RNA–Protein interactions for RNA: ENSMUST00000113689.7

Tpm1-208, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 904 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-208ENSMUST00000113689 Gm35339A0A140LHH9 1649 aa41.05■■■■■ 4.16
Tpm1-208ENSMUST00000113689 NischQ80TM9 1593 aa40.43■■■■■ 4.06
Tpm1-208ENSMUST00000113689 Abcc8B2RUS7 1588 aa39.23■■■■□ 3.87
Tpm1-208ENSMUST00000113689 Abcc9P70170 1546 aa39.06■■■■□ 3.84
Tpm1-208ENSMUST00000113689 ScribQ80U72 1612 aa38.1■■■■□ 3.69
Tpm1-208ENSMUST00000113689 NacadQ5SWP3 1504 aa36.77■■■■□ 3.48
Tpm1-208ENSMUST00000113689 Kdm5dQ62240 1548 aa36.73■■■■□ 3.47
Tpm1-208ENSMUST00000113689 Sycp2Q9CUU3 1500 aa36.11■■■■□ 3.37
Tpm1-208ENSMUST00000113689 Dcaf1Q80TR8 1506 aa35.91■■■■□ 3.34
Tpm1-208ENSMUST00000113689 BicraF8VPZ9 1578 aa35.72■■■■□ 3.31
Tpm1-208ENSMUST00000113689 Dnajc5bQ9CQ94 199 aa35.54■■■■□ 3.28
Tpm1-208ENSMUST00000113689 Rb1cc1Q9ESK9 1588 aa35.2■■■■□ 3.23
Tpm1-208ENSMUST00000113689 Pds5bQ4VA53 1446 aaKnown RBP34.72■■■■□ 3.15
Tpm1-208ENSMUST00000113689 Baz1aO88379 1555 aa34.64■■■■□ 3.14
Tpm1-208ENSMUST00000113689 Rhox8Q6VSS7 320 aa34.63■■■■□ 3.13
Tpm1-208ENSMUST00000113689 Thoc2B1AZI6 1594 aaKnown RBP34.62■■■■□ 3.13
Tpm1-208ENSMUST00000113689 Crybg2B7ZCC2 1516 aa34.5■■■■□ 3.11
Tpm1-208ENSMUST00000113689 Ccdc180J3QNE4 1664 aa34.38■■■■□ 3.09
Tpm1-208ENSMUST00000113689 Atad2bE9Q166 1460 aaKnown RBP34.33■■■■□ 3.09
Tpm1-208ENSMUST00000113689 Zcchc6Q5BLK4 1491 aaKnown RBP34.3■■■■□ 3.08
Tpm1-208ENSMUST00000113689 Cc2d2aQ8CFW7 1633 aa34.08■■■■□ 3.05
Tpm1-208ENSMUST00000113689 Ercc6F8VPZ5 1481 aa33.98■■■■□ 3.03
Tpm1-208ENSMUST00000113689 Smarca2Q6DIC0 1577 aa33.91■■■■□ 3.02
Tpm1-208ENSMUST00000113689 Smarca4Q3TKT4 1613 aaKnown RBP33.88■■■■□ 3.01
Tpm1-208ENSMUST00000113689 Cecr2E9Q2Z1 1453 aa33.81■■■■□ 3
Tpm1-208ENSMUST00000113689 Iqgap2Q3UQ44 1575 aa33.77■■■■□ 3
Tpm1-208ENSMUST00000113689 Fam135aQ6NS59 1506 aa33.73■■■□□ 2.99
Tpm1-208ENSMUST00000113689 Frmpd1A2AKB4 1549 aa33.55■■■□□ 2.96
Tpm1-208ENSMUST00000113689 Wdr62Q3U3T8 1523 aa33.55■■■□□ 2.96
Tpm1-208ENSMUST00000113689 Phldb1Q6PDH0 1371 aaKnown RBP33.42■■■□□ 2.94
Tpm1-208ENSMUST00000113689 Ubl4bQ9CQ84 188 aa33.21■■■□□ 2.91
Tpm1-208ENSMUST00000113689 Baz1bQ9Z277 1479 aa33.14■■■□□ 2.9
Tpm1-208ENSMUST00000113689 Unc13aQ4KUS2 1712 aa33.02■■■□□ 2.88
Tpm1-208ENSMUST00000113689 Mrc2Q64449 1479 aa32.96■■■□□ 2.87
Tpm1-208ENSMUST00000113689 CftrP26361 1476 aa32.87■■■□□ 2.85
Tpm1-208ENSMUST00000113689 Synj1Q8CHC4 1574 aa32.78■■■□□ 2.84
Tpm1-208ENSMUST00000113689 Cttnbp2B9EJA2 1648 aa32.77■■■□□ 2.84
Tpm1-208ENSMUST00000113689 Brd4Q9ESU6 1400 aaKnown RBP32.6■■■□□ 2.81
Tpm1-208ENSMUST00000113689 Ccdc136Q3TVA9 1136 aa32.55■■■□□ 2.8
Tpm1-208ENSMUST00000113689 Rtl1Q7M732 1744 aa32.54■■■□□ 2.8
Tpm1-208ENSMUST00000113689 Trim41Q5NCC3 630 aa32.49■■■□□ 2.79
Tpm1-208ENSMUST00000113689 Dnajc5P60904 198 aa32.41■■■□□ 2.78
Tpm1-208ENSMUST00000113689 Cux2P70298 1426 aa32.3■■■□□ 2.76
Tpm1-208ENSMUST00000113689 Esf1Q3V1V3 845 aaKnown RBP32.3■■■□□ 2.76
Tpm1-208ENSMUST00000113689 Lrriq1Q0P5X1 1673 aa32.28■■■□□ 2.76
Tpm1-208ENSMUST00000113689 Kif15Q6P9L6 1387 aa32.23■■■□□ 2.75
Tpm1-208ENSMUST00000113689 Rsf1E9PWW9 1441 aaKnown RBP32.19■■■□□ 2.74
Tpm1-208ENSMUST00000113689 Kif21aQ9QXL2 1672 aa32.11■■■□□ 2.73
Tpm1-208ENSMUST00000113689 Lamc3Q9R0B6 1581 aa31.96■■■□□ 2.71
Tpm1-208ENSMUST00000113689 Npm1Q61937 292 aaKnown RBP31.91■■■□□ 2.7
Tpm1-208ENSMUST00000113689 Eif4g3Q80XI3 1579 aaKnown RBP31.77■■■□□ 2.68
Tpm1-208ENSMUST00000113689 Cep164Q5DU05 1446 aa31.73■■■□□ 2.67
Tpm1-208ENSMUST00000113689 Urb2E9Q7L1 1524 aaKnown RBP31.64■■■□□ 2.66
Tpm1-208ENSMUST00000113689 Shroom2A2ALU4 1481 aa31.63■■■□□ 2.65
Tpm1-208ENSMUST00000113689 Il27Q8K3I6 234 aa31.61■■■□□ 2.65
Tpm1-208ENSMUST00000113689 Dhx29Q6PGC1 1365 aaKnown RBP31.59■■■□□ 2.65
Tpm1-208ENSMUST00000113689 Plb1Q3TTY0 1478 aa31.59■■■□□ 2.65
Tpm1-208ENSMUST00000113689 TnnQ80Z71 1560 aa31.47■■■□□ 2.63
Tpm1-208ENSMUST00000113689 Ccdc18Q640L5 1455 aa31.46■■■□□ 2.63
Tpm1-208ENSMUST00000113689 LrpprcQ6PB66 1392 aaKnown RBP31.44■■■□□ 2.62
Tpm1-208ENSMUST00000113689 Camsap1A2AHC3 1581 aa31.37■■■□□ 2.61
Tpm1-208ENSMUST00000113689 Crocc2F6XLV1 1638 aa31.36■■■□□ 2.61
Tpm1-208ENSMUST00000113689 Golga3P55937 1487 aa31.36■■■□□ 2.61
Tpm1-208ENSMUST00000113689 Top2bQ64511 1612 aa31.35■■■□□ 2.61
Tpm1-208ENSMUST00000113689 Col17a1Q07563 1470 aa31.33■■■□□ 2.61
Tpm1-208ENSMUST00000113689 Cngb1E1AZ71 1325 aa31.33■■■□□ 2.61
Tpm1-208ENSMUST00000113689 Pabpn1Q8CCS6 302 aaKnown RBP31.3■■■□□ 2.6
Tpm1-208ENSMUST00000113689 PogzQ8BZH4 1409 aaKnown RBP31.22■■■□□ 2.59
Tpm1-208ENSMUST00000113689 Ift140E9PY46 1464 aa31.19■■■□□ 2.58
Tpm1-208ENSMUST00000113689 Rusc2Q80U22 1514 aa31.18■■■□□ 2.58
Tpm1-208ENSMUST00000113689 Pelp1Q9DBD5 1123 aaKnown RBP31.13■■■□□ 2.57
Tpm1-208ENSMUST00000113689 Duox2A2AQ99 1517 aa31.07■■■□□ 2.56
Tpm1-208ENSMUST00000113689 Fmn1Q05860 1466 aa31.06■■■□□ 2.56
Tpm1-208ENSMUST00000113689 Disp1Q3TDN0 1521 aa30.98■■■□□ 2.55
Tpm1-208ENSMUST00000113689 Grin2bQ01097 1482 aa30.92■■■□□ 2.54
Tpm1-208ENSMUST00000113689 Samd9lQ69Z37 1561 aa30.83■■■□□ 2.53
Tpm1-208ENSMUST00000113689 Nup160Q9Z0W3 1402 aaKnown RBP30.81■■■□□ 2.52
Tpm1-208ENSMUST00000113689 Zcchc11B2RX14 1644 aaKnown RBP30.8■■■□□ 2.52
Tpm1-208ENSMUST00000113689 Cc2d2bA0A286YDU8 1405 aa30.76■■■□□ 2.51
Tpm1-208ENSMUST00000113689 Setd1bQ8CFT2 1985 aa30.74■■■□□ 2.51
Tpm1-208ENSMUST00000113689 Efcab5A0JP43 1406 aa30.7■■■□□ 2.5
Tpm1-208ENSMUST00000113689 Rad54l2Q99NG0 1466 aa30.7■■■□□ 2.5
Tpm1-208ENSMUST00000113689 Pbrm1Q8BSQ9 1634 aaKnown RBP30.67■■■□□ 2.5
Tpm1-208ENSMUST00000113689 Grin2aP35436 1464 aa30.57■■■□□ 2.48
Tpm1-208ENSMUST00000113689 Magi3Q9EQJ9 1476 aa30.57■■■□□ 2.48
Tpm1-208ENSMUST00000113689 AqrQ8CFQ3 1481 aaKnown RBP30.55■■■□□ 2.48
Tpm1-208ENSMUST00000113689 Adgrl3Q80TS3 1537 aa30.54■■■□□ 2.48
Tpm1-208ENSMUST00000113689 Fgd6Q69ZL1 1399 aa30.53■■■□□ 2.48
Tpm1-208ENSMUST00000113689 Ccdc88bQ4QRL3 1481 aa30.51■■■□□ 2.48
Tpm1-208ENSMUST00000113689 Pcdh10E9PXQ7 1057 aa30.51■■■□□ 2.47
Tpm1-208ENSMUST00000113689 PtprkP35822 1457 aa30.5■■■□□ 2.47
Tpm1-208ENSMUST00000113689 Cep170Q6A065 1588 aa30.45■■■□□ 2.46
Tpm1-208ENSMUST00000113689 Gapvd1Q6PAR5 1458 aa30.44■■■□□ 2.46
Tpm1-208ENSMUST00000113689 Gm156Q58A37 223 aa30.44■■■□□ 2.46
Tpm1-208ENSMUST00000113689 NrkQ9R0G8 1455 aa30.42■■■□□ 2.46
Tpm1-208ENSMUST00000113689 Arhgef5E9Q7D5 1581 aa30.41■■■□□ 2.46
Tpm1-208ENSMUST00000113689 Top2aQ01320 1528 aaKnown RBP30.39■■■□□ 2.46
Tpm1-208ENSMUST00000113689 Ttbk1Q6PCN3 1308 aa30.39■■■□□ 2.46
Tpm1-208ENSMUST00000113689 AknaQ80VW7 1404 aa30.36■■■□□ 2.45
Tpm1-208ENSMUST00000113689 Pla2r1Q62028 1487 aa30.35■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms