Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm25239-201ENSMUST00000174915 86 ntBASIC32.4■■■□□ 2.78
Fn1P11276 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Fn1P11276 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Fn1P11276 Gm24109-201ENSMUST00000175489 103 ntBASIC28.5■■■□□ 2.15
Fn1P11276 Gm15042-201ENSMUST00000120212 883 ntBASIC27.52■■■□□ 2
Fn1P11276 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Fn1P11276 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Fn1P11276 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Fn1P11276 Gm15045-201ENSMUST00000117359 883 ntBASIC26.88■■□□□ 1.89
Fn1P11276 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Fn1P11276 Gm23366-201ENSMUST00000175022 89 ntBASIC26.8■■□□□ 1.88
Fn1P11276 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.72■■□□□ 1.87
Fn1P11276 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Fn1P11276 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Fn1P11276 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
Fn1P11276 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.49■■□□□ 1.83
Fn1P11276 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Fn1P11276 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.85■■□□□ 1.73
Fn1P11276 Gm25238-201ENSMUST00000174914 89 ntBASIC25.8■■□□□ 1.72
Fn1P11276 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Fn1P11276 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Fn1P11276 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Fn1P11276 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Fn1P11276 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
Fn1P11276 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Fn1P11276 Gm25262-201ENSMUST00000174934 133 ntBASIC25■■□□□ 1.59
Fn1P11276 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
Fn1P11276 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.84■■□□□ 1.57
Fn1P11276 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Fn1P11276 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.71■■□□□ 1.55
Fn1P11276 Gm26115-201ENSMUST00000175605 87 ntBASIC24.62■■□□□ 1.53
Fn1P11276 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.6■■□□□ 1.53
Fn1P11276 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.54■■□□□ 1.52
Fn1P11276 Gm8109-201ENSMUST00000194076 746 ntBASIC24.49■■□□□ 1.51
Fn1P11276 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Fn1P11276 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Fn1P11276 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Fn1P11276 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.36■■□□□ 1.49
Fn1P11276 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Fn1P11276 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Fn1P11276 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Fn1P11276 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.19■■□□□ 1.46
Fn1P11276 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Fn1P11276 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.11■■□□□ 1.45
Fn1P11276 Gm27325-201ENSMUST00000175467 74 ntBASIC24.08■■□□□ 1.45
Fn1P11276 Rab21-202ENSMUST00000218831 843 ntBASIC24.07■■□□□ 1.44
Fn1P11276 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Fn1P11276 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Fn1P11276 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Fn1P11276 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Fn1P11276 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.92■■□□□ 1.42
Fn1P11276 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Fn1P11276 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.83■■□□□ 1.41
Fn1P11276 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Fn1P11276 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.82■■□□□ 1.4
Fn1P11276 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Fn1P11276 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Fn1P11276 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.72■■□□□ 1.39
Fn1P11276 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Fn1P11276 Gm24804-201ENSMUST00000174982 85 ntBASIC23.62■■□□□ 1.37
Fn1P11276 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Fn1P11276 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Fn1P11276 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Fn1P11276 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Fn1P11276 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Fn1P11276 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Fn1P11276 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.45■■□□□ 1.34
Fn1P11276 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Fn1P11276 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.34■■□□□ 1.33
Fn1P11276 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Fn1P11276 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.33■■□□□ 1.32
Fn1P11276 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fn1P11276 Zfp131-205ENSMUST00000223812 663 ntBASIC23.31■■□□□ 1.32
Fn1P11276 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.29■■□□□ 1.32
Fn1P11276 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fn1P11276 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fn1P11276 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fn1P11276 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Fn1P11276 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Fn1P11276 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.14■■□□□ 1.29
Fn1P11276 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fn1P11276 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Fn1P11276 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.1■■□□□ 1.29
Fn1P11276 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Fn1P11276 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Fn1P11276 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Fn1P11276 Gm27322-201ENSMUST00000184007 104 ntBASIC23.01■■□□□ 1.27
Fn1P11276 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Fn1P11276 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.98■■□□□ 1.27
Fn1P11276 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Fn1P11276 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Fn1P11276 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.94■■□□□ 1.26
Fn1P11276 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.92■■□□□ 1.26
Fn1P11276 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Fn1P11276 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Fn1P11276 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.88■■□□□ 1.25
Fn1P11276 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Fn1P11276 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Fn1P11276 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.77■■□□□ 1.24
Fn1P11276 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms