RNA–Protein interactions for RNA: ENSMUST00000113689.7

Tpm1-208, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 904 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-208ENSMUST00000113689 IqcjQ8BPW0 110 aa9.88□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Ighv1-62-2A0A0A6YXZ4 119 aa9.87□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Lst1O08843 95 aa9.87□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Rpl32-psP17932 135 aa9.87□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Pam16Q9CQV1 125 aa9.86□□□□□ -0.83
Tpm1-208ENSMUST00000113689 LorP18165 486 aa9.85□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Cops9Q3U898 57 aa9.85□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Defb45Q3V490 66 aa9.85□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Defb37Q7TMD2 62 aa9.85□□□□□ -0.83
Tpm1-208ENSMUST00000113689 MalO09198 153 aa9.84□□□□□ -0.83
Tpm1-208ENSMUST00000113689 Rps29P62274 56 aa9.83□□□□□ -0.84
Tpm1-208ENSMUST00000113689 A930002H24RikQ8C8Y3 163 aa9.83□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Igkv4-58A0A0G2JGI6 119 aa9.82□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Gm10320E9PW43 113 aa9.82□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Gm19402J3QJV4 266 aa9.82□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Lage3Q9CR70 148 aa9.82□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Trav13n-2A0A0G2JF93 110 aa9.81□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Ctxnd2A0A1B0GQX3 59 aa9.81□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Elof1P60003 83 aa9.81□□□□□ -0.84
Tpm1-208ENSMUST00000113689 5930422O12RikQ8C4Y4 123 aa9.79□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Gm9821Q8K076 103 aa9.79□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Defb29Q8BGW9 78 aa9.78□□□□□ -0.84
Tpm1-208ENSMUST00000113689 Gm11562A0PK51 136 aa9.77□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Tmem243B2RVB9 118 aa9.77□□□□□ -0.85
Tpm1-208ENSMUST00000113689 A0A286YE02 88 aa9.76□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Gm2310J3QNJ2 377 aa9.76□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Eif4ebp3Q80VV3 101 aa9.76□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Scgb1b10A0A087WPW0 93 aa9.75□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Vpreb3D3Z6J4 130 aa9.75□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Vamp8O70404 101 aa9.74□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Lamtor3O88653 124 aa9.74□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Grcc10O35127 126 aa9.73□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Hint1P70349 126 aaKnown RBP9.73□□□□□ -0.85
Tpm1-208ENSMUST00000113689 SelenowP63300 88 aa9.72□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Gm5142Q8C5X9 133 aa9.72□□□□□ -0.85
Tpm1-208ENSMUST00000113689 Gm5868Q8BJG1 145 aa9.71□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Krtap15-1Q9QZU5 150 aa9.7□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Rnf213E9Q555 5152 aaKnown RBP9.7□□□□□ -0.86
Tpm1-208ENSMUST00000113689 A830005F24RikQ8BRT5 167 aa9.69□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Uqcc3Q8K2T4 89 aa9.69□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Gm21886J3QJU9 214 aa9.68□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Xlr5cQ9JJR2 179 aa9.68□□□□□ -0.86
Tpm1-208ENSMUST00000113689 BC107364E9Q5A2 140 aa9.67□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Igkv3-4A0A140T8Q4 119 aa9.66□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Tal2Q62282 108 aa9.66□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Sec61bQ9CQS8 96 aaKnown RBP9.66□□□□□ -0.86
Tpm1-208ENSMUST00000113689 Gm11939A2A592 99 aa9.64□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Vmn1r197Q8R265 298 aa9.64□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Gemin7Q9CWY4 129 aa9.64□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Dnal4Q9DCM4 105 aa9.63□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Gm10061D3Z714 54 aa9.62□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Ighv10-1A0A0B4J1J6 119 aa9.6□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Smim26Q3V460 107 aa9.6□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Q8BT88 171 aa9.6□□□□□ -0.87
Tpm1-208ENSMUST00000113689 Rab37Q9JKM7 223 aa9.59□□□□□ -0.87
Tpm1-208ENSMUST00000113689 A730071L15RikQ8C4X0 137 aa9.58□□□□□ -0.88
Tpm1-208ENSMUST00000113689 CckP09240 115 aa9.57□□□□□ -0.88
Tpm1-208ENSMUST00000113689 Gm10401E9Q3K6 71 aa9.55□□□□□ -0.88
Tpm1-208ENSMUST00000113689 4930535I16RikQ9CUI2 172 aa9.55□□□□□ -0.88
Tpm1-208ENSMUST00000113689 2310034C09RikQ9D746 214 aa9.55□□□□□ -0.88
Tpm1-208ENSMUST00000113689 Igkv8-21A0A140T8P7 120 aa9.53□□□□□ -0.88
Tpm1-208ENSMUST00000113689 Gm10318A0A1W2P728 225 aa9.53□□□□□ -0.88
Tpm1-208ENSMUST00000113689 Gm16253D3Z167 63 aa9.53□□□□□ -0.88
Tpm1-208ENSMUST00000113689 Rpl39lQ9CQD0 51 aa9.53□□□□□ -0.88
Tpm1-208ENSMUST00000113689 Gm37389A0A0A6YW05 95 aa9.52□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Krtap4-2B1AQ85 167 aa9.52□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Gm11569B1AQB1 180 aa9.52□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Ccl17F6R5P4 103 aa9.52□□□□□ -0.89
Tpm1-208ENSMUST00000113689 1700018G05RikA0A1B0GSI2 66 aa9.51□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Trav3-4A0A075B654 114 aa9.49□□□□□ -0.89
Tpm1-208ENSMUST00000113689 P01843 105 aa9.49□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Igkv1-35A0A0G2JDE5 120 aa9.48□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Krtap19-3Q925H6 87 aa9.48□□□□□ -0.89
Tpm1-208ENSMUST00000113689 Igkv8-28A0A0G2JE47 121 aa9.46□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Gm16381A0A1Y7VKT9 73 aa9.46□□□□□ -0.9
Tpm1-208ENSMUST00000113689 P06320 134 aa9.46□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Krtap16-3Q8C1I6 86 aa9.46□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Krtap19-1Q925H2 87 aa9.45□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Tac4Q99N14 128 aa9.44□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Smim13E9Q942 88 aa9.43□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Defb47Q30KN1 79 aa9.43□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Igkv2-109A0A075B5K6 120 aa9.41□□□□□ -0.9
Tpm1-208ENSMUST00000113689 Sigmar1O55242 223 aa9.39□□□□□ -0.91
Tpm1-208ENSMUST00000113689 G0s2Q61585 103 aa9.38□□□□□ -0.91
Tpm1-208ENSMUST00000113689 Rpl37Q9D823 97 aa9.38□□□□□ -0.91
Tpm1-208ENSMUST00000113689 Gm29423A0A087WRM1 55 aa9.37□□□□□ -0.91
Tpm1-208ENSMUST00000113689 CenpwQ3URR0 86 aa9.37□□□□□ -0.91
Tpm1-208ENSMUST00000113689 Chchd10Q7TNL9 138 aa9.37□□□□□ -0.91
Tpm1-208ENSMUST00000113689 1700042G07RikB1AUF7 90 aa9.36□□□□□ -0.91
Tpm1-208ENSMUST00000113689 4930524J08RikQ9CUJ5 163 aa9.33□□□□□ -0.92
Tpm1-208ENSMUST00000113689 Cox6a2P43023 97 aa9.32□□□□□ -0.92
Tpm1-208ENSMUST00000113689 9530003J23RikQ8BM26 151 aa9.32□□□□□ -0.92
Tpm1-208ENSMUST00000113689 Gm26620Q9CY65 116 aa9.32□□□□□ -0.92
Tpm1-208ENSMUST00000113689 Lce1gQ9D195 139 aa9.32□□□□□ -0.92
Tpm1-208ENSMUST00000113689 1700020N15RikL7MTX3 112 aa9.31□□□□□ -0.92
Tpm1-208ENSMUST00000113689 Ifitm6A0A1B0GS75 124 aa9.29□□□□□ -0.92
Tpm1-208ENSMUST00000113689 Krtap1-4Q3V2D6 188 aa9.29□□□□□ -0.92
Tpm1-208ENSMUST00000113689 SspoQ8CG65 4998 aa9.29□□□□□ -0.92
Tpm1-208ENSMUST00000113689 Vps25Q9CQ80 176 aa9.26□□□□□ -0.93
Tpm1-208ENSMUST00000113689 Igkv8-30A0A140T8M3 121 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms