RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 Igkv1-122A0A140T8M9 119 aa13.03□□□□□ -0.32
Snrnp40-201ENSMUST00000105994 Krtap14O08640 167 aa13.03□□□□□ -0.32
Snrnp40-201ENSMUST00000105994 5730596B20RikQ8BQ08 205 aa13.03□□□□□ -0.32
Snrnp40-201ENSMUST00000105994 Gm27235Q3UW50 83 aa13.03□□□□□ -0.32
Snrnp40-201ENSMUST00000105994 Ube2aQ9Z255 152 aa13.03□□□□□ -0.32
Snrnp40-201ENSMUST00000105994 Tmem243B2RVB9 118 aa13.01□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Gm10642Q3TWM1 71 aa13.01□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Igkv2-109A0A075B5K6 120 aa12.99□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Gm10139O88245 57 aa12.98□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 D130052B06RikQ3UW13 202 aa12.98□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Defb37Q7TMD2 62 aa12.98□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Fat3Q8BNA6 4555 aa12.98□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Igkv3-7A0A0G2JE31 119 aa12.97□□□□□ -0.33
Snrnp40-201ENSMUST00000105994 Pxt1Q8K459 51 aa12.95□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Lrp1bQ9JI18 4599 aa12.95□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Ccdc179J3QM76 67 aa12.93□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Hectd4E9Q2E4 4418 aa12.93□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Igkv1-110A0A0B4J1I0 119 aa12.92□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Fat2Q5F226 4351 aa12.92□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 9530003J23RikQ8BM26 151 aa12.91□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Vpreb3D3Z6J4 130 aa12.9□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 Mycbp2Q7TPH6 4711 aa12.9□□□□□ -0.34
Snrnp40-201ENSMUST00000105994 A0A286YE02 88 aa12.9□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Defa28D3Z1V9 94 aa12.9□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Krtap19-5O08632 62 aa12.9□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Vps25Q9CQ80 176 aa12.9□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Igkv8-26A0A075B5N5 123 aa12.89□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Vpreb2P13373 142 aa12.89□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Gm20726G3UX18 150 aa12.88□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Lrp1Q91ZX7 4545 aaKnown RBP12.87□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Defb39Q70KL3 74 aa12.87□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Ifitm6A0A1B0GS75 124 aa12.86□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Vpreb1P13372 142 aa12.86□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 HrnrQ8VHD8 2496 aa12.86□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Gm10767Q3TQP0 103 aa12.86□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 A830005F24RikQ8BRT5 167 aa12.86□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Gm7102J3QQ10 178 aa12.85□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Lamtor3O88653 124 aa12.85□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Ighv10-3A0A075B5T6 119 aa12.84□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 RetnlbQ99P86 105 aa12.84□□□□□ -0.35
Snrnp40-201ENSMUST00000105994 Igkv3-5A0A140T8M6 119 aa12.83□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Odf3bQ5M8M2 238 aa12.83□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Gtf2h5Q8K2X8 71 aa12.83□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Gm37389A0A0A6YW05 95 aa12.82□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Znf706Q9D115 76 aaKnown RBP12.82□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Gm10401E9Q3K6 71 aa12.81□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Rpl37aP61514 92 aa12.81□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Wfdc13Q5DQQ6 81 aa12.81□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Sfta2E9PXB6 77 aa12.78□□□□□ -0.36
Snrnp40-201ENSMUST00000105994 Bean1Q9EQG5 255 aa12.77□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Igkv8-27A0A0G2JF28 120 aa12.76□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Igkv8-30A0A140T8M3 121 aa12.76□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 P06320 134 aa12.76□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Herc1E9PZP8 4859 aa12.76□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Igf1P05017 153 aa12.74□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Gm45213A0A0U1RNZ6 101 aa12.73□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Cox6a2P43023 97 aa12.73□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Xcl1P47993 114 aa12.72□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Mrpl55Q9CZ83 127 aa12.71□□□□□ -0.37
Snrnp40-201ENSMUST00000105994 Gm18596A0A1W2P860 280 aa12.69□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Fam240bJ3QMB3 78 aa12.69□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Gm12353A2AGJ4 60 aa12.68□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Rbm3O89086 153 aaKnown RBP12.68□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Pde6gP09174 87 aa12.68□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Cypt14J3QPF7 87 aa12.66□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Chchd10Q7TNL9 138 aa12.65□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 A730071L15RikQ8C4X0 137 aa12.65□□□□□ -0.38
Snrnp40-201ENSMUST00000105994 Igkv8-28A0A0G2JE47 121 aa12.64□□□□□ -0.39
Snrnp40-201ENSMUST00000105994 Sprr2jO70561 109 aa12.63□□□□□ -0.39
Snrnp40-201ENSMUST00000105994 Q8BT88 171 aa12.62□□□□□ -0.39
Snrnp40-201ENSMUST00000105994 Anapc11Q9CPX9 84 aa12.62□□□□□ -0.39
Snrnp40-201ENSMUST00000105994 Gm10308Q9CVR5 141 aa12.62□□□□□ -0.39
Snrnp40-201ENSMUST00000105994 Lyrm7Q9DA03 104 aa12.62□□□□□ -0.39
Snrnp40-201ENSMUST00000105994 1700018G05RikA0A1B0GSI2 66 aa12.58□□□□□ -0.4
Snrnp40-201ENSMUST00000105994 Trav14d-3-dv8A0A075B619 120 aa12.57□□□□□ -0.4
Snrnp40-201ENSMUST00000105994 Trav3-1Q5R1I8 114 aa12.56□□□□□ -0.4
Snrnp40-201ENSMUST00000105994 Ormdl1Q921I0 153 aa12.56□□□□□ -0.4
Snrnp40-201ENSMUST00000105994 Cby1Q9D1C2 127 aa12.56□□□□□ -0.4
Snrnp40-201ENSMUST00000105994 Gm28230A0A0A0MQ91 144 aa12.52□□□□□ -0.41
Snrnp40-201ENSMUST00000105994 Lrp2A2ARV4 4660 aa12.51□□□□□ -0.41
Snrnp40-201ENSMUST00000105994 Defa25Q5G864 92 aa12.51□□□□□ -0.41
Snrnp40-201ENSMUST00000105994 Cdip1Q9DB75 208 aa12.5□□□□□ -0.41
Snrnp40-201ENSMUST00000105994 Igkv3-10A0A0G2JGN0 119 aa12.47□□□□□ -0.41
Snrnp40-201ENSMUST00000105994 Igkv3-4A0A140T8Q4 119 aa12.45□□□□□ -0.42
Snrnp40-201ENSMUST00000105994 Defb12Q8K4N3 78 aa12.44□□□□□ -0.42
Snrnp40-201ENSMUST00000105994 Gm37013Q8K491 104 aa12.42□□□□□ -0.42
Snrnp40-201ENSMUST00000105994 D6Ertd527eA0A0N4SWI3 464 aa12.41□□□□□ -0.42
Snrnp40-201ENSMUST00000105994 Igkv8-21A0A140T8P7 120 aa12.4□□□□□ -0.42
Snrnp40-201ENSMUST00000105994 Tmem213Q08EA8 116 aa12.4□□□□□ -0.42
Snrnp40-201ENSMUST00000105994 Gm44790A0A0N4SV91 103 aa12.38□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 BatfO35284 125 aa12.38□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 A530084C06RikQ3UTW2 186 aa12.37□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 Ubl5Q9EPV8 73 aa12.37□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 Gm16253D3Z167 63 aa12.36□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 Mrpl34Q99N91 92 aa12.36□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 Gm20604F8WIA3 75 aa12.35□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 UqcrqQ9CQ69 82 aa12.35□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 4930535I16RikQ9CUI2 172 aa12.35□□□□□ -0.43
Snrnp40-201ENSMUST00000105994 C130032M10RikQ8C888 123 aa12.32□□□□□ -0.44
Snrnp40-201ENSMUST00000105994 Gm21886J3QJU9 214 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms