RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Gm35339A0A140LHH9 1649 aa42.99■■■■■ 4.47
Sqstm1-205ENSMUST00000143379 NischQ80TM9 1593 aa41.93■■■■■ 4.3
Sqstm1-205ENSMUST00000143379 Abcc9P70170 1546 aa41.34■■■■■ 4.21
Sqstm1-205ENSMUST00000143379 Abcc8B2RUS7 1588 aa40.92■■■■■ 4.14
Sqstm1-205ENSMUST00000143379 ScribQ80U72 1612 aa40.25■■■■■ 4.03
Sqstm1-205ENSMUST00000143379 NacadQ5SWP3 1504 aa38.61■■■■□ 3.77
Sqstm1-205ENSMUST00000143379 Kdm5dQ62240 1548 aa38.58■■■■□ 3.77
Sqstm1-205ENSMUST00000143379 Dnajc5bQ9CQ94 199 aa38.54■■■■□ 3.76
Sqstm1-205ENSMUST00000143379 Sycp2Q9CUU3 1500 aa37.97■■■■□ 3.67
Sqstm1-205ENSMUST00000143379 BicraF8VPZ9 1578 aa37.76■■■■□ 3.64
Sqstm1-205ENSMUST00000143379 Dcaf1Q80TR8 1506 aa37.36■■■■□ 3.57
Sqstm1-205ENSMUST00000143379 Thoc2B1AZI6 1594 aaKnown RBP36.99■■■■□ 3.51
Sqstm1-205ENSMUST00000143379 Pds5bQ4VA53 1446 aaKnown RBP36.69■■■■□ 3.46
Sqstm1-205ENSMUST00000143379 Rb1cc1Q9ESK9 1588 aa36.48■■■■□ 3.43
Sqstm1-205ENSMUST00000143379 Cc2d2aQ8CFW7 1633 aa36.34■■■■□ 3.41
Sqstm1-205ENSMUST00000143379 Atad2bE9Q166 1460 aaKnown RBP36.17■■■■□ 3.38
Sqstm1-205ENSMUST00000143379 Ercc6F8VPZ5 1481 aa35.9■■■■□ 3.34
Sqstm1-205ENSMUST00000143379 Fam135aQ6NS59 1506 aa35.86■■■■□ 3.33
Sqstm1-205ENSMUST00000143379 Baz1aO88379 1555 aa35.82■■■■□ 3.32
Sqstm1-205ENSMUST00000143379 Dnajc5P60904 198 aa35.75■■■■□ 3.31
Sqstm1-205ENSMUST00000143379 Crybg2B7ZCC2 1516 aa35.72■■■■□ 3.31
Sqstm1-205ENSMUST00000143379 Smarca2Q6DIC0 1577 aa35.68■■■■□ 3.3
Sqstm1-205ENSMUST00000143379 Zcchc6Q5BLK4 1491 aaKnown RBP35.55■■■■□ 3.28
Sqstm1-205ENSMUST00000143379 Ccdc180J3QNE4 1664 aa35.49■■■■□ 3.27
Sqstm1-205ENSMUST00000143379 Iqgap2Q3UQ44 1575 aa35.48■■■■□ 3.27
Sqstm1-205ENSMUST00000143379 Smarca4Q3TKT4 1613 aaKnown RBP35.46■■■■□ 3.27
Sqstm1-205ENSMUST00000143379 Wdr62Q3U3T8 1523 aa35.36■■■■□ 3.25
Sqstm1-205ENSMUST00000143379 Frmpd1A2AKB4 1549 aa35.35■■■■□ 3.25
Sqstm1-205ENSMUST00000143379 Phldb1Q6PDH0 1371 aaKnown RBP35.27■■■■□ 3.24
Sqstm1-205ENSMUST00000143379 Trim41Q5NCC3 630 aa35.23■■■■□ 3.23
Sqstm1-205ENSMUST00000143379 Cecr2E9Q2Z1 1453 aa35.21■■■■□ 3.23
Sqstm1-205ENSMUST00000143379 Baz1bQ9Z277 1479 aa35.11■■■■□ 3.21
Sqstm1-205ENSMUST00000143379 Rhox8Q6VSS7 320 aa35.07■■■■□ 3.2
Sqstm1-205ENSMUST00000143379 Ubl4bQ9CQ84 188 aa35.03■■■■□ 3.2
Sqstm1-205ENSMUST00000143379 Mrc2Q64449 1479 aa34.98■■■■□ 3.19
Sqstm1-205ENSMUST00000143379 Unc13aQ4KUS2 1712 aa34.88■■■■□ 3.17
Sqstm1-205ENSMUST00000143379 Lrriq1Q0P5X1 1673 aa34.4■■■■□ 3.1
Sqstm1-205ENSMUST00000143379 Rsf1E9PWW9 1441 aaKnown RBP34.14■■■■□ 3.06
Sqstm1-205ENSMUST00000143379 CftrP26361 1476 aa34.07■■■■□ 3.04
Sqstm1-205ENSMUST00000143379 Shroom2A2ALU4 1481 aa34.03■■■■□ 3.04
Sqstm1-205ENSMUST00000143379 Cttnbp2B9EJA2 1648 aa34.01■■■■□ 3.03
Sqstm1-205ENSMUST00000143379 Kif21aQ9QXL2 1672 aa33.96■■■■□ 3.03
Sqstm1-205ENSMUST00000143379 Synj1Q8CHC4 1574 aa33.94■■■■□ 3.02
Sqstm1-205ENSMUST00000143379 Cux2P70298 1426 aa33.88■■■■□ 3.01
Sqstm1-205ENSMUST00000143379 Col17a1Q07563 1470 aa33.87■■■■□ 3.01
Sqstm1-205ENSMUST00000143379 Eif4g3Q80XI3 1579 aaKnown RBP33.83■■■■□ 3.01
Sqstm1-205ENSMUST00000143379 Kif15Q6P9L6 1387 aa33.64■■■□□ 2.98
Sqstm1-205ENSMUST00000143379 Brd4Q9ESU6 1400 aaKnown RBP33.51■■■□□ 2.95
Sqstm1-205ENSMUST00000143379 Pabpn1Q8CCS6 302 aaKnown RBP33.42■■■□□ 2.94
Sqstm1-205ENSMUST00000143379 Top2bQ64511 1612 aa33.4■■■□□ 2.94
Sqstm1-205ENSMUST00000143379 Urb2E9Q7L1 1524 aaKnown RBP33.38■■■□□ 2.93
Sqstm1-205ENSMUST00000143379 Npm1Q61937 292 aaKnown RBP33.32■■■□□ 2.92
Sqstm1-205ENSMUST00000143379 Lamc3Q9R0B6 1581 aa33.3■■■□□ 2.92
Sqstm1-205ENSMUST00000143379 Esf1Q3V1V3 845 aaKnown RBP33.26■■■□□ 2.91
Sqstm1-205ENSMUST00000143379 Plb1Q3TTY0 1478 aa33.25■■■□□ 2.91
Sqstm1-205ENSMUST00000143379 Pelp1Q9DBD5 1123 aaKnown RBP33.16■■■□□ 2.9
Sqstm1-205ENSMUST00000143379 Cep164Q5DU05 1446 aa33.14■■■□□ 2.9
Sqstm1-205ENSMUST00000143379 Ccdc136Q3TVA9 1136 aa33.13■■■□□ 2.89
Sqstm1-205ENSMUST00000143379 Pcdh10E9PXQ7 1057 aa33.11■■■□□ 2.89
Sqstm1-205ENSMUST00000143379 Dhx29Q6PGC1 1365 aaKnown RBP33.09■■■□□ 2.89
Sqstm1-205ENSMUST00000143379 Zcchc11B2RX14 1644 aaKnown RBP33.08■■■□□ 2.89
Sqstm1-205ENSMUST00000143379 Rtl1Q7M732 1744 aa33.02■■■□□ 2.88
Sqstm1-205ENSMUST00000143379 Rusc2Q80U22 1514 aa32.97■■■□□ 2.87
Sqstm1-205ENSMUST00000143379 Crocc2F6XLV1 1638 aa32.91■■■□□ 2.86
Sqstm1-205ENSMUST00000143379 Il27Q8K3I6 234 aa32.84■■■□□ 2.85
Sqstm1-205ENSMUST00000143379 LrpprcQ6PB66 1392 aaKnown RBP32.79■■■□□ 2.84
Sqstm1-205ENSMUST00000143379 Arhgef5E9Q7D5 1581 aa32.76■■■□□ 2.84
Sqstm1-205ENSMUST00000143379 Ift140E9PY46 1464 aa32.74■■■□□ 2.83
Sqstm1-205ENSMUST00000143379 Ccdc18Q640L5 1455 aa32.69■■■□□ 2.82
Sqstm1-205ENSMUST00000143379 Adgrl3Q80TS3 1537 aa32.64■■■□□ 2.82
Sqstm1-205ENSMUST00000143379 TnnQ80Z71 1560 aa32.62■■■□□ 2.81
Sqstm1-205ENSMUST00000143379 Camsap1A2AHC3 1581 aa32.61■■■□□ 2.81
Sqstm1-205ENSMUST00000143379 PogzQ8BZH4 1409 aaKnown RBP32.54■■■□□ 2.8
Sqstm1-205ENSMUST00000143379 Ttbk1Q6PCN3 1308 aa32.5■■■□□ 2.79
Sqstm1-205ENSMUST00000143379 Disp1Q3TDN0 1521 aa32.48■■■□□ 2.79
Sqstm1-205ENSMUST00000143379 Cep170Q6A065 1588 aa32.42■■■□□ 2.78
Sqstm1-205ENSMUST00000143379 PtprkP35822 1457 aa32.42■■■□□ 2.78
Sqstm1-205ENSMUST00000143379 PtprtQ99M80 1454 aa32.42■■■□□ 2.78
Sqstm1-205ENSMUST00000143379 Setd1bQ8CFT2 1985 aa32.38■■■□□ 2.77
Sqstm1-205ENSMUST00000143379 Gm156Q58A37 223 aa32.38■■■□□ 2.77
Sqstm1-205ENSMUST00000143379 Duox2A2AQ99 1517 aa32.37■■■□□ 2.77
Sqstm1-205ENSMUST00000143379 Nup160Q9Z0W3 1402 aaKnown RBP32.32■■■□□ 2.76
Sqstm1-205ENSMUST00000143379 Gapvd1Q6PAR5 1458 aa32.31■■■□□ 2.76
Sqstm1-205ENSMUST00000143379 Golga3P55937 1487 aa32.28■■■□□ 2.76
Sqstm1-205ENSMUST00000143379 Cc2d2bA0A286YDU8 1405 aa32.24■■■□□ 2.75
Sqstm1-205ENSMUST00000143379 Samd9lQ69Z37 1561 aa32.2■■■□□ 2.75
Sqstm1-205ENSMUST00000143379 Pprc1Q6NZN1 1644 aa32.18■■■□□ 2.74
Sqstm1-205ENSMUST00000143379 Pbrm1Q8BSQ9 1634 aaKnown RBP32.15■■■□□ 2.74
Sqstm1-205ENSMUST00000143379 Fgd6Q69ZL1 1399 aa32.1■■■□□ 2.73
Sqstm1-205ENSMUST00000143379 Grin2bQ01097 1482 aa32.04■■■□□ 2.72
Sqstm1-205ENSMUST00000143379 AqrQ8CFQ3 1481 aaKnown RBP32.02■■■□□ 2.72
Sqstm1-205ENSMUST00000143379 Rad54l2Q99NG0 1466 aa32.01■■■□□ 2.71
Sqstm1-205ENSMUST00000143379 Rapgef2Q8CHG7 1496 aa31.96■■■□□ 2.71
Sqstm1-205ENSMUST00000143379 Abcc1O35379 1528 aa31.95■■■□□ 2.71
Sqstm1-205ENSMUST00000143379 Ythdc2B2RR83 1445 aaKnown RBP31.93■■■□□ 2.7
Sqstm1-205ENSMUST00000143379 Grin2aP35436 1464 aa31.93■■■□□ 2.7
Sqstm1-205ENSMUST00000143379 Magi3Q9EQJ9 1476 aa31.93■■■□□ 2.7
Sqstm1-205ENSMUST00000143379 Cngb1E1AZ71 1325 aa31.92■■■□□ 2.7
Sqstm1-205ENSMUST00000143379 AknaQ80VW7 1404 aa31.92■■■□□ 2.7
Sqstm1-205ENSMUST00000143379 Fmn1Q05860 1466 aa31.84■■■□□ 2.69
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms