.5
Tpm1-211ENSMUST00000113695 Ercc6F8VPZ5 1481 aa36.79■■■■□ 3.48
Tpm1-211ENSMUST00000113695 CftrP26361 1476 aa36.77■■■■□ 3.48
Tpm1-211ENSMUST00000113695 Synj1Q8CHC4 1574 aa36.73■■■■□ 3.47
Tpm1-211ENSMUST00000113695 Cttnbp2B9EJA2 1648 aa36.72■■■■□ 3.47
Tpm1-211ENSMUST00000113695 Trim41Q5NCC3 630 aa36.67■■■■□ 3.46
Tpm1-211ENSMUST00000113695 Wdr62Q3U3T8 1523 aa36.6■■■■□ 3.45
Tpm1-211ENSMUST00000113695 Frmpd1A2AKB4 1549 aa36.53■■■■□ 3.44
Tpm1-211ENSMUST00000113695 Dnajc5bQ9CQ94 199 aa36.47■■■■□ 3.43
Tpm1-211ENSMUST00000113695 Cc2d2aQ8CFW7 1633 aa36.36■■■■□ 3.41
Tpm1-211ENSMUST00000113695 Fam135aQ6NS59 1506 aa36.27■■■■□ 3.4
Tpm1-211ENSMUST00000113695 Phldb1Q6PDH0 1371 aaKnown RBP36.2■■■■□ 3.39
Tpm1-211ENSMUST00000113695 Esf1Q3V1V3 845 aaKnown RBP36.16■■■■□ 3.38
Tpm1-211ENSMUST00000113695 Unc13aQ4KUS2 1712 aa36.04■■■■□ 3.36
Tpm1-211ENSMUST00000113695 Baz1bQ9Z277 1479 aa36■■■■□ 3.35
Tpm1-211ENSMUST00000113695 Golga3P55937 1487 aa35.87■■■■□ 3.33
Tpm1-211ENSMUST00000113695 Ubl4bQ9CQ84 188 aa35.79■■■■□ 3.32
Tpm1-211ENSMUST00000113695 Top2bQ64511 1612 aa35.74■■■■□ 3.31
Tpm1-211ENSMUST00000113695 Cngb1E1AZ71 1325 aa35.64■■■■□ 3.3
Tpm1-211ENSMUST00000113695 Rsf1E9PWW9 1441 aaKnown RBP35.64■■■■□ 3.3
Tpm1-211ENSMUST00000113695 Lamc3Q9R0B6 1581 aa35.54■■■■□ 3.28
Tpm1-211ENSMUST00000113695 Kif15Q6P9L6 1387 aa35.48■■■■□ 3.27
Tpm1-211ENSMUST00000113695 Mrc2Q64449 1479 aa35.42■■■■□ 3.26
Tpm1-211ENSMUST00000113695 TnnQ80Z71 1560 aa35.36■■■■□ 3.25
Tpm1-211ENSMUST00000113695 Fmn1Q05860 1466 aa35.34■■■■□ 3.25
Tpm1-211ENSMUST00000113695 Cux2P70298 1426 aa35.29■■■■□ 3.24
Tpm1-211ENSMUST00000113695 HrcG5E8J6 738 aa35.12■■■■□ 3.21
Tpm1-211ENSMUST00000113695 Ccdc88bQ4QRL3 1481 aa35.04■■■■□ 3.2
Tpm1-211ENSMUST00000113695 Ccdc18Q640L5 1455 aa35.03■■■■□ 3.2
Tpm1-211ENSMUST00000113695 Npm1Q61937 292 aaKnown RBP35■■■■□ 3.19
Tpm1-211ENSMUST00000113695 Camsap1A2AHC3 1581 aa34.96■■■■□ 3.19
Tpm1-211ENSMUST00000113695 Cep164Q5DU05 1446 aa34.95■■■■□ 3.19
Tpm1-211ENSMUST00000113695 Chic1Q8CBW7 227 aa34.88■■■■□ 3.17
Tpm1-211ENSMUST00000113695 Kif21aQ9QXL2 1672 aa34.82■■■■□ 3.16
Tpm1-211ENSMUST00000113695 Il27Q8K3I6 234 aa34.8■■■■□ 3.16
Tpm1-211ENSMUST00000113695 Top2aQ01320 1528 aaKnown RBP34.79■■■■□ 3.16
Tpm1-211ENSMUST00000113695 LrpprcQ6PB66 1392 aaKnown RBP34.71■■■■□ 3.15
Tpm1-211ENSMUST00000113695 Dhx29Q6PGC1 1365 aaKnown RBP34.6■■■■□ 3.13
Tpm1-211ENSMUST00000113695 Grin2bQ01097 1482 aa34.58■■■■□ 3.13
Tpm1-211ENSMUST00000113695 Lrriq1Q0P5X1 1673 aa34.56■■■■□ 3.12
Tpm1-211ENSMUST00000113695 PogzQ8BZH4 1409 aaKnown RBP34.56■■■■□ 3.12
Tpm1-211ENSMUST00000113695 Crocc2F6XLV1 1638 aa34.46■■■■□ 3.11
Tpm1-211ENSMUST00000113695 NrkQ9R0G8 1455 aa34.43■■■■□ 3.1
Tpm1-211ENSMUST00000113695 Duox2A2AQ99 1517 aa34.41■■■■□ 3.1
Tpm1-211ENSMUST00000113695 Efcab5A0JP43 1406 aa34.36■■■■□ 3.09
Tpm1-211ENSMUST00000113695 Urb2E9Q7L1 1524 aaKnown RBP34.33■■■■□ 3.09
Tpm1-211ENSMUST00000113695 Plb1Q3TTY0 1478 aa34.32■■■■□ 3.08
Tpm1-211ENSMUST00000113695 Shroom4Q1W617 1475 aa34.26■■■■□ 3.08
Tpm1-211ENSMUST00000113695 PtprkP35822 1457 aa34.18■■■■□ 3.06
Tpm1-211ENSMUST00000113695 Ift140E9PY46 1464 aa34.13■■■■□ 3.05
Tpm1-211ENSMUST00000113695 Gab3Q8BSM5 595 aa34.12■■■■□ 3.05
Tpm1-211ENSMUST00000113695 Samd9lQ69Z37 1561 aa34.11■■■■□ 3.05
Tpm1-211ENSMUST00000113695 Eif4g3Q80XI3 1579 aaKnown RBP34.11■■■■□ 3.05
Tpm1-211ENSMUST00000113695 Rapgef2Q8CHG7 1496 aa34.05■■■■□ 3.04
Tpm1-211ENSMUST00000113695 Npm2Q80W85 207 aa34.01■■■■□ 3.04
Tpm1-211ENSMUST00000113695 Disp1Q3TDN0 1521 aa33.97■■■■□ 3.03
Tpm1-211ENSMUST00000113695 Pbrm1Q8BSQ9 1634 aaKnown RBP33.91■■■■□ 3.02
Tpm1-211ENSMUST00000113695 SynmQ70IV5 1561 aa33.86■■■■□ 3.01
Tpm1-211ENSMUST00000113695 Mroh2bQ7M6Y6 1581 aa33.85■■■■□ 3.01
Tpm1-211ENSMUST00000113695 Rad54l2Q99NG0 1466 aa33.85■■■■□ 3.01
Tpm1-211ENSMUST00000113695 Nup160Q9Z0W3 1402 aaKnown RBP33.82■■■■□ 3
Tpm1-211ENSMUST00000113695 Zeb1Q64318 1117 aa33.81■■■■□ 3
Tpm1-211ENSMUST00000113695 Rusc2Q80U22 1514 aa33.8■■■■□ 3
Tpm1-211ENSMUST00000113695 Cep162Q6ZQ06 1403 aa33.8■■■■□ 3
Tpm1-211ENSMUST00000113695 Magi3Q9EQJ9 1476 aa33.78■■■■□ 3
Tpm1-211ENSMUST00000113695 Eif4g1Q6NZJ6 1600 aaKnown RBP33.77■■■■□ 3
Tpm1-211ENSMUST00000113695 Map3k1P53349 1493 aa33.77■■■■□ 3
Tpm1-211ENSMUST00000113695 Grin2aP35436 1464 aa33.76■■■■□ 3
Tpm1-211ENSMUST00000113695 Arhgap35Q91YM2 1499 aa33.76■■■■□ 3
Tpm1-211ENSMUST00000113695 Cc2d2bA0A286YDU8 1405 aa33.75■■■□□ 2.99
Tpm1-211ENSMUST00000113695 Setd1bQ8CFT2 1985 aa33.74■■■□□ 2.99
Tpm1-211ENSMUST00000113695 Gpatch8A2A6A1 1505 aa33.68■■■□□ 2.98
Tpm1-211ENSMUST00000113695 Pla2r1Q62028 1487 aa33.66■■■□□ 2.98
Tpm1-211ENSMUST00000113695 AqrQ8CFQ3 1481 aaKnown RBP33.62■■■□□ 2.97
Tpm1-211ENSMUST00000113695 Carmil1Q6EDY6 1374 aa33.58■■■□□ 2.97
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms