RNA–Protein interactions for RNA: ENSMUST00000001711.5

Hoxc6-201, Transcript of Homeobox protein Hox-C6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc6, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6-201ENSMUST00000001711 Gm35339A0A140LHH9 1649 aa41.18■■■■■ 4.18
Hoxc6-201ENSMUST00000001711 NischQ80TM9 1593 aa40.85■■■■■ 4.13
Hoxc6-201ENSMUST00000001711 Abcc9P70170 1546 aa39.57■■■■□ 3.93
Hoxc6-201ENSMUST00000001711 Abcc8B2RUS7 1588 aa39.33■■■■□ 3.89
Hoxc6-201ENSMUST00000001711 ScribQ80U72 1612 aa37.63■■■■□ 3.61
Hoxc6-201ENSMUST00000001711 NacadQ5SWP3 1504 aa36.53■■■■□ 3.44
Hoxc6-201ENSMUST00000001711 Kdm5dQ62240 1548 aa36.51■■■■□ 3.44
Hoxc6-201ENSMUST00000001711 Dcaf1Q80TR8 1506 aa36.38■■■■□ 3.41
Hoxc6-201ENSMUST00000001711 Sycp2Q9CUU3 1500 aa35.78■■■■□ 3.32
Hoxc6-201ENSMUST00000001711 Rhox8Q6VSS7 320 aa35.77■■■■□ 3.32
Hoxc6-201ENSMUST00000001711 Rb1cc1Q9ESK9 1588 aa35.64■■■■□ 3.3
Hoxc6-201ENSMUST00000001711 Ccdc180J3QNE4 1664 aa35.27■■■■□ 3.24
Hoxc6-201ENSMUST00000001711 BicraF8VPZ9 1578 aa35.2■■■■□ 3.23
Hoxc6-201ENSMUST00000001711 Baz1aO88379 1555 aa35.18■■■■□ 3.22
Hoxc6-201ENSMUST00000001711 Crybg2B7ZCC2 1516 aa34.99■■■■□ 3.19
Hoxc6-201ENSMUST00000001711 Zcchc6Q5BLK4 1491 aaKnown RBP34.57■■■■□ 3.12
Hoxc6-201ENSMUST00000001711 Smarca2Q6DIC0 1577 aa34.2■■■■□ 3.06
Hoxc6-201ENSMUST00000001711 Pds5bQ4VA53 1446 aaKnown RBP34.14■■■■□ 3.06
Hoxc6-201ENSMUST00000001711 Rtl1Q7M732 1744 aa34.13■■■■□ 3.05
Hoxc6-201ENSMUST00000001711 Atad2bE9Q166 1460 aaKnown RBP33.91■■■■□ 3.02
Hoxc6-201ENSMUST00000001711 Cecr2E9Q2Z1 1453 aa33.86■■■■□ 3.01
Hoxc6-201ENSMUST00000001711 Smarca4Q3TKT4 1613 aaKnown RBP33.83■■■■□ 3.01
Hoxc6-201ENSMUST00000001711 Thoc2B1AZI6 1594 aaKnown RBP33.65■■■□□ 2.98
Hoxc6-201ENSMUST00000001711 Iqgap2Q3UQ44 1575 aa33.57■■■□□ 2.96
Hoxc6-201ENSMUST00000001711 Dnajc5bQ9CQ94 199 aa33.45■■■□□ 2.95
Hoxc6-201ENSMUST00000001711 Ercc6F8VPZ5 1481 aa33.44■■■□□ 2.94
Hoxc6-201ENSMUST00000001711 Ccdc136Q3TVA9 1136 aa33.38■■■□□ 2.93
Hoxc6-201ENSMUST00000001711 Brd4Q9ESU6 1400 aaKnown RBP33.28■■■□□ 2.92
Hoxc6-201ENSMUST00000001711 Wdr62Q3U3T8 1523 aa33.21■■■□□ 2.91
Hoxc6-201ENSMUST00000001711 CftrP26361 1476 aa33.2■■■□□ 2.91
Hoxc6-201ENSMUST00000001711 Cttnbp2B9EJA2 1648 aa33.18■■■□□ 2.9
Hoxc6-201ENSMUST00000001711 Synj1Q8CHC4 1574 aa33.18■■■□□ 2.9
Hoxc6-201ENSMUST00000001711 Frmpd1A2AKB4 1549 aa33.16■■■□□ 2.9
Hoxc6-201ENSMUST00000001711 Cc2d2aQ8CFW7 1633 aa33.14■■■□□ 2.9
Hoxc6-201ENSMUST00000001711 Fam135aQ6NS59 1506 aa32.99■■■□□ 2.87
Hoxc6-201ENSMUST00000001711 Trim41Q5NCC3 630 aa32.95■■■□□ 2.86
Hoxc6-201ENSMUST00000001711 Phldb1Q6PDH0 1371 aaKnown RBP32.87■■■□□ 2.85
Hoxc6-201ENSMUST00000001711 Unc13aQ4KUS2 1712 aa32.74■■■□□ 2.83
Hoxc6-201ENSMUST00000001711 Esf1Q3V1V3 845 aaKnown RBP32.67■■■□□ 2.82
Hoxc6-201ENSMUST00000001711 Baz1bQ9Z277 1479 aa32.66■■■□□ 2.82
Hoxc6-201ENSMUST00000001711 Ubl4bQ9CQ84 188 aa32.54■■■□□ 2.8
Hoxc6-201ENSMUST00000001711 Golga3P55937 1487 aa32.27■■■□□ 2.76
Hoxc6-201ENSMUST00000001711 Rsf1E9PWW9 1441 aaKnown RBP32.25■■■□□ 2.75
Hoxc6-201ENSMUST00000001711 Mrc2Q64449 1479 aa32.24■■■□□ 2.75
Hoxc6-201ENSMUST00000001711 Top2bQ64511 1612 aa32.18■■■□□ 2.74
Hoxc6-201ENSMUST00000001711 Lamc3Q9R0B6 1581 aa32.14■■■□□ 2.74
Hoxc6-201ENSMUST00000001711 Kif15Q6P9L6 1387 aa32.14■■■□□ 2.73
Hoxc6-201ENSMUST00000001711 Cngb1E1AZ71 1325 aa32.13■■■□□ 2.73
Hoxc6-201ENSMUST00000001711 Cux2P70298 1426 aa32.01■■■□□ 2.71
Hoxc6-201ENSMUST00000001711 TnnQ80Z71 1560 aa31.92■■■□□ 2.7
Hoxc6-201ENSMUST00000001711 Fmn1Q05860 1466 aa31.83■■■□□ 2.69
Hoxc6-201ENSMUST00000001711 Npm1Q61937 292 aaKnown RBP31.73■■■□□ 2.67
Hoxc6-201ENSMUST00000001711 Ccdc18Q640L5 1455 aa31.67■■■□□ 2.66
Hoxc6-201ENSMUST00000001711 Kif21aQ9QXL2 1672 aa31.66■■■□□ 2.66
Hoxc6-201ENSMUST00000001711 Cep164Q5DU05 1446 aa31.66■■■□□ 2.66
Hoxc6-201ENSMUST00000001711 Camsap1A2AHC3 1581 aa31.61■■■□□ 2.65
Hoxc6-201ENSMUST00000001711 Il27Q8K3I6 234 aa31.55■■■□□ 2.64
Hoxc6-201ENSMUST00000001711 Ccdc88bQ4QRL3 1481 aa31.51■■■□□ 2.63
Hoxc6-201ENSMUST00000001711 Lrriq1Q0P5X1 1673 aa31.49■■■□□ 2.63
Hoxc6-201ENSMUST00000001711 LrpprcQ6PB66 1392 aaKnown RBP31.41■■■□□ 2.62
Hoxc6-201ENSMUST00000001711 Dhx29Q6PGC1 1365 aaKnown RBP31.37■■■□□ 2.61
Hoxc6-201ENSMUST00000001711 Chic1Q8CBW7 227 aa31.34■■■□□ 2.61
Hoxc6-201ENSMUST00000001711 Top2aQ01320 1528 aaKnown RBP31.31■■■□□ 2.6
Hoxc6-201ENSMUST00000001711 PogzQ8BZH4 1409 aaKnown RBP31.27■■■□□ 2.6
Hoxc6-201ENSMUST00000001711 HrcG5E8J6 738 aa31.26■■■□□ 2.6
Hoxc6-201ENSMUST00000001711 Crocc2F6XLV1 1638 aa31.25■■■□□ 2.59
Hoxc6-201ENSMUST00000001711 Grin2bQ01097 1482 aa31.23■■■□□ 2.59
Hoxc6-201ENSMUST00000001711 Urb2E9Q7L1 1524 aaKnown RBP31.18■■■□□ 2.58
Hoxc6-201ENSMUST00000001711 Plb1Q3TTY0 1478 aa31.16■■■□□ 2.58
Hoxc6-201ENSMUST00000001711 Duox2A2AQ99 1517 aa31.13■■■□□ 2.57
Hoxc6-201ENSMUST00000001711 Eif4g3Q80XI3 1579 aaKnown RBP31.06■■■□□ 2.56
Hoxc6-201ENSMUST00000001711 NrkQ9R0G8 1455 aa31.02■■■□□ 2.56
Hoxc6-201ENSMUST00000001711 Efcab5A0JP43 1406 aa31.02■■■□□ 2.56
Hoxc6-201ENSMUST00000001711 Ift140E9PY46 1464 aa30.95■■■□□ 2.55
Hoxc6-201ENSMUST00000001711 Shroom4Q1W617 1475 aa30.89■■■□□ 2.54
Hoxc6-201ENSMUST00000001711 Samd9lQ69Z37 1561 aa30.89■■■□□ 2.53
Hoxc6-201ENSMUST00000001711 PtprkP35822 1457 aa30.84■■■□□ 2.53
Hoxc6-201ENSMUST00000001711 Disp1Q3TDN0 1521 aa30.78■■■□□ 2.52
Hoxc6-201ENSMUST00000001711 Pbrm1Q8BSQ9 1634 aaKnown RBP30.72■■■□□ 2.51
Hoxc6-201ENSMUST00000001711 Rusc2Q80U22 1514 aa30.71■■■□□ 2.51
Hoxc6-201ENSMUST00000001711 Rad54l2Q99NG0 1466 aa30.66■■■□□ 2.5
Hoxc6-201ENSMUST00000001711 Gab3Q8BSM5 595 aa30.66■■■□□ 2.5
Hoxc6-201ENSMUST00000001711 Npm2Q80W85 207 aa30.64■■■□□ 2.5
Hoxc6-201ENSMUST00000001711 Nup160Q9Z0W3 1402 aaKnown RBP30.64■■■□□ 2.5
Hoxc6-201ENSMUST00000001711 Setd1bQ8CFT2 1985 aa30.61■■■□□ 2.49
Hoxc6-201ENSMUST00000001711 SynmQ70IV5 1561 aa30.59■■■□□ 2.49
Hoxc6-201ENSMUST00000001711 Cc2d2bA0A286YDU8 1405 aa30.58■■■□□ 2.49
Hoxc6-201ENSMUST00000001711 Magi3Q9EQJ9 1476 aa30.58■■■□□ 2.49
Hoxc6-201ENSMUST00000001711 Grin2aP35436 1464 aa30.57■■■□□ 2.48
Hoxc6-201ENSMUST00000001711 Zeb1Q64318 1117 aa30.55■■■□□ 2.48
Hoxc6-201ENSMUST00000001711 Rapgef2Q8CHG7 1496 aa30.55■■■□□ 2.48
Hoxc6-201ENSMUST00000001711 Mroh2bQ7M6Y6 1581 aa30.51■■■□□ 2.47
Hoxc6-201ENSMUST00000001711 Pla2r1Q62028 1487 aa30.45■■■□□ 2.47
Hoxc6-201ENSMUST00000001711 Gpatch8A2A6A1 1505 aa30.43■■■□□ 2.46
Hoxc6-201ENSMUST00000001711 AqrQ8CFQ3 1481 aaKnown RBP30.4■■■□□ 2.46
Hoxc6-201ENSMUST00000001711 Arhgap35Q91YM2 1499 aa30.38■■■□□ 2.45
Hoxc6-201ENSMUST00000001711 Shroom2A2ALU4 1481 aa30.37■■■□□ 2.45
Hoxc6-201ENSMUST00000001711 Map3k1P53349 1493 aa30.36■■■□□ 2.45
Hoxc6-201ENSMUST00000001711 Cep162Q6ZQ06 1403 aa30.35■■■□□ 2.45
Hoxc6-201ENSMUST00000001711 Eif4g1Q6NZJ6 1600 aaKnown RBP30.34■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms