RNA–Protein interactions for RNA: ENSMUST00000093132.12

Clk4-201, Transcript of Dual specificity protein kinase CLK4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-201ENSMUST00000093132 Gm9736A0A1W2P7N1 277 aa10.04□□□□□ -0.8
Clk4-201ENSMUST00000093132 Trav3-1Q5R1I8 114 aa10.01□□□□□ -0.81
Clk4-201ENSMUST00000093132 Reg3aO09037 175 aa9.99□□□□□ -0.81
Clk4-201ENSMUST00000093132 Tmem254aP0DN89 123 aa9.99□□□□□ -0.81
Clk4-201ENSMUST00000093132 Tmem254bP0DN90 123 aa9.99□□□□□ -0.81
Clk4-201ENSMUST00000093132 Tmem254cP0DN91 123 aa9.99□□□□□ -0.81
Clk4-201ENSMUST00000093132 Lce1mQ9CR91 182 aa9.97□□□□□ -0.81
Clk4-201ENSMUST00000093132 Lrp2A2ARV4 4660 aa9.93□□□□□ -0.82
Clk4-201ENSMUST00000093132 Igkv8-19A0A0G2JFN8 121 aa9.92□□□□□ -0.82
Clk4-201ENSMUST00000093132 Cypt15B1AXS0 87 aa9.92□□□□□ -0.82
Clk4-201ENSMUST00000093132 Defa21Q8C1P2 93 aa9.9□□□□□ -0.82
Clk4-201ENSMUST00000093132 BatfO35284 125 aa9.89□□□□□ -0.83
Clk4-201ENSMUST00000093132 Hist1h4aP62806 103 aaKnown RBP9.84□□□□□ -0.83
Clk4-201ENSMUST00000093132 Igkv3-3A0A140T8Q0 119 aa9.82□□□□□ -0.84
Clk4-201ENSMUST00000093132 Prr15lQ8JZM2 100 aa9.8□□□□□ -0.84
Clk4-201ENSMUST00000093132 Herc1E9PZP8 4859 aa9.8□□□□□ -0.84
Clk4-201ENSMUST00000093132 Gm11939A2A592 99 aa9.8□□□□□ -0.84
Clk4-201ENSMUST00000093132 Gm5965D3Z724 196 aa9.78□□□□□ -0.84
Clk4-201ENSMUST00000093132 Cystm1Q8K353 104 aa9.75□□□□□ -0.85
Clk4-201ENSMUST00000093132 GhrhP16043 103 aa9.74□□□□□ -0.85
Clk4-201ENSMUST00000093132 Gm26620Q9CY65 116 aa9.73□□□□□ -0.85
Clk4-201ENSMUST00000093132 Gm5767A0A0J9YTU8 78 aa9.72□□□□□ -0.85
Clk4-201ENSMUST00000093132 BikO70337 150 aa9.7□□□□□ -0.86
Clk4-201ENSMUST00000093132 Atp5eP56382 52 aa9.69□□□□□ -0.86
Clk4-201ENSMUST00000093132 Fam229bQ8CF36 80 aa9.68□□□□□ -0.86
Clk4-201ENSMUST00000093132 Defb13Q8R2I4 64 aa9.66□□□□□ -0.86
Clk4-201ENSMUST00000093132 A0A286YE49 62 aa9.66□□□□□ -0.86
Clk4-201ENSMUST00000093132 Samd13D3YUG0 102 aa9.64□□□□□ -0.87
Clk4-201ENSMUST00000093132 Gm10267M0QWD8 85 aa9.64□□□□□ -0.87
Clk4-201ENSMUST00000093132 Spink8Q09TK9 105 aa9.63□□□□□ -0.87
Clk4-201ENSMUST00000093132 Ndufc1Q9CQY9 76 aa9.62□□□□□ -0.87
Clk4-201ENSMUST00000093132 A930033H14RikG5E8X6 103 aa9.61□□□□□ -0.87
Clk4-201ENSMUST00000093132 Gm18596A0A1W2P860 280 aa9.58□□□□□ -0.88
Clk4-201ENSMUST00000093132 Naa38Q9D2U5 125 aa9.56□□□□□ -0.88
Clk4-201ENSMUST00000093132 Scgb1b2O35176 93 aa9.54□□□□□ -0.88
Clk4-201ENSMUST00000093132 Anapc13Q8R034 74 aa9.52□□□□□ -0.89
Clk4-201ENSMUST00000093132 Gm9821Q8K076 103 aa9.51□□□□□ -0.89
Clk4-201ENSMUST00000093132 Krtap15-1Q9QZU5 150 aa9.49□□□□□ -0.89
Clk4-201ENSMUST00000093132 1700074P13RikQ9D9G7 251 aa9.48□□□□□ -0.89
Clk4-201ENSMUST00000093132 7530416G11RikJ3QJX6 159 aa9.47□□□□□ -0.89
Clk4-201ENSMUST00000093132 4930518I15RikQ3V2W7 57 aa9.46□□□□□ -0.89
Clk4-201ENSMUST00000093132 Krtap3-2Q9D638 99 aa9.46□□□□□ -0.89
Clk4-201ENSMUST00000093132 Krtap3-3Q9D7P0 99 aa9.46□□□□□ -0.89
Clk4-201ENSMUST00000093132 Rpl37Q9D823 97 aa9.43□□□□□ -0.9
Clk4-201ENSMUST00000093132 Serp2Q6TAW2 65 aa9.39□□□□□ -0.91
Clk4-201ENSMUST00000093132 Ush2AQ2QI47 5193 aa9.36□□□□□ -0.91
Clk4-201ENSMUST00000093132 Prm1P02319 51 aa9.3□□□□□ -0.92
Clk4-201ENSMUST00000093132 B230307C23RikQ8BLB2 64 aa9.28□□□□□ -0.92
Clk4-201ENSMUST00000093132 Atox1O08997 68 aaKnown RBP9.26□□□□□ -0.93
Clk4-201ENSMUST00000093132 Gm9789Q8BIG3 52 aa9.26□□□□□ -0.93
Clk4-201ENSMUST00000093132 Gm4491E0CX42 125 aa9.25□□□□□ -0.93
Clk4-201ENSMUST00000093132 Hmcn2A2AJ76 5100 aa9.25□□□□□ -0.93
Clk4-201ENSMUST00000093132 Apoc4Q61268 124 aa9.25□□□□□ -0.93
Clk4-201ENSMUST00000093132 Sec61bQ9CQS8 96 aaKnown RBP9.25□□□□□ -0.93
Clk4-201ENSMUST00000093132 Rnase13Q5GAM7 153 aa9.24□□□□□ -0.93
Clk4-201ENSMUST00000093132 Gm7735D3YX18 52 aa9.23□□□□□ -0.93
Clk4-201ENSMUST00000093132 Coa6Q8BGD8 79 aa9.23□□□□□ -0.93
Clk4-201ENSMUST00000093132 Chtf8P0CG14 533 aa9.21□□□□□ -0.94
Clk4-201ENSMUST00000093132 Spint4Q9D263 159 aa9.21□□□□□ -0.94
Clk4-201ENSMUST00000093132 2310034C09RikQ9D746 214 aa9.2□□□□□ -0.94
Clk4-201ENSMUST00000093132 2310057N15RikQ9D6T8 200 aa9.19□□□□□ -0.94
Clk4-201ENSMUST00000093132 Gm28539A0A087WSL9 92 aa9.19□□□□□ -0.94
Clk4-201ENSMUST00000093132 Defb38Q7TNV7 63 aa9.19□□□□□ -0.94
Clk4-201ENSMUST00000093132 Gm10999F6Q4M4 69 aa9.17□□□□□ -0.94
Clk4-201ENSMUST00000093132 Q8BGJ3 129 aa9.17□□□□□ -0.94
Clk4-201ENSMUST00000093132 Ubr4A2AN08 5180 aa9.15□□□□□ -0.95
Clk4-201ENSMUST00000093132 Gm10160F6Y577 67 aa9.11□□□□□ -0.95
Clk4-201ENSMUST00000093132 Gm21798J3QNU5 87 aa9.09□□□□□ -0.95
Clk4-201ENSMUST00000093132 Gm17416Q30KP4 66 aa9.07□□□□□ -0.96
Clk4-201ENSMUST00000093132 2310079G19RikQ9D6L6 185 aa9.03□□□□□ -0.96
Clk4-201ENSMUST00000093132 Prr13Q9CQJ5 137 aa9.02□□□□□ -0.97
Clk4-201ENSMUST00000093132 9230102O04RikA2ASX7 82 aa9.01□□□□□ -0.97
Clk4-201ENSMUST00000093132 4930507D05RikQ8C9C9 103 aa9□□□□□ -0.97
Clk4-201ENSMUST00000093132 4932415D10RikA0A1W2P6U8 4986 aa9□□□□□ -0.97
Clk4-201ENSMUST00000093132 Gm10643Q3URG9 111 aa8.97□□□□□ -0.97
Clk4-201ENSMUST00000093132 Coa5Q99M07 74 aa8.96□□□□□ -0.97
Clk4-201ENSMUST00000093132 Krtap1-3A2A588 173 aa8.93□□□□□ -0.98
Clk4-201ENSMUST00000093132 Crct1Q6PAI5 102 aa8.93□□□□□ -0.98
Clk4-201ENSMUST00000093132 Smlr1J3QMJ4 66 aa8.92□□□□□ -0.98
Clk4-201ENSMUST00000093132 Krtap16-3Q8C1I6 86 aa8.9□□□□□ -0.99
Clk4-201ENSMUST00000093132 Tmem258P61166 79 aa8.86□□□□□ -0.99
Clk4-201ENSMUST00000093132 Krtap19-1Q925H2 87 aa8.84□□□□□ -0.99
Clk4-201ENSMUST00000093132 Krtap19-3Q925H6 87 aa8.82□□□□□ -1
Clk4-201ENSMUST00000093132 SnurfQ9WU12 71 aa8.82□□□□□ -1
Clk4-201ENSMUST00000093132 ZanO88799 5376 aa8.82□□□□□ -1
Clk4-201ENSMUST00000093132 Fam229aB2KGE5 128 aa8.8□□□□□ -1
Clk4-201ENSMUST00000093132 Pet100P0DJE0 76 aa8.79□□□□□ -1
Clk4-201ENSMUST00000093132 Gm19935A0A1B0GSF9 52 aa8.78□□□□□ -1
Clk4-201ENSMUST00000093132 2210017I01RikA0A0A6YVV1 95 aa8.76□□□□□ -1.01
Clk4-201ENSMUST00000093132 Defb1P56386 69 aa8.75□□□□□ -1.01
Clk4-201ENSMUST00000093132 Krtap13-1Q8K198 168 aa8.73□□□□□ -1.01
Clk4-201ENSMUST00000093132 Gm10318A0A1W2P728 225 aa8.71□□□□□ -1.02
Clk4-201ENSMUST00000093132 Cdc42se1Q8BHL7 80 aa8.68□□□□□ -1.02
Clk4-201ENSMUST00000093132 Fat4Q2PZL6 4981 aa8.68□□□□□ -1.02
Clk4-201ENSMUST00000093132 A0A1Y7VJH8 109 aa8.68□□□□□ -1.02
Clk4-201ENSMUST00000093132 SmcpP15265 143 aa8.68□□□□□ -1.02
Clk4-201ENSMUST00000093132 LorP18165 486 aa8.67□□□□□ -1.02
Clk4-201ENSMUST00000093132 SptssbQ925E8 76 aa8.66□□□□□ -1.02
Clk4-201ENSMUST00000093132 Gm19402J3QJV4 266 aa8.65□□□□□ -1.02
Clk4-201ENSMUST00000093132 Cox6b2Q80ZN9 88 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms