Protein–RNA interactions for Protein: Q8CCF3

Gm10295, Predicted gene 10295, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10295Q8CCF3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm10295Q8CCF3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm10295Q8CCF3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Gm10295Q8CCF3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm10295Q8CCF3 Psd-208ENSMUST00000224556 2034 ntBASIC22.84■■□□□ 1.25
Gm10295Q8CCF3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm10295Q8CCF3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm10295Q8CCF3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm10295Q8CCF3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm10295Q8CCF3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm10295Q8CCF3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm10295Q8CCF3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm10295Q8CCF3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm10295Q8CCF3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm10295Q8CCF3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Gm10295Q8CCF3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm10295Q8CCF3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm10295Q8CCF3 Gm25239-201ENSMUST00000174915 86 ntBASIC21.19■□□□□ 0.98
Gm10295Q8CCF3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm10295Q8CCF3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm10295Q8CCF3 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.86■□□□□ 0.93
Gm10295Q8CCF3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm10295Q8CCF3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm10295Q8CCF3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm10295Q8CCF3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm10295Q8CCF3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm10295Q8CCF3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.65■□□□□ 0.9
Gm10295Q8CCF3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm10295Q8CCF3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm10295Q8CCF3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm10295Q8CCF3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm10295Q8CCF3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm10295Q8CCF3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm10295Q8CCF3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gm10295Q8CCF3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10295Q8CCF3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm10295Q8CCF3 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.26■□□□□ 0.83
Gm10295Q8CCF3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm10295Q8CCF3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm10295Q8CCF3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm10295Q8CCF3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gm10295Q8CCF3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm10295Q8CCF3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm10295Q8CCF3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Gm10295Q8CCF3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20■□□□□ 0.79
Gm10295Q8CCF3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm10295Q8CCF3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.88■□□□□ 0.77
Gm10295Q8CCF3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm10295Q8CCF3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm10295Q8CCF3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm10295Q8CCF3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10295Q8CCF3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10295Q8CCF3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm10295Q8CCF3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gm10295Q8CCF3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm10295Q8CCF3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm10295Q8CCF3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm10295Q8CCF3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Gm10295Q8CCF3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm10295Q8CCF3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10295Q8CCF3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10295Q8CCF3 Gm15042-201ENSMUST00000120212 883 ntBASIC19.64■□□□□ 0.73
Gm10295Q8CCF3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm10295Q8CCF3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm10295Q8CCF3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10295Q8CCF3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm10295Q8CCF3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm10295Q8CCF3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm10295Q8CCF3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10295Q8CCF3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm10295Q8CCF3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm10295Q8CCF3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10295Q8CCF3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10295Q8CCF3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10295Q8CCF3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm10295Q8CCF3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm10295Q8CCF3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm10295Q8CCF3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm10295Q8CCF3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm10295Q8CCF3 Gm15045-201ENSMUST00000117359 883 ntBASIC19.38■□□□□ 0.69
Gm10295Q8CCF3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.37■□□□□ 0.69
Gm10295Q8CCF3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm10295Q8CCF3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10295Q8CCF3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm10295Q8CCF3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm10295Q8CCF3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm10295Q8CCF3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm10295Q8CCF3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm10295Q8CCF3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm10295Q8CCF3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm10295Q8CCF3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm10295Q8CCF3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm10295Q8CCF3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm10295Q8CCF3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Gm10295Q8CCF3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm10295Q8CCF3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.06■□□□□ 0.64
Gm10295Q8CCF3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm10295Q8CCF3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Gm10295Q8CCF3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm10295Q8CCF3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms