RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Hist1h2bbQ64475 126 aa9.87□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Hist1h2bkQ8CGP1 126 aaKnown RBP9.87□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Hist1h2bpQ8CGP2 126 aaKnown RBP9.87□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Dph3Q8K0W9 82 aa9.87□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 MalO09198 153 aa9.86□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Cops9Q3U898 57 aa9.85□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Hist2h2beQ64524 126 aa9.85□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Gm10295Q8CCF3 114 aa9.85□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Gm9821Q8K076 103 aa9.85□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Lage3Q9CR70 148 aa9.85□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Dpm2Q9Z324 84 aa9.85□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Trav4d-3A0A075B625 110 aa9.84□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Igkv4-58A0A0G2JGI6 119 aa9.84□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 SnrpeP62305 92 aaKnown RBP9.84□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Krtap19-3Q925H6 87 aa9.84□□□□□ -0.83
Sqstm1-205ENSMUST00000143379 Muc5bE9Q5I3 4800 aa9.82□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Trav13n-2A0A0G2JF93 110 aa9.82□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Defb37Q7TMD2 62 aa9.82□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Plscr4P58196 326 aa9.81□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Ndufv3Q8BK30 104 aaKnown RBP9.8□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 5930422O12RikQ8C4Y4 123 aa9.8□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Sec61bQ9CQS8 96 aaKnown RBP9.8□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Gnb1lQ9EQ15 326 aa9.8□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Scgb1b10A0A087WPW0 93 aa9.79□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Hbb-bsA8DUK4 147 aa9.79□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Tmem243B2RVB9 118 aa9.79□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Hbb-b1P02088 147 aa9.79□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Vpreb3D3Z6J4 130 aa9.78□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Hint1P70349 126 aaKnown RBP9.78□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Defb29Q8BGW9 78 aa9.78□□□□□ -0.84
Sqstm1-205ENSMUST00000143379 Gm2310J3QNJ2 377 aa9.77□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Lamtor3O88653 124 aa9.77□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Krtap16-3Q8C1I6 86 aa9.77□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Gm5142Q8C5X9 133 aa9.77□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Krtap19-1Q925H2 87 aa9.77□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 A0A286YE02 88 aa9.76□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Xlr5cQ9JJR2 179 aa9.76□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Cend1Q9JKC6 149 aa9.75□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Trappc1Q5NCF2 145 aa9.74□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 1700042G07RikB1AUF7 90 aa9.73□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Smim1P0C8K7 78 aa9.73□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Eif4ebp3Q80VV3 101 aa9.73□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 Defb45Q3V490 66 aa9.72□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 A830005F24RikQ8BRT5 167 aa9.72□□□□□ -0.85
Sqstm1-205ENSMUST00000143379 BC107364E9Q5A2 140 aa9.71□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 SelenowP63300 88 aa9.71□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Krtap4-6Q3V4B7 195 aa9.71□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Gm5868Q8BJG1 145 aa9.71□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Krtap1-4Q3V2D6 188 aa9.7□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Krtap15-1Q9QZU5 150 aa9.7□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Gm21886J3QJU9 214 aa9.68□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Dnal4Q9DCM4 105 aa9.68□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Ighv10-1A0A0B4J1J6 119 aa9.66□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 P0C913 63 aa9.66□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Tma7Q8K003 64 aaKnown RBP9.66□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 2310034C09RikQ9D746 214 aa9.66□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Igkv3-4A0A140T8Q4 119 aa9.65□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 Vmn1r197Q8R265 298 aa9.65□□□□□ -0.86
Sqstm1-205ENSMUST00000143379 H2al1nQ497L1 109 aa9.63□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 Gm11939A2A592 99 aa9.62□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 Smim26Q3V460 107 aa9.61□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 Q8BT88 171 aa9.61□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 A730071L15RikQ8C4X0 137 aa9.6□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 Gm10401E9Q3K6 71 aa9.59□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 IqcjQ8BPW0 110 aa9.59□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 4930535I16RikQ9CUI2 172 aa9.59□□□□□ -0.87
Sqstm1-205ENSMUST00000143379 Gm16253D3Z167 63 aa9.58□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Vamp8O70404 101 aa9.58□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Gm37389A0A0A6YW05 95 aa9.56□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Rpl39lQ9CQD0 51 aa9.56□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Pam16Q9CQV1 125 aa9.55□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Igkv8-21A0A140T8P7 120 aa9.53□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Krtap4-1Q3UUY3 169 aa9.53□□□□□ -0.88
Sqstm1-205ENSMUST00000143379 Uqcc3Q8K2T4 89 aa9.52□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Mdn1A2ANY6 5589 aaKnown RBP9.52□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 1700018G05RikA0A1B0GSI2 66 aa9.51□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Rab37Q9JKM7 223 aa9.51□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 P06320 134 aa9.49□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Cited4Q9WUL8 182 aa9.49□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Trav3-4A0A075B654 114 aa9.48□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Igkv1-35A0A0G2JDE5 120 aa9.48□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Gemin7Q9CWY4 129 aa9.48□□□□□ -0.89
Sqstm1-205ENSMUST00000143379 Tal2Q62282 108 aa9.46□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 Chchd10Q7TNL9 138 aa9.46□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 Igkv8-28A0A0G2JE47 121 aa9.45□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 CckP09240 115 aa9.44□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 Igkv2-109A0A075B5K6 120 aa9.43□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 Gm16381A0A1Y7VKT9 73 aa9.42□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 Sigmar1O55242 223 aa9.4□□□□□ -0.9
Sqstm1-205ENSMUST00000143379 Cox6a2P43023 97 aa9.37□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Rpl37Q9D823 97 aa9.37□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Gm11564A2A4L9 201 aa9.36□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Gm11563B1AQ90 168 aa9.36□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Gm11595B1AQA7 289 aa9.36□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Krtap4-8B1AQA8 209 aa9.36□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Grcc10O35127 126 aa9.36□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 G0s2Q61585 103 aa9.36□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 9530003J23RikQ8BM26 151 aa9.35□□□□□ -0.91
Sqstm1-205ENSMUST00000143379 Ifitm6A0A1B0GS75 124 aa9.33□□□□□ -0.92
Sqstm1-205ENSMUST00000143379 Ctxnd2A0A1B0GQX3 59 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 145 ms