RNA–Protein interactions for RNA: ENSMUST00000098036.8

Cln3-203, Transcript of Battenin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cln3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-203ENSMUST00000098036 Ndufc1Q9CQY9 76 aa8.01□□□□□ -1.13
Cln3-203ENSMUST00000098036 Lrp1Q91ZX7 4545 aaKnown RBP7.99□□□□□ -1.13
Cln3-203ENSMUST00000098036 Igkv8-19A0A0G2JFN8 121 aa7.99□□□□□ -1.13
Cln3-203ENSMUST00000098036 HydinQ80W93 5154 aa7.97□□□□□ -1.13
Cln3-203ENSMUST00000098036 PcloQ9QYX7 5068 aa7.97□□□□□ -1.13
Cln3-203ENSMUST00000098036 Cystm1Q8K353 104 aa7.97□□□□□ -1.13
Cln3-203ENSMUST00000098036 Reg3aO09037 175 aa7.94□□□□□ -1.14
Cln3-203ENSMUST00000098036 Mycbp2Q7TPH6 4711 aa7.94□□□□□ -1.14
Cln3-203ENSMUST00000098036 Prr15lQ8JZM2 100 aa7.93□□□□□ -1.14
Cln3-203ENSMUST00000098036 Scgb1b2O35176 93 aa7.92□□□□□ -1.14
Cln3-203ENSMUST00000098036 Defb12Q8K4N3 78 aa7.9□□□□□ -1.14
Cln3-203ENSMUST00000098036 7530416G11RikJ3QJX6 159 aa7.89□□□□□ -1.15
Cln3-203ENSMUST00000098036 Serp2Q6TAW2 65 aa7.88□□□□□ -1.15
Cln3-203ENSMUST00000098036 4930518I15RikQ3V2W7 57 aa7.88□□□□□ -1.15
Cln3-203ENSMUST00000098036 Fam229bQ8CF36 80 aa7.88□□□□□ -1.15
Cln3-203ENSMUST00000098036 Spaca4Q80ZQ0 127 aa7.87□□□□□ -1.15
Cln3-203ENSMUST00000098036 Gm2310J3QNJ2 377 aa7.85□□□□□ -1.15
Cln3-203ENSMUST00000098036 Dph3Q8K0W9 82 aa7.84□□□□□ -1.15
Cln3-203ENSMUST00000098036 Igkv3-3A0A140T8Q0 119 aa7.82□□□□□ -1.16
Cln3-203ENSMUST00000098036 Samd13D3YUG0 102 aa7.82□□□□□ -1.16
Cln3-203ENSMUST00000098036 A0A286YE49 62 aa7.81□□□□□ -1.16
Cln3-203ENSMUST00000098036 GhrhP16043 103 aa7.81□□□□□ -1.16
Cln3-203ENSMUST00000098036 Rps29P62274 56 aa7.81□□□□□ -1.16
Cln3-203ENSMUST00000098036 D6Ertd527eA0A0N4SWI3 464 aa7.8□□□□□ -1.16
Cln3-203ENSMUST00000098036 Defa21Q8C1P2 93 aa7.8□□□□□ -1.16
Cln3-203ENSMUST00000098036 Naa38Q9D2U5 125 aa7.8□□□□□ -1.16
Cln3-203ENSMUST00000098036 Spink8Q09TK9 105 aa7.8□□□□□ -1.16
Cln3-203ENSMUST00000098036 Gm18596A0A1W2P860 280 aa7.79□□□□□ -1.16
Cln3-203ENSMUST00000098036 Cypt15B1AXS0 87 aa7.78□□□□□ -1.16
Cln3-203ENSMUST00000098036 A530084C06RikQ3UTW2 186 aa7.77□□□□□ -1.17
Cln3-203ENSMUST00000098036 Apoc4Q61268 124 aa7.76□□□□□ -1.17
Cln3-203ENSMUST00000098036 Herc1E9PZP8 4859 aa7.76□□□□□ -1.17
Cln3-203ENSMUST00000098036 Prr13Q9CQJ5 137 aa7.75□□□□□ -1.17
Cln3-203ENSMUST00000098036 B230307C23RikQ8BLB2 64 aa7.72□□□□□ -1.17
Cln3-203ENSMUST00000098036 BikO70337 150 aa7.7□□□□□ -1.18
Cln3-203ENSMUST00000098036 Lrp2A2ARV4 4660 aa7.69□□□□□ -1.18
Cln3-203ENSMUST00000098036 Gm9736A0A1W2P7N1 277 aa7.68□□□□□ -1.18
Cln3-203ENSMUST00000098036 1700074P13RikQ9D9G7 251 aa7.67□□□□□ -1.18
Cln3-203ENSMUST00000098036 Defb13Q8R2I4 64 aa7.63□□□□□ -1.19
Cln3-203ENSMUST00000098036 Atox1O08997 68 aaKnown RBP7.63□□□□□ -1.19
Cln3-203ENSMUST00000098036 Coa6Q8BGD8 79 aa7.63□□□□□ -1.19
Cln3-203ENSMUST00000098036 Gm28539A0A087WSL9 92 aa7.61□□□□□ -1.19
Cln3-203ENSMUST00000098036 Gm10267M0QWD8 85 aa7.59□□□□□ -1.2
Cln3-203ENSMUST00000098036 Tmem258P61166 79 aa7.59□□□□□ -1.2
Cln3-203ENSMUST00000098036 Gm26620Q9CY65 116 aa7.59□□□□□ -1.2
Cln3-203ENSMUST00000098036 Spint4Q9D263 159 aa7.59□□□□□ -1.2
Cln3-203ENSMUST00000098036 Smlr1J3QMJ4 66 aa7.57□□□□□ -1.2
Cln3-203ENSMUST00000098036 Gm19935A0A1B0GSF9 52 aa7.54□□□□□ -1.2
Cln3-203ENSMUST00000098036 Gm11939A2A592 99 aa7.52□□□□□ -1.21
Cln3-203ENSMUST00000098036 SmcpP15265 143 aa7.52□□□□□ -1.21
Cln3-203ENSMUST00000098036 A930033H14RikG5E8X6 103 aa7.5□□□□□ -1.21
Cln3-203ENSMUST00000098036 Chtf8P0CG14 533 aa7.47□□□□□ -1.21
Cln3-203ENSMUST00000098036 Pet100P0DJE0 76 aa7.44□□□□□ -1.22
Cln3-203ENSMUST00000098036 Gm5767A0A0J9YTU8 78 aa7.43□□□□□ -1.22
Cln3-203ENSMUST00000098036 Gm10160F6Y577 67 aa7.43□□□□□ -1.22
Cln3-203ENSMUST00000098036 Prm1P02319 51 aa7.42□□□□□ -1.22
Cln3-203ENSMUST00000098036 Ush2AQ2QI47 5193 aa7.42□□□□□ -1.22
Cln3-203ENSMUST00000098036 Krtap3-2Q9D638 99 aa7.42□□□□□ -1.22
Cln3-203ENSMUST00000098036 Krtap3-3Q9D7P0 99 aa7.42□□□□□ -1.22
Cln3-203ENSMUST00000098036 Coa5Q99M07 74 aa7.41□□□□□ -1.22
Cln3-203ENSMUST00000098036 Gm5965D3Z724 196 aa7.4□□□□□ -1.22
Cln3-203ENSMUST00000098036 Gm7735D3YX18 52 aa7.39□□□□□ -1.23
Cln3-203ENSMUST00000098036 SnurfQ9WU12 71 aa7.39□□□□□ -1.23
Cln3-203ENSMUST00000098036 Smim20D3Z7Q2 69 aa7.38□□□□□ -1.23
Cln3-203ENSMUST00000098036 Gm10643Q3URG9 111 aa7.38□□□□□ -1.23
Cln3-203ENSMUST00000098036 Rps28P62858 69 aaKnown RBP7.37□□□□□ -1.23
Cln3-203ENSMUST00000098036 Gm9789Q8BIG3 52 aa7.35□□□□□ -1.23
Cln3-203ENSMUST00000098036 Serp1Q9Z1W5 66 aa7.33□□□□□ -1.24
Cln3-203ENSMUST00000098036 Defb38Q7TNV7 63 aa7.33□□□□□ -1.24
Cln3-203ENSMUST00000098036 Cdc42se1Q8BHL7 80 aa7.32□□□□□ -1.24
Cln3-203ENSMUST00000098036 Gm10999F6Q4M4 69 aa7.29□□□□□ -1.24
Cln3-203ENSMUST00000098036 Gm21798J3QNU5 87 aa7.29□□□□□ -1.24
Cln3-203ENSMUST00000098036 Hmcn2A2AJ76 5100 aa7.29□□□□□ -1.24
Cln3-203ENSMUST00000098036 Q8BGJ3 129 aa7.29□□□□□ -1.24
Cln3-203ENSMUST00000098036 Gm4491E0CX42 125 aa7.27□□□□□ -1.25
Cln3-203ENSMUST00000098036 Brk1Q91VR8 75 aa7.26□□□□□ -1.25
Cln3-203ENSMUST00000098036 Ubr4A2AN08 5180 aa7.26□□□□□ -1.25
Cln3-203ENSMUST00000098036 4932415D10RikA0A1W2P6U8 4986 aa7.24□□□□□ -1.25
Cln3-203ENSMUST00000098036 2310034C09RikQ9D746 214 aa7.24□□□□□ -1.25
Cln3-203ENSMUST00000098036 Rpl37Q9D823 97 aa7.24□□□□□ -1.25
Cln3-203ENSMUST00000098036 4930507D05RikQ8C9C9 103 aa7.21□□□□□ -1.25
Cln3-203ENSMUST00000098036 Gm9821Q8K076 103 aa7.21□□□□□ -1.25
Cln3-203ENSMUST00000098036 2310079G19RikQ9D6L6 185 aa7.21□□□□□ -1.25
Cln3-203ENSMUST00000098036 Krtap15-1Q9QZU5 150 aa7.2□□□□□ -1.26
Cln3-203ENSMUST00000098036 9230102O04RikA2ASX7 82 aa7.18□□□□□ -1.26
Cln3-203ENSMUST00000098036 Gm10197F6QEY5 67 aa7.16□□□□□ -1.26
Cln3-203ENSMUST00000098036 Rnase13Q5GAM7 153 aa7.15□□□□□ -1.27
Cln3-203ENSMUST00000098036 Phxr4P15974 95 aa7.12□□□□□ -1.27
Cln3-203ENSMUST00000098036 Gm20661K7N787 53 aa7.09□□□□□ -1.27
Cln3-203ENSMUST00000098036 H2al1aQ5M8Q2 105 aa7.07□□□□□ -1.28
Cln3-203ENSMUST00000098036 H2al1eQ810S6 105 aa7.07□□□□□ -1.28
Cln3-203ENSMUST00000098036 SptssbQ925E8 76 aa7.06□□□□□ -1.28
Cln3-203ENSMUST00000098036 Gm17416Q30KP4 66 aa7.05□□□□□ -1.28
Cln3-203ENSMUST00000098036 2310057N15RikQ9D6T8 200 aa7.05□□□□□ -1.28
Cln3-203ENSMUST00000098036 Sec61bQ9CQS8 96 aaKnown RBP7.02□□□□□ -1.29
Cln3-203ENSMUST00000098036 Uqcr11Q9CPX8 56 aa6.98□□□□□ -1.29
Cln3-203ENSMUST00000098036 H2al1bA0A087WP11 105 aa6.96□□□□□ -1.29
Cln3-203ENSMUST00000098036 Ndufb1P0DN34 57 aa6.96□□□□□ -1.29
Cln3-203ENSMUST00000098036 Limd2Q8BGB5 128 aa6.96□□□□□ -1.29
Cln3-203ENSMUST00000098036 Defb1P56386 69 aa6.95□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms