Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Gm25239-201ENSMUST00000174915 86 ntBASIC22.43■■□□□ 1.18
Smim29Q8R043 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smim29Q8R043 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smim29Q8R043 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smim29Q8R043 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smim29Q8R043 Psd-208ENSMUST00000224556 2034 ntBASIC20.51■□□□□ 0.87
Smim29Q8R043 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim29Q8R043 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim29Q8R043 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim29Q8R043 Gm15042-201ENSMUST00000120212 883 ntBASIC20.02■□□□□ 0.8
Smim29Q8R043 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim29Q8R043 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim29Q8R043 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim29Q8R043 Gm15045-201ENSMUST00000117359 883 ntBASIC19.69■□□□□ 0.74
Smim29Q8R043 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.67■□□□□ 0.74
Smim29Q8R043 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smim29Q8R043 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smim29Q8R043 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smim29Q8R043 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim29Q8R043 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim29Q8R043 Gm24109-201ENSMUST00000175489 103 ntBASIC19.26■□□□□ 0.67
Smim29Q8R043 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim29Q8R043 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim29Q8R043 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim29Q8R043 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim29Q8R043 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smim29Q8R043 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim29Q8R043 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smim29Q8R043 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.05■□□□□ 0.64
Smim29Q8R043 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smim29Q8R043 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smim29Q8R043 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smim29Q8R043 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smim29Q8R043 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.91■□□□□ 0.62
Smim29Q8R043 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smim29Q8R043 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smim29Q8R043 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smim29Q8R043 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.75■□□□□ 0.59
Smim29Q8R043 Gm23366-201ENSMUST00000175022 89 ntBASIC18.74■□□□□ 0.59
Smim29Q8R043 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim29Q8R043 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim29Q8R043 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim29Q8R043 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim29Q8R043 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smim29Q8R043 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.56■□□□□ 0.56
Smim29Q8R043 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smim29Q8R043 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smim29Q8R043 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.52■□□□□ 0.56
Smim29Q8R043 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.5■□□□□ 0.55
Smim29Q8R043 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smim29Q8R043 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.44■□□□□ 0.54
Smim29Q8R043 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smim29Q8R043 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Smim29Q8R043 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smim29Q8R043 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smim29Q8R043 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim29Q8R043 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim29Q8R043 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim29Q8R043 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.15■□□□□ 0.5
Smim29Q8R043 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim29Q8R043 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim29Q8R043 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.13■□□□□ 0.49
Smim29Q8R043 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim29Q8R043 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smim29Q8R043 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smim29Q8R043 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smim29Q8R043 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim29Q8R043 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smim29Q8R043 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smim29Q8R043 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smim29Q8R043 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Smim29Q8R043 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim29Q8R043 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smim29Q8R043 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim29Q8R043 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.81■□□□□ 0.44
Smim29Q8R043 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim29Q8R043 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim29Q8R043 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim29Q8R043 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smim29Q8R043 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.72■□□□□ 0.43
Smim29Q8R043 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim29Q8R043 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim29Q8R043 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim29Q8R043 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim29Q8R043 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim29Q8R043 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smim29Q8R043 Gm27325-201ENSMUST00000175467 74 ntBASIC17.63■□□□□ 0.41
Smim29Q8R043 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim29Q8R043 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim29Q8R043 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim29Q8R043 Gm25238-201ENSMUST00000174914 89 ntBASIC17.59■□□□□ 0.41
Smim29Q8R043 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smim29Q8R043 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smim29Q8R043 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smim29Q8R043 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smim29Q8R043 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim29Q8R043 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smim29Q8R043 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smim29Q8R043 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smim29Q8R043 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms