RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 AtrQ9JKK8 2635 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Igkv3-1A0A075B5P1 119 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Ighv13-2A0A0A6YWN3 119 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 E130218I03RikA0A0U1RNU5 63 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 B230307C23RikQ8BLB2 64 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Gm17689B3GLJ4 109 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Cox7b2Q9D2H1 82 aa8.73□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Fam19a5Q91WE9 132 aa8.72□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Ufsp1Q9CZP0 217 aa8.72□□□□□ -1.01
Ssr1-203ENSMUST00000225246 Igsf10Q3V1M1 2594 aa8.71□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Igkv8-28A0A0G2JE47 121 aa8.7□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Gm17577J3QNF7 156 aa8.7□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Fam19a3Q7TPG6 132 aa8.7□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Krtap10-10A0A1W2P7T6 217 aa8.69□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Snhg11Q4G0K9 87 aa8.69□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Serp1Q9Z1W5 66 aa8.69□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Vpreb2P13373 142 aa8.68□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Trav14-1A0A0G2JF94 121 aa8.68□□□□□ -1.02
Ssr1-203ENSMUST00000225246 A730009L09RikA0A1B0GS82 72 aa8.68□□□□□ -1.02
Ssr1-203ENSMUST00000225246 BikO70337 150 aa8.68□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Defa20Q45VN2 95 aa8.68□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Cd164Q9R0L9 197 aa8.68□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Phxr5P08399 672 aa8.67□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Sprr4Q8CGN8 76 aa8.67□□□□□ -1.02
Ssr1-203ENSMUST00000225246 BaalcQ8VHV1 145 aa8.66□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Cdk2ap2Q9CPY4 127 aa8.66□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Pou2af1Q64693 256 aa8.66□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Sprr2jO70561 109 aa8.65□□□□□ -1.02
Ssr1-203ENSMUST00000225246 Hivep3A2A884 2348 aa8.64□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Igkv1-88A0A140T8N1 120 aa8.64□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Smlr1J3QMJ4 66 aa8.64□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Fn1P11276 2477 aaKnown RBP8.64□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Zfp462B1AWL2 2495 aaKnown RBP8.63□□□□□ -1.03
Ssr1-203ENSMUST00000225246 A0A286YCN5 57 aa8.63□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Camk2n2Q78WH7 79 aa8.63□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Defb37Q7TMD2 62 aa8.63□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Brk1Q91VR8 75 aa8.63□□□□□ -1.03
Ssr1-203ENSMUST00000225246 UqcrqQ9CQ69 82 aa8.63□□□□□ -1.03
Ssr1-203ENSMUST00000225246 PolqQ8CGS6 2544 aa8.62□□□□□ -1.03
Ssr1-203ENSMUST00000225246 SnurfQ9WU12 71 aa8.61□□□□□ -1.03
Ssr1-203ENSMUST00000225246 P06320 134 aa8.61□□□□□ -1.03
Ssr1-203ENSMUST00000225246 FcgbpE9Q0B5 2583 aa8.61□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Pet100P0DJE0 76 aa8.59□□□□□ -1.03
Ssr1-203ENSMUST00000225246 A330070K13RikQ8CA53 115 aa8.59□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Sfta2E9PXB6 77 aa8.59□□□□□ -1.03
Ssr1-203ENSMUST00000225246 6430550D23RikE9Q1X6 194 aa8.59□□□□□ -1.03
Ssr1-203ENSMUST00000225246 Gm10401E9Q3K6 71 aa8.58□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Vpreb1P13372 142 aa8.58□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Reg3bP35230 175 aa8.58□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Q8BT88 171 aa8.58□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Brwd1Q921C3 2304 aa8.57□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Gm3250E9Q1M3 230 aa8.57□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Gm10337F7DEP7 55 aa8.56□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Cox6a2P43023 97 aa8.56□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Itpr2Q9Z329 2701 aa8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Gm11011D3Z3L9 86 aa8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Dph3Q8K0W9 82 aa8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Gm37013Q8K491 104 aa8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Smim29Q8R043 75 aa8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Defb10Q8R2I8 73 aa8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Hspg2Q05793 3707 aaKnown RBP8.55□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Igkv3-2A0A075B5P0 119 aa8.54□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Igkv1-122A0A140T8M9 119 aa8.54□□□□□ -1.04
Ssr1-203ENSMUST00000225246 A930002H24RikQ8C8Y3 163 aa8.54□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Dmac1Q9CQ00 111 aa8.54□□□□□ -1.04
Ssr1-203ENSMUST00000225246 AplnQ9R0R4 77 aa8.54□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Gm3233E9Q2H5 230 aa8.53□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Gm11627A6PWP4 55 aa8.52□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Defa27F2Z403 93 aa8.52□□□□□ -1.04
Ssr1-203ENSMUST00000225246 Hivep1Q03172 2688 aa8.52□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Gm10570F6VB42 170 aa8.52□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Sprr1aQ62266 144 aa8.52□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Fbn1Q61554 2873 aaKnown RBP8.51□□□□□ -1.05
Ssr1-203ENSMUST00000225246 P84750 121 aa8.51□□□□□ -1.05
Ssr1-203ENSMUST00000225246 H2al1bA0A087WP11 105 aa8.5□□□□□ -1.05
Ssr1-203ENSMUST00000225246 H2al1kJ3QP08 105 aa8.5□□□□□ -1.05
Ssr1-203ENSMUST00000225246 H2al1eQ810S6 105 aa8.5□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Prr15lQ8JZM2 100 aa8.5□□□□□ -1.05
Ssr1-203ENSMUST00000225246 H2al1mQ9DAD9 105 aa8.5□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Col6a5A6H584 2640 aa8.49□□□□□ -1.05
Ssr1-203ENSMUST00000225246 A0A286YE02 88 aa8.49□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Gm16181B0V2H2 73 aa8.49□□□□□ -1.05
Ssr1-203ENSMUST00000225246 C130032M10RikQ8C888 123 aa8.49□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Prol1E9PYQ4 312 aa8.48□□□□□ -1.05
Ssr1-203ENSMUST00000225246 A530084C06RikQ3UTW2 186 aa8.48□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Igkv3-4A0A140T8Q4 119 aa8.47□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Wfdc6bF6ULY1 148 aa8.47□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Mrpl34Q99N91 92 aa8.47□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Gm37389A0A0A6YW05 95 aa8.47□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Gm12353A2AGJ4 60 aa8.47□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Kmt2aP55200 3966 aa8.47□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Megf8P60882 2789 aa8.46□□□□□ -1.05
Ssr1-203ENSMUST00000225246 Mrpl55Q9CZ83 127 aa8.46□□□□□ -1.06
Ssr1-203ENSMUST00000225246 Tex15F8VPN2 2785 aa8.45□□□□□ -1.06
Ssr1-203ENSMUST00000225246 Igkv8-19A0A0G2JFN8 121 aa8.44□□□□□ -1.06
Ssr1-203ENSMUST00000225246 Vpreb3D3Z6J4 130 aa8.43□□□□□ -1.06
Ssr1-203ENSMUST00000225246 Coa6Q8BGD8 79 aa8.43□□□□□ -1.06
Ssr1-203ENSMUST00000225246 PscaP57096 123 aa8.43□□□□□ -1.06
Ssr1-203ENSMUST00000225246 Gm16485Q8C4B7 115 aa8.43□□□□□ -1.06
Ssr1-203ENSMUST00000225246 Gm44790A0A0N4SV91 103 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 239.3 ms