RNA–Protein interactions for RNA: ENSMUST00000093132.12

Clk4-201, Transcript of Dual specificity protein kinase CLK4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-201ENSMUST00000093132 Gm35339A0A140LHH9 1649 aa38.01■■■■□ 3.68
Clk4-201ENSMUST00000093132 NischQ80TM9 1593 aa37.86■■■■□ 3.65
Clk4-201ENSMUST00000093132 Abcc9P70170 1546 aa36.71■■■■□ 3.47
Clk4-201ENSMUST00000093132 Abcc8B2RUS7 1588 aa36.4■■■■□ 3.42
Clk4-201ENSMUST00000093132 ScribQ80U72 1612 aa34.65■■■■□ 3.14
Clk4-201ENSMUST00000093132 Dcaf1Q80TR8 1506 aa33.75■■■□□ 2.99
Clk4-201ENSMUST00000093132 Kdm5dQ62240 1548 aa33.69■■■□□ 2.98
Clk4-201ENSMUST00000093132 NacadQ5SWP3 1504 aa33.67■■■□□ 2.98
Clk4-201ENSMUST00000093132 Rhox8Q6VSS7 320 aa33.43■■■□□ 2.94
Clk4-201ENSMUST00000093132 Rb1cc1Q9ESK9 1588 aa33.04■■■□□ 2.88
Clk4-201ENSMUST00000093132 Sycp2Q9CUU3 1500 aa32.98■■■□□ 2.87
Clk4-201ENSMUST00000093132 Ccdc180J3QNE4 1664 aa32.72■■■□□ 2.83
Clk4-201ENSMUST00000093132 Baz1aO88379 1555 aa32.65■■■□□ 2.82
Clk4-201ENSMUST00000093132 Crybg2B7ZCC2 1516 aa32.46■■■□□ 2.79
Clk4-201ENSMUST00000093132 BicraF8VPZ9 1578 aa32.4■■■□□ 2.78
Clk4-201ENSMUST00000093132 Zcchc6Q5BLK4 1491 aaKnown RBP32.03■■■□□ 2.72
Clk4-201ENSMUST00000093132 Rtl1Q7M732 1744 aa31.84■■■□□ 2.69
Clk4-201ENSMUST00000093132 Smarca2Q6DIC0 1577 aa31.78■■■□□ 2.68
Clk4-201ENSMUST00000093132 Cecr2E9Q2Z1 1453 aa31.37■■■□□ 2.61
Clk4-201ENSMUST00000093132 Pds5bQ4VA53 1446 aaKnown RBP31.34■■■□□ 2.61
Clk4-201ENSMUST00000093132 Smarca4Q3TKT4 1613 aaKnown RBP31.21■■■□□ 2.59
Clk4-201ENSMUST00000093132 Atad2bE9Q166 1460 aaKnown RBP31.2■■■□□ 2.59
Clk4-201ENSMUST00000093132 Ccdc136Q3TVA9 1136 aa31.18■■■□□ 2.58
Clk4-201ENSMUST00000093132 Iqgap2Q3UQ44 1575 aa30.94■■■□□ 2.54
Clk4-201ENSMUST00000093132 Brd4Q9ESU6 1400 aaKnown RBP30.94■■■□□ 2.54
Clk4-201ENSMUST00000093132 CftrP26361 1476 aa30.81■■■□□ 2.52
Clk4-201ENSMUST00000093132 Synj1Q8CHC4 1574 aa30.79■■■□□ 2.52
Clk4-201ENSMUST00000093132 Thoc2B1AZI6 1594 aaKnown RBP30.77■■■□□ 2.52
Clk4-201ENSMUST00000093132 Trim41Q5NCC3 630 aa30.77■■■□□ 2.52
Clk4-201ENSMUST00000093132 Cttnbp2B9EJA2 1648 aa30.72■■■□□ 2.51
Clk4-201ENSMUST00000093132 Ercc6F8VPZ5 1481 aa30.66■■■□□ 2.5
Clk4-201ENSMUST00000093132 Wdr62Q3U3T8 1523 aa30.57■■■□□ 2.48
Clk4-201ENSMUST00000093132 Frmpd1A2AKB4 1549 aa30.54■■■□□ 2.48
Clk4-201ENSMUST00000093132 Dnajc5bQ9CQ94 199 aa30.43■■■□□ 2.46
Clk4-201ENSMUST00000093132 Cc2d2aQ8CFW7 1633 aa30.32■■■□□ 2.44
Clk4-201ENSMUST00000093132 Esf1Q3V1V3 845 aaKnown RBP30.29■■■□□ 2.44
Clk4-201ENSMUST00000093132 Fam135aQ6NS59 1506 aa30.24■■■□□ 2.43
Clk4-201ENSMUST00000093132 Phldb1Q6PDH0 1371 aaKnown RBP30.2■■■□□ 2.43
Clk4-201ENSMUST00000093132 Golga3P55937 1487 aa30.12■■■□□ 2.41
Clk4-201ENSMUST00000093132 Unc13aQ4KUS2 1712 aa30.1■■■□□ 2.41
Clk4-201ENSMUST00000093132 Top2bQ64511 1612 aa29.97■■■□□ 2.39
Clk4-201ENSMUST00000093132 Cngb1E1AZ71 1325 aa29.94■■■□□ 2.38
Clk4-201ENSMUST00000093132 Baz1bQ9Z277 1479 aa29.92■■■□□ 2.38
Clk4-201ENSMUST00000093132 Ubl4bQ9CQ84 188 aa29.9■■■□□ 2.38
Clk4-201ENSMUST00000093132 Rsf1E9PWW9 1441 aaKnown RBP29.81■■■□□ 2.36
Clk4-201ENSMUST00000093132 Lamc3Q9R0B6 1581 aa29.73■■■□□ 2.35
Clk4-201ENSMUST00000093132 Kif15Q6P9L6 1387 aa29.69■■■□□ 2.34
Clk4-201ENSMUST00000093132 Fmn1Q05860 1466 aa29.62■■■□□ 2.33
Clk4-201ENSMUST00000093132 TnnQ80Z71 1560 aa29.61■■■□□ 2.33
Clk4-201ENSMUST00000093132 HrcG5E8J6 738 aa29.61■■■□□ 2.33
Clk4-201ENSMUST00000093132 Mrc2Q64449 1479 aa29.54■■■□□ 2.32
Clk4-201ENSMUST00000093132 Cux2P70298 1426 aa29.51■■■□□ 2.31
Clk4-201ENSMUST00000093132 Ccdc88bQ4QRL3 1481 aa29.5■■■□□ 2.31
Clk4-201ENSMUST00000093132 Chic1Q8CBW7 227 aa29.38■■■□□ 2.29
Clk4-201ENSMUST00000093132 Ccdc18Q640L5 1455 aa29.28■■■□□ 2.28
Clk4-201ENSMUST00000093132 Camsap1A2AHC3 1581 aa29.27■■■□□ 2.28
Clk4-201ENSMUST00000093132 Npm1Q61937 292 aaKnown RBP29.25■■■□□ 2.27
Clk4-201ENSMUST00000093132 Cep164Q5DU05 1446 aa29.22■■■□□ 2.27
Clk4-201ENSMUST00000093132 Top2aQ01320 1528 aaKnown RBP29.21■■■□□ 2.27
Clk4-201ENSMUST00000093132 Il27Q8K3I6 234 aa29.17■■■□□ 2.26
Clk4-201ENSMUST00000093132 Kif21aQ9QXL2 1672 aa29.07■■■□□ 2.24
Clk4-201ENSMUST00000093132 LrpprcQ6PB66 1392 aaKnown RBP29.04■■■□□ 2.24
Clk4-201ENSMUST00000093132 Grin2bQ01097 1482 aa28.96■■■□□ 2.23
Clk4-201ENSMUST00000093132 Dhx29Q6PGC1 1365 aaKnown RBP28.95■■■□□ 2.22
Clk4-201ENSMUST00000093132 PogzQ8BZH4 1409 aaKnown RBP28.92■■■□□ 2.22
Clk4-201ENSMUST00000093132 NrkQ9R0G8 1455 aa28.84■■■□□ 2.21
Clk4-201ENSMUST00000093132 Lrriq1Q0P5X1 1673 aa28.81■■■□□ 2.2
Clk4-201ENSMUST00000093132 Duox2A2AQ99 1517 aa28.81■■■□□ 2.2
Clk4-201ENSMUST00000093132 Crocc2F6XLV1 1638 aa28.79■■■□□ 2.2
Clk4-201ENSMUST00000093132 Efcab5A0JP43 1406 aa28.77■■■□□ 2.2
Clk4-201ENSMUST00000093132 Gab3Q8BSM5 595 aa28.75■■■□□ 2.19
Clk4-201ENSMUST00000093132 PtprkP35822 1457 aa28.72■■■□□ 2.19
Clk4-201ENSMUST00000093132 Shroom4Q1W617 1475 aa28.72■■■□□ 2.19
Clk4-201ENSMUST00000093132 Plb1Q3TTY0 1478 aa28.7■■■□□ 2.18
Clk4-201ENSMUST00000093132 Urb2E9Q7L1 1524 aaKnown RBP28.68■■■□□ 2.18
Clk4-201ENSMUST00000093132 Rapgef2Q8CHG7 1496 aa28.63■■■□□ 2.17
Clk4-201ENSMUST00000093132 Samd9lQ69Z37 1561 aa28.56■■■□□ 2.16
Clk4-201ENSMUST00000093132 Npm2Q80W85 207 aa28.54■■■□□ 2.16
Clk4-201ENSMUST00000093132 Ift140E9PY46 1464 aa28.49■■■□□ 2.15
Clk4-201ENSMUST00000093132 Cep162Q6ZQ06 1403 aa28.43■■■□□ 2.14
Clk4-201ENSMUST00000093132 Disp1Q3TDN0 1521 aa28.42■■■□□ 2.14
Clk4-201ENSMUST00000093132 Eif4g3Q80XI3 1579 aaKnown RBP28.41■■■□□ 2.14
Clk4-201ENSMUST00000093132 Mroh2bQ7M6Y6 1581 aa28.4■■■□□ 2.14
Clk4-201ENSMUST00000093132 Eif4g1Q6NZJ6 1600 aaKnown RBP28.38■■■□□ 2.13
Clk4-201ENSMUST00000093132 Arhgap35Q91YM2 1499 aa28.37■■■□□ 2.13
Clk4-201ENSMUST00000093132 Rad54l2Q99NG0 1466 aa28.36■■■□□ 2.13
Clk4-201ENSMUST00000093132 SynmQ70IV5 1561 aa28.35■■■□□ 2.13
Clk4-201ENSMUST00000093132 Zeb1Q64318 1117 aa28.33■■■□□ 2.13
Clk4-201ENSMUST00000093132 Map3k1P53349 1493 aa28.32■■■□□ 2.12
Clk4-201ENSMUST00000093132 Magi3Q9EQJ9 1476 aa28.28■■■□□ 2.12
Clk4-201ENSMUST00000093132 Nup160Q9Z0W3 1402 aaKnown RBP28.27■■■□□ 2.12
Clk4-201ENSMUST00000093132 Pbrm1Q8BSQ9 1634 aaKnown RBP28.27■■■□□ 2.12
Clk4-201ENSMUST00000093132 Grin2aP35436 1464 aa28.25■■■□□ 2.11
Clk4-201ENSMUST00000093132 Rusc2Q80U22 1514 aa28.21■■■□□ 2.11
Clk4-201ENSMUST00000093132 Setd1bQ8CFT2 1985 aa28.21■■■□□ 2.11
Clk4-201ENSMUST00000093132 Pla2r1Q62028 1487 aa28.19■■■□□ 2.1
Clk4-201ENSMUST00000093132 Cc2d2bA0A286YDU8 1405 aa28.18■■■□□ 2.1
Clk4-201ENSMUST00000093132 AqrQ8CFQ3 1481 aaKnown RBP28.17■■■□□ 2.1
Clk4-201ENSMUST00000093132 Myt1lP97500 1187 aa28.15■■■□□ 2.1
Clk4-201ENSMUST00000093132 Carmil1Q6EDY6 1374 aa28.15■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 89.6 ms