RNA–Protein interactions for RNA: ENSMUST00000106481.8

Tsen54-202, Transcript of tRNA-splicing endonuclease subunit Sen54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tsen54, Length 1,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54-202ENSMUST00000106481 Anapc11Q9CPX9 84 aa11.55□□□□□ -0.56
Tsen54-202ENSMUST00000106481 Stard9Q80TF6 4561 aa11.52□□□□□ -0.56
Tsen54-202ENSMUST00000106481 Pkd1O08852 4293 aa11.5□□□□□ -0.57
Tsen54-202ENSMUST00000106481 Coa6Q8BGD8 79 aa11.49□□□□□ -0.57
Tsen54-202ENSMUST00000106481 Igkv3-3A0A140T8Q0 119 aa11.48□□□□□ -0.57
Tsen54-202ENSMUST00000106481 ApobE9Q414 4505 aa11.47□□□□□ -0.57
Tsen54-202ENSMUST00000106481 Rps28P62858 69 aaKnown RBP11.46□□□□□ -0.57
Tsen54-202ENSMUST00000106481 Atox1O08997 68 aaKnown RBP11.46□□□□□ -0.58
Tsen54-202ENSMUST00000106481 Gm2696A0A1W2P709 240 aa11.42□□□□□ -0.58
Tsen54-202ENSMUST00000106481 Hectd4E9Q2E4 4418 aa11.42□□□□□ -0.58
Tsen54-202ENSMUST00000106481 Pet100P0DJE0 76 aa11.41□□□□□ -0.58
Tsen54-202ENSMUST00000106481 Spint4Q9D263 159 aa11.41□□□□□ -0.58
Tsen54-202ENSMUST00000106481 1700074P13RikQ9D9G7 251 aa11.4□□□□□ -0.58
Tsen54-202ENSMUST00000106481 Dync1h1Q9JHU4 4644 aaKnown RBP11.38□□□□□ -0.59
Tsen54-202ENSMUST00000106481 Mrpl55Q9CZ83 127 aa11.38□□□□□ -0.59
Tsen54-202ENSMUST00000106481 Dph3Q8K0W9 82 aa11.34□□□□□ -0.59
Tsen54-202ENSMUST00000106481 Spaca4Q80ZQ0 127 aa11.32□□□□□ -0.6
Tsen54-202ENSMUST00000106481 Cypt15B1AXS0 87 aa11.29□□□□□ -0.6
Tsen54-202ENSMUST00000106481 Serp1Q9Z1W5 66 aa11.29□□□□□ -0.6
Tsen54-202ENSMUST00000106481 SnurfQ9WU12 71 aa11.29□□□□□ -0.6
Tsen54-202ENSMUST00000106481 Fat1A0A1L1SQU7 4645 aa11.29□□□□□ -0.6
Tsen54-202ENSMUST00000106481 SacsQ9JLC8 4582 aa11.29□□□□□ -0.6
Tsen54-202ENSMUST00000106481 Pkhd1E9PZ36 4059 aa11.25□□□□□ -0.61
Tsen54-202ENSMUST00000106481 Defb12Q8K4N3 78 aa11.25□□□□□ -0.61
Tsen54-202ENSMUST00000106481 Lrp1bQ9JI18 4599 aa11.24□□□□□ -0.61
Tsen54-202ENSMUST00000106481 Gm10267M0QWD8 85 aa11.21□□□□□ -0.61
Tsen54-202ENSMUST00000106481 Brk1Q91VR8 75 aa11.2□□□□□ -0.62
Tsen54-202ENSMUST00000106481 Coa5Q99M07 74 aa11.19□□□□□ -0.62
Tsen54-202ENSMUST00000106481 Defb13Q8R2I4 64 aa11.18□□□□□ -0.62
Tsen54-202ENSMUST00000106481 Rps29P62274 56 aa11.17□□□□□ -0.62
Tsen54-202ENSMUST00000106481 Chtf8P0CG14 533 aa11.14□□□□□ -0.63
Tsen54-202ENSMUST00000106481 Cdc42se1Q8BHL7 80 aa11.14□□□□□ -0.63
Tsen54-202ENSMUST00000106481 Gm10160F6Y577 67 aa11.1□□□□□ -0.63
Tsen54-202ENSMUST00000106481 RetnlbQ99P86 105 aa11.08□□□□□ -0.64
Tsen54-202ENSMUST00000106481 Fat2Q5F226 4351 aa11.06□□□□□ -0.64
Tsen54-202ENSMUST00000106481 Gm10643Q3URG9 111 aa11.02□□□□□ -0.64
Tsen54-202ENSMUST00000106481 Kmt2cQ8BRH4 4903 aa11.01□□□□□ -0.65
Tsen54-202ENSMUST00000106481 H2al1aQ5M8Q2 105 aa11.01□□□□□ -0.65
Tsen54-202ENSMUST00000106481 A530084C06RikQ3UTW2 186 aa10.96□□□□□ -0.65
Tsen54-202ENSMUST00000106481 Gm26620Q9CY65 116 aa10.95□□□□□ -0.66
Tsen54-202ENSMUST00000106481 SvipQ3UZP4 77 aa10.93□□□□□ -0.66
Tsen54-202ENSMUST00000106481 Dnah8Q91XQ0 4731 aa10.93□□□□□ -0.66
Tsen54-202ENSMUST00000106481 Pkhd1l1Q80ZA4 4249 aa10.93□□□□□ -0.66
Tsen54-202ENSMUST00000106481 Gm10197F6QEY5 67 aa10.92□□□□□ -0.66
Tsen54-202ENSMUST00000106481 Herc2Q4U2R1 4836 aa10.89□□□□□ -0.67
Tsen54-202ENSMUST00000106481 Defb38Q7TNV7 63 aa10.87□□□□□ -0.67
Tsen54-202ENSMUST00000106481 Vps13bQ80TY5 3993 aa10.87□□□□□ -0.67
Tsen54-202ENSMUST00000106481 Phxr4P15974 95 aa10.83□□□□□ -0.68
Tsen54-202ENSMUST00000106481 Gm21798J3QNU5 87 aa10.81□□□□□ -0.68
Tsen54-202ENSMUST00000106481 Birc6O88738 4882 aa10.8□□□□□ -0.68
Tsen54-202ENSMUST00000106481 Krtap19-5O08632 62 aa10.78□□□□□ -0.68
Tsen54-202ENSMUST00000106481 Gm11939A2A592 99 aa10.74□□□□□ -0.69
Tsen54-202ENSMUST00000106481 Gm10999F6Q4M4 69 aa10.74□□□□□ -0.69
Tsen54-202ENSMUST00000106481 Kiaa1109A2AAE1 5005 aa10.74□□□□□ -0.69
Tsen54-202ENSMUST00000106481 Krtap3-2Q9D638 99 aa10.74□□□□□ -0.69
Tsen54-202ENSMUST00000106481 Krtap3-3Q9D7P0 99 aa10.74□□□□□ -0.69
Tsen54-202ENSMUST00000106481 Abca13Q5SSE9 5034 aa10.73□□□□□ -0.69
Tsen54-202ENSMUST00000106481 Q8BGJ3 129 aa10.71□□□□□ -0.69
Tsen54-202ENSMUST00000106481 H2al1eQ810S6 105 aa10.7□□□□□ -0.7
Tsen54-202ENSMUST00000106481 Gm20661K7N787 53 aa10.69□□□□□ -0.7
Tsen54-202ENSMUST00000106481 A930033H14RikG5E8X6 103 aa10.68□□□□□ -0.7
Tsen54-202ENSMUST00000106481 D6Ertd527eA0A0N4SWI3 464 aa10.68□□□□□ -0.7
Tsen54-202ENSMUST00000106481 2310034C09RikQ9D746 214 aa10.66□□□□□ -0.7
Tsen54-202ENSMUST00000106481 Gm10337F7DEP7 55 aa10.65□□□□□ -0.7
Tsen54-202ENSMUST00000106481 Fat3Q8BNA6 4555 aa10.65□□□□□ -0.71
Tsen54-202ENSMUST00000106481 4930507D05RikQ8C9C9 103 aa10.64□□□□□ -0.71
Tsen54-202ENSMUST00000106481 Lrp1Q91ZX7 4545 aaKnown RBP10.63□□□□□ -0.71
Tsen54-202ENSMUST00000106481 Gm5767A0A0J9YTU8 78 aa10.62□□□□□ -0.71
Tsen54-202ENSMUST00000106481 Sox16Q62247 57 aa10.62□□□□□ -0.71
Tsen54-202ENSMUST00000106481 Ndufb1P0DN34 57 aa10.61□□□□□ -0.71
Tsen54-202ENSMUST00000106481 2310079G19RikQ9D6L6 185 aa10.59□□□□□ -0.71
Tsen54-202ENSMUST00000106481 H2al1bA0A087WP11 105 aa10.59□□□□□ -0.71
Tsen54-202ENSMUST00000106481 HydinQ80W93 5154 aa10.58□□□□□ -0.72
Tsen54-202ENSMUST00000106481 Gm4491E0CX42 125 aa10.57□□□□□ -0.72
Tsen54-202ENSMUST00000106481 H2al1kJ3QP08 105 aa10.57□□□□□ -0.72
Tsen54-202ENSMUST00000106481 H2al1mQ9DAD9 105 aa10.57□□□□□ -0.72
Tsen54-202ENSMUST00000106481 Dnhd1D3Z2X2 4750 aa10.57□□□□□ -0.72
Tsen54-202ENSMUST00000106481 PcloQ9QYX7 5068 aa10.55□□□□□ -0.72
Tsen54-202ENSMUST00000106481 Limd2Q8BGB5 128 aa10.55□□□□□ -0.72
Tsen54-202ENSMUST00000106481 Uqcr11Q9CPX8 56 aa10.55□□□□□ -0.72
Tsen54-202ENSMUST00000106481 SptssbQ925E8 76 aa10.53□□□□□ -0.72
Tsen54-202ENSMUST00000106481 9230102O04RikA2ASX7 82 aa10.47□□□□□ -0.73
Tsen54-202ENSMUST00000106481 Lce1mQ9CR91 182 aa10.47□□□□□ -0.73
Tsen54-202ENSMUST00000106481 Mycbp2Q7TPH6 4711 aa10.42□□□□□ -0.74
Tsen54-202ENSMUST00000106481 Gm9736A0A1W2P7N1 277 aa10.36□□□□□ -0.75
Tsen54-202ENSMUST00000106481 4933415A04RikQ9D443 101 aa10.36□□□□□ -0.75
Tsen54-202ENSMUST00000106481 Rpl37Q9D823 97 aa10.33□□□□□ -0.76
Tsen54-202ENSMUST00000106481 Gm5965D3Z724 196 aa10.32□□□□□ -0.76
Tsen54-202ENSMUST00000106481 Defb1P56386 69 aa10.3□□□□□ -0.76
Tsen54-202ENSMUST00000106481 Rnase13Q5GAM7 153 aa10.29□□□□□ -0.76
Tsen54-202ENSMUST00000106481 Herc1E9PZP8 4859 aa10.27□□□□□ -0.76
Tsen54-202ENSMUST00000106481 Krtap15-1Q9QZU5 150 aa10.24□□□□□ -0.77
Tsen54-202ENSMUST00000106481 Gm9821Q8K076 103 aa10.22□□□□□ -0.77
Tsen54-202ENSMUST00000106481 Lrp2A2ARV4 4660 aa10.2□□□□□ -0.78
Tsen54-202ENSMUST00000106481 Cox6b2Q80ZN9 88 aa10.15□□□□□ -0.79
Tsen54-202ENSMUST00000106481 Gm18596A0A1W2P860 280 aa10.14□□□□□ -0.79
Tsen54-202ENSMUST00000106481 Gm17416Q30KP4 66 aa10.13□□□□□ -0.79
Tsen54-202ENSMUST00000106481 Sec61gP60060 68 aa10.08□□□□□ -0.8
Tsen54-202ENSMUST00000106481 Gm17606F6ZL36 78 aa9.93□□□□□ -0.82
Tsen54-202ENSMUST00000106481 Gm3646F6S692 53 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms