RNA–Protein interactions for RNA: ENSMUST00000001711.5

Hoxc6-201, Transcript of Homeobox protein Hox-C6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc6, Length 1,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6-201ENSMUST00000001711 Gm44790A0A0N4SV91 103 aa10.57□□□□□ -0.72
Hoxc6-201ENSMUST00000001711 Tmem213Q08EA8 116 aa10.54□□□□□ -0.72
Hoxc6-201ENSMUST00000001711 A930033H14RikG5E8X6 103 aa10.53□□□□□ -0.72
Hoxc6-201ENSMUST00000001711 Gm20604F8WIA3 75 aa10.52□□□□□ -0.72
Hoxc6-201ENSMUST00000001711 Ormdl1Q921I0 153 aa10.52□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 UqcrqQ9CQ69 82 aa10.52□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 Mrpl34Q99N91 92 aa10.51□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 Gm5965D3Z724 196 aa10.5□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 Gm37013Q8K491 104 aa10.49□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 Cystm1Q8K353 104 aa10.48□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 BatfO35284 125 aa10.47□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 C130032M10RikQ8C888 123 aa10.47□□□□□ -0.73
Hoxc6-201ENSMUST00000001711 Cdip1Q9DB75 208 aa10.45□□□□□ -0.74
Hoxc6-201ENSMUST00000001711 Gm5767A0A0J9YTU8 78 aa10.41□□□□□ -0.74
Hoxc6-201ENSMUST00000001711 Cypt15B1AXS0 87 aa10.39□□□□□ -0.75
Hoxc6-201ENSMUST00000001711 Defa21Q8C1P2 93 aa10.37□□□□□ -0.75
Hoxc6-201ENSMUST00000001711 Reg3aO09037 175 aa10.35□□□□□ -0.75
Hoxc6-201ENSMUST00000001711 Lyrm7Q9DA03 104 aa10.35□□□□□ -0.75
Hoxc6-201ENSMUST00000001711 Ubl5Q9EPV8 73 aa10.35□□□□□ -0.75
Hoxc6-201ENSMUST00000001711 MplkipQ9D011 178 aa10.34□□□□□ -0.75
Hoxc6-201ENSMUST00000001711 Prm1P02319 51 aa10.31□□□□□ -0.76
Hoxc6-201ENSMUST00000001711 Gm26620Q9CY65 116 aa10.28□□□□□ -0.76
Hoxc6-201ENSMUST00000001711 Krtap3-2Q9D638 99 aa10.27□□□□□ -0.76
Hoxc6-201ENSMUST00000001711 Krtap3-3Q9D7P0 99 aa10.27□□□□□ -0.76
Hoxc6-201ENSMUST00000001711 Anapc13Q8R034 74 aa10.25□□□□□ -0.77
Hoxc6-201ENSMUST00000001711 Igkv3-3A0A140T8Q0 119 aa10.23□□□□□ -0.77
Hoxc6-201ENSMUST00000001711 Gm7735D3YX18 52 aa10.23□□□□□ -0.77
Hoxc6-201ENSMUST00000001711 Gm9821Q8K076 103 aa10.23□□□□□ -0.77
Hoxc6-201ENSMUST00000001711 Ush2AQ2QI47 5193 aa10.23□□□□□ -0.77
Hoxc6-201ENSMUST00000001711 Gm9789Q8BIG3 52 aa10.22□□□□□ -0.77
Hoxc6-201ENSMUST00000001711 Igkv8-19A0A0G2JFN8 121 aa10.2□□□□□ -0.78
Hoxc6-201ENSMUST00000001711 Atp5eP56382 52 aa10.19□□□□□ -0.78
Hoxc6-201ENSMUST00000001711 BikO70337 150 aa10.16□□□□□ -0.78
Hoxc6-201ENSMUST00000001711 Krtap15-1Q9QZU5 150 aa10.15□□□□□ -0.78
Hoxc6-201ENSMUST00000001711 Tmem254aP0DN89 123 aa10.14□□□□□ -0.79
Hoxc6-201ENSMUST00000001711 Tmem254bP0DN90 123 aa10.14□□□□□ -0.79
Hoxc6-201ENSMUST00000001711 Tmem254cP0DN91 123 aa10.14□□□□□ -0.79
Hoxc6-201ENSMUST00000001711 Defb13Q8R2I4 64 aa10.1□□□□□ -0.79
Hoxc6-201ENSMUST00000001711 Krtap4-2B1AQ85 167 aa10.09□□□□□ -0.79
Hoxc6-201ENSMUST00000001711 Pcp4P63054 62 aa10.07□□□□□ -0.8
Hoxc6-201ENSMUST00000001711 Hmcn2A2AJ76 5100 aa10.07□□□□□ -0.8
Hoxc6-201ENSMUST00000001711 Gm10267M0QWD8 85 aa10.06□□□□□ -0.8
Hoxc6-201ENSMUST00000001711 Prr15lQ8JZM2 100 aa10.06□□□□□ -0.8
Hoxc6-201ENSMUST00000001711 Scgb1b2O35176 93 aa10.05□□□□□ -0.8
Hoxc6-201ENSMUST00000001711 Rpl37Q9D823 97 aa10.04□□□□□ -0.8
Hoxc6-201ENSMUST00000001711 Hist1h4aP62806 103 aaKnown RBP10□□□□□ -0.81
Hoxc6-201ENSMUST00000001711 Sec61bQ9CQS8 96 aaKnown RBP10□□□□□ -0.81
Hoxc6-201ENSMUST00000001711 A0A286YE49 62 aa9.95□□□□□ -0.82
Hoxc6-201ENSMUST00000001711 Ubr4A2AN08 5180 aa9.94□□□□□ -0.82
Hoxc6-201ENSMUST00000001711 2310057N15RikQ9D6T8 200 aa9.94□□□□□ -0.82
Hoxc6-201ENSMUST00000001711 Samd13D3YUG0 102 aa9.93□□□□□ -0.82
Hoxc6-201ENSMUST00000001711 Prr13Q9CQJ5 137 aa9.92□□□□□ -0.82
Hoxc6-201ENSMUST00000001711 4932415D10RikA0A1W2P6U8 4986 aa9.91□□□□□ -0.82
Hoxc6-201ENSMUST00000001711 7530416G11RikJ3QJX6 159 aa9.88□□□□□ -0.83
Hoxc6-201ENSMUST00000001711 Spink8Q09TK9 105 aa9.87□□□□□ -0.83
Hoxc6-201ENSMUST00000001711 2310034C09RikQ9D746 214 aa9.85□□□□□ -0.83
Hoxc6-201ENSMUST00000001711 Naa38Q9D2U5 125 aa9.84□□□□□ -0.83
Hoxc6-201ENSMUST00000001711 Gm28539A0A087WSL9 92 aa9.83□□□□□ -0.84
Hoxc6-201ENSMUST00000001711 Rnase13Q5GAM7 153 aa9.82□□□□□ -0.84
Hoxc6-201ENSMUST00000001711 Apoc4Q61268 124 aa9.82□□□□□ -0.84
Hoxc6-201ENSMUST00000001711 Fam229bQ8CF36 80 aa9.79□□□□□ -0.84
Hoxc6-201ENSMUST00000001711 Krtap1-3A2A588 173 aa9.74□□□□□ -0.85
Hoxc6-201ENSMUST00000001711 Ndufc1Q9CQY9 76 aa9.74□□□□□ -0.85
Hoxc6-201ENSMUST00000001711 1700074P13RikQ9D9G7 251 aa9.74□□□□□ -0.85
Hoxc6-201ENSMUST00000001711 Serp2Q6TAW2 65 aa9.71□□□□□ -0.86
Hoxc6-201ENSMUST00000001711 Gm4491E0CX42 125 aa9.7□□□□□ -0.86
Hoxc6-201ENSMUST00000001711 Crct1Q6PAI5 102 aa9.68□□□□□ -0.86
Hoxc6-201ENSMUST00000001711 SmcpP15265 143 aa9.67□□□□□ -0.86
Hoxc6-201ENSMUST00000001711 4930518I15RikQ3V2W7 57 aa9.63□□□□□ -0.87
Hoxc6-201ENSMUST00000001711 Smim20D3Z7Q2 69 aa9.62□□□□□ -0.87
Hoxc6-201ENSMUST00000001711 Gm17416Q30KP4 66 aa9.58□□□□□ -0.88
Hoxc6-201ENSMUST00000001711 ZanO88799 5376 aa9.57□□□□□ -0.88
Hoxc6-201ENSMUST00000001711 Krtap16-3Q8C1I6 86 aa9.55□□□□□ -0.88
Hoxc6-201ENSMUST00000001711 Q8BGJ3 129 aa9.54□□□□□ -0.88
Hoxc6-201ENSMUST00000001711 Gm10999F6Q4M4 69 aa9.53□□□□□ -0.88
Hoxc6-201ENSMUST00000001711 Tmem258P61166 79 aa9.52□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 Krtap19-1Q925H2 87 aa9.51□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 A0A1Y7VJH8 109 aa9.5□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 Krtap19-3Q925H6 87 aa9.5□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 Gm19935A0A1B0GSF9 52 aa9.5□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 Fam229aB2KGE5 128 aa9.5□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 9230102O04RikA2ASX7 82 aa9.47□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 LorP18165 486 aa9.47□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 Rps28P62858 69 aaKnown RBP9.47□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 Defb38Q7TNV7 63 aa9.46□□□□□ -0.89
Hoxc6-201ENSMUST00000001711 B230307C23RikQ8BLB2 64 aa9.46□□□□□ -0.9
Hoxc6-201ENSMUST00000001711 Atox1O08997 68 aaKnown RBP9.44□□□□□ -0.9
Hoxc6-201ENSMUST00000001711 Fat4Q2PZL6 4981 aa9.43□□□□□ -0.9
Hoxc6-201ENSMUST00000001711 SvipQ3UZP4 77 aa9.43□□□□□ -0.9
Hoxc6-201ENSMUST00000001711 Gm10318A0A1W2P728 225 aa9.4□□□□□ -0.9
Hoxc6-201ENSMUST00000001711 Chtf8P0CG14 533 aa9.39□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 Smlr1J3QMJ4 66 aa9.38□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 1700042G07RikB1AUF7 90 aa9.37□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 4930507D05RikQ8C9C9 103 aa9.37□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 Rnf213E9Q555 5152 aaKnown RBP9.36□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 Gm21798J3QNU5 87 aa9.34□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 Coa6Q8BGD8 79 aa9.34□□□□□ -0.91
Hoxc6-201ENSMUST00000001711 Gm19402J3QJV4 266 aa9.33□□□□□ -0.92
Hoxc6-201ENSMUST00000001711 Spint4Q9D263 159 aa9.33□□□□□ -0.92
Hoxc6-201ENSMUST00000001711 Gm10160F6Y577 67 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms